fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G21330 bHLH087 basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.1)

>AT3G21330.1 genomic map

>>Show CDS map




Uncut enzymes: ApaI, AscI, KpnI, NcoI, NotI, SmaI, StyI
Name Recognition sequence Cut positions
BamHI G|GATCC 5310
BglII A|GATCT 547
EcoRI G|AATTC 5784
EcoRV GAT|ATC 2595, 3443, 5301
HindIII A|AGCTT 5071, 5465, 5488, 6548
HpaI GTT|AAC 2193, 3820
NdeI CA|TATG 3567
NheI G|CTAGC 4717
PacI TTAAT|TAA 6924
PstI CTGCA|G 4859
PvuII CAG|CTG 4650
SacI GAGCT|C 1692, 4070
SalI G|TCGAC 7141
SpeI A|CTAGT 1467, 2113, 3716, 3854
XbaI T|CTAGA 3169
XhoI C|TCGAG 675, 4592


Click here to view TAIR data

>AT3G21330 genomic sequence (4480-5601,) length:7435
ggaaagaaaa aagttaaaaa caaaaacaaa aacgaaaaaa aagttttaga 
50
tcctctttaa ccaaaaaaaa agaaagaaaa gaaaagaact tctgtgagtc 
100
cccacaatat gacgccatgc tgatttccca cgtgggacta ctatcctcca 
150
agatcacaac caattacgaa gagccacgtg cttatggaga acgttgtgtt 
200
cacgtgtgaa ccattcaata atggaaggga gagagcaaga gccaagaaga 
250
gtgaagaaga gtcagatagc ttagattact gtacagctcc ggtctggacc 
300
atttaaaccg taccgagcca aagtatctga aagagaaaga atgttatcgg 
350
tttctaaaaa tgtcgtcgtc ttgctcttta actcctagaa attttgtttc 
400
atgttttgtt ttgacatgta tatgtgataa tggaccactt tcatctctta 
450
atcatgggtg cagaatcatg gacatacccc cgacaaatcc tttatttcta 
500
tttatacact ataatctctt tatgctattc ataaagaaac attaagagat 
550
ctaaacttat cgtttattct ataaacccta gctagaatct acatgcaaat 
600
tccattgggg taagttaagt acgtacgttt cagtctacgc gttaattttt 
650
tttgtagtgt ttatcacaat tagactcgag ttgacttatt aaaccgacat 
700
ggtcggtttc tttcaatttt ggtacattgg atcggtccat gaccgtggga 
750
agtcaaattc gtcaattaat ttgagaagtt gttctcgacc gacatttttg 
800
gttcccgatt gaggtgtgag aattagttaa tactgatttg agaatttttg 
850
ttttttatgg gtctcccaat taatatacgt tttggtatta ttcaaaaaaa 
900
aaaattggag ttcacatata tggacaaaat aaggtctctt tcgttgtgag 
950
tatcctaagg atgtcaacaa ctgtgaatgt gatgttgatc ttcatttacc 
1000
cattttcttc tacatagacc attaattatg gttatatgat ttaatgcaaa 
1050
atgaatccca ttatgctatc cttaagtatt tctatatata tatatatata 
1100
tgatttacat attaatttga catttttaga ataattattc tgaaatgaag 
1150
atatatacat ttctattaaa atgttaaata ttgtagaaca ctaggtacgt 
1200
agattggtat tacacatttt aagtctcaac attggactaa cgagtttgat 
1250
catctaatct atatttacaa agtgtataca agtagaaatt caataaaaat 
1300
ggtgaggtcg gtagattggt agtatgagga gattaaatta ggtaattgac 
1350
tatgtatttt tttcttttct ttttgcaaat aaaaaagttt tgaaaattaa 
1400
aaatagattg ttattcttct aattattctt gccatatatt tagtgcatta 
1450
ttcatatact ctaaaaacta gtaattaaga ctgtagtgga gatttctgtt 
1500
ggtaatgatt taaagtgctt ttacagttgt tatttagggt tttagaattt 
1550
tatagctaca agtatttcat ctataacatg ttattacatt tttttttaat 
1600
aatctgtatg ttcttgttct tcagtgaata ttgtttatag aattattttg 
1650
gttaattcgt tataaagttt atggattgat tggtgattac agagctcagt 
1700
tgtatgacct agccactatg ataaatccac caacattcga aagtagaacg 
1750
tagaaggtaa gtgaaaatca tgatataaat tacaaagttg acaattataa 
1800
aagaaaaata aaaattgaat gagctgtggg attatggtag acatgtggtt 
1850
gggcagagag gtcatgtcgc cttctttgct ctctctttct ctccgttcta 
1900
ccgattgcga tgttttgtat aattaccctc aaaccaaagc tcttctttta 
1950
ttcccgcact gatgttgcta tattttcata gccccacaaa atttccatat 
2000
aattttggtc tcaattaatg atagaaaatc cttaagtttt attttttctt 
2050
tctttcatga gatcataaaa taaacaaact acagtattgt caaacatcat 
2100
ttacgaagaa aaactagtta ataattacca acaaatttgt agtaactata 
2150
accgattaat ttgacattgc caaacatcaa aaaaaaaaaa ttgttaactt 
2200
taagatgatc ttttactatt atagacggat caccgactta tgtgacggtt 
2250
aaactactaa tggattagtg tggattagtg acgactttga ataaaaatag 
2300
gaactagaaa gttatcaata ttgtaaaaga atgttcaaaa tttacaatta 
2350
gtatctcaaa ttataaatac tactacaaat tgttcttaca tagtaaagat 
2400
ataagttcat acaaatatac aataaaacta tattggcgtt attggtttag 
2450
gttctcgaat gttggttatt tcaagcctaa ggaggaacga cttgggaaat 
2500
aagaagcgac taataatgta cttctctact ggtatatgga aattacaaag 
2550
ttttcgaaaa ctactccaaa aagtgttcca catcgattat atatgatatc 
2600
atgattatat ataatcaaat aaatccacaa aaagagtgtt tggtattttt 
2650
atataacacg ttctagccaa aagaaatgaa gataaactat acaagaaagt 
2700
gttgctagat agatcgagat gaggatattg atcattattg actgatgatg 
2750
atagcgaaaa ggtaaattaa acaaacacat agaaaagaat aagaaaatgg 
2800
tatagataat agaatcatga attactttta cagcttgatc atttttaaaa 
2850
taaaatatac aatcaacatt aatctgttat tcaccaaaaa ataaaagatc 
2900
caaaacctaa aactttcttt cgatctctcc cttaaagttt tcagttcgca 
2950
cgacgctaaa aggattgtca gtcctttttc tctgctcaag cactcgtaga 
3000
tttttaatta catatccctt ttcagtattc atcaagtgca taatcatata 
3050
gtctatgatt tttatcaagt attatatcta ttttctaggg tttcaaaaaa 
3100
agatgctctt cgattgcaga aactattatg cacaccaacc tcatttaaat 
3150
aaatatataa ttcaatcgtc tagattattt tctatatttt aatacaaatc 
3200
attcggttag ctttaggtta atgaatcagt gatctcactt ttctctttgc 
3250
gcgtgtgaca ttatttttga ccatgaaaaa ttaaataatt ttggattaag 
3300
aaattattaa ataatccggt ttaggagatg ttttaagttt agattcggga 
3350
gtgttgtaaa ctctaacgtt tagtttcggt gacaactttt aaattcaatt 
3400
ttgatagtcg tgtatctatt atccaacaaa atctcactta gagatatcag 
3450
atatatcgca aaattaatcg agatcaactt caatagtttc atcttctacg 
3500
aaagtaaagt tgtcgccgcc ggcgtcttca atttaacgtg tcgataacgt 
3550
tccatattcg agtttgcata tgcatgtcac tggaaataat agttaaatca 
3600
tctaaatcgc atccattaat gatttgatca tcataaaatt tggtaaaaaa 
3650
attacctaac tcaaaagtaa aatataaaaa ttaatcgttt gagtagttaa 
3700
ttagtttacc ggtatactag ttaaaagttt ttttcctttg acggcgctca 
3750
tatatatgtt ttaaagtata tcaaaatagg gatttaattc ttaaagttac 
3800
actaatccta attcttaaag ttaaccatcc ataccaattt acagaagtac 
3850
agaactagtg cttgatacag aggaacaatt gatctcatcg aaagttggga 
3900
cctttttaaa aataatacta ttatatatat ataataaata tacaaatata 
3950
tttaatattt attctatata taaatatgtg cataataaca aatctgagta 
4000
tgaatagtag gaggggtgta tagggctttc aagtcttttc ttacagaaac 
4050
tatctataac tctagcagag agctcattat agaacagaac agaaacagag 
4100
ctttctaagt ctacagcaca gaaataaacc tcatttacag actgttttac 
4150
tttctttcct ttttgagcat ttcttctttc tgtttctttc ctctgttttc 
4200
tctttctttc cctttttggg tgtcatctct ttaagacaga agaaacgttt 
4250
ctcagagttt cctgtgaact catctgtttg ttctcttctt ccggtttcac 
4300
tttttcatgt cctgccgtta ttacaacgag gttggtttaa agatcagctt 
4350
ttatcatttt tccctgcatg taacaagaaa tatttaggtt tcatgtctgt 
4400
ttacaaatat gctctgtttc taagtatgcc tctcacattt gtctttgttt 
4450
tgggtgtttt taggattgtg tttgatccgA TGGAAGGATT GGAATCTGTG 
4500
TACGCTCAAG CTATGTATGG AATGACACGA GAGAGCAAAA TCATGGAGCA 
4550
TCAAGGATCA GATTTGATTT GGGGAGGAAA TGAGCTAATG GCTCGAGAAC 
4600
TCTGTTCTTC TTCTTCTTAT CACCACCAAC TCATTAATCC GAATCTTAGC 
4650
AGCTGTTTCA TGTCTGATCT TGGAGTCTTA GGTGAGATTC AACAGCAGCA 
4700
ACATGTTGGC AACAGAGCTA GCTCGATAGA TCCATCATCA CTCGATTGTT 
4750
TGTTATCTGC GACGTCGAAT AGCAACAACA CCTCGACGGA GGACGATGAA 
4800
GGAATATCTG TGCTTTTCTC AGATTGTCAG ACTCTTTGGA GCTTTGGTGG 
4850
AGTCTCATCT GCAGAGTCTG AGAACAGAGA GATCACTACT GAGACGACAA 
4900
CAACGATAAA GCCTAAGCCT TTGAAGAGAA ACAGAGGAGG AGATGGAGGA 
4950
ACTACTGAGA CTACAACAAC AACAACAAAA CCTAAGTCTT TGAAGAGAAA 
5000
CAGAGGAGAC GAGACAGGAA GTCACTTTAG TCTTGTTCAT CCTCAAGATG 
5050
ATTCGGAGAA AGGAGGTTTC AAGCTTATAT ACGATGAGAA TCAATCGAAA 
5100
TCAAAGAAAC CAAGAACAGA GAAAGAACGA GGCGGTTCTT CGAACATTAG 
5150
TTTCCAACAT TCAACTTGTT TGTCTGACAA TGTCGAGCCC GATGCTGAGG 
5200
CGATTGCACA AATGAAGGAG ATGATATACA GAGCGGCTGC ATTTAGACCG 
5250
GTGAATTTCG GGTTAGAGAT TGTGGAGAAG CCTAAGAGGA AGAACGTCAA 
5300
GATATCGACG GATCCTCAAA CGGTTGCAGC GAGACAGAGA AGGGAGAGGA 
5350
TAAGTGAGAA GATTAGGGTT TTACAAACAT TGGTTCCAGG TGGGACGAAG 
5400
ATGGATACTG CATCAATGCT TGATGAAGCT GCTAATTATC TCAAGTTCCT 
5450
TAGAGCACAA GTAAAAGCTT TAGAAAACTT GAGACCCAAG CTTGACCAAA 
5500
CCAATCTCTC TTTCTCTTCT GCTCCTACAT CGTTTCCATT ATTCCACCCA 
5550
TCTTTTCTTC CATTGCAAAA TCCTAATCAA ATCCATCATC CAGAGTGTTG 
5600
Acagattata aacttttgag tttcatcatc atcaacagaa tcatggcgtc 
5650
ttgattgttt tagcagttct caagaaaggc aacttctgtg acaagggtgg 
5700
tgtcgggcag tgttgtttac actttccagt ctttgttttg catttctttt 
5750
tatataaagt ttgtatttta tatagaatct gtggaattcg agggttgaaa 
5800
tattgtgaaa aacagagccg caagaggtta attacagtct ctgcaatatt 
5850
ttcaaccttt tattacttta ttagagtaaa gatagcgtaa gataattgca 
5900
attatgaagc gatgattatc aacaaaagtg tttagaaagt gcctccatct 
5950
ctctctactt aaaaaagttt agctttactt gaagaactct tttggagtac 
6000
taaaatataa aattaatatt catcctcttt ttttggtact caataaactc 
6050
tgtctgtctc tgtaaaatat gtataaattt cgtatatcta taatgcaagg 
6100
ttatttaatt tgtgttactt atccatataa aaaaacgatt ttagtggaag 
6150
aacttattat tgtcttataa ttttattttc acataagtgt ttttttgtct 
6200
ggctcaaata caaaacatag tttggatgga gtttagtaag agttaagaat 
6250
gttgaaggcg tgcaccttga gaatataact tcacctgact cgtacaccct 
6300
aaaatgctca ccacatgctt ctctatctca ctctccatct ttttattctt 
6350
cttttttgtc ttttggtttt tgtcttattt cgtccctaaa tctccttaat 
6400
cacattctct ttcgtttaat agtattttat gaagttcttt tgatggatgt 
6450
gtttttttga cttgggtaca ttgactatca actttttatt tattcgcaat 
6500
aacacttact taattgctat tttcaaaata acatgctatt ttgttctaag 
6550
cttggtttac attaagaaag taacatgctc ttgagctggc ttgttaatta 
6600
tccgcgtatt tcaccaaacc caattaaatg aatgttcaaa acataaaaca 
6650
tgttatttga atatgaaaat gtgaacattg gtactctata caaggaacta 
6700
tatttttgta atgtgtttaa ttccgtattt taaaatgttt gtgcctattg 
6750
cgtcgccaaa agaacacaca aacatataac aattttaatt ttgttttccg 
6800
catgtaagta tatagggcag gaatggtttt tcttggagca tgcctatatt 
6850
tctgttttat tatttgattg tctatgaaaa tctttgtaga acgtgaactc 
6900
catagaagag aagaaaacgg tttaattaaa ctaaaccaag tttccatttg 
6950
gaagagtctc ataaggccta ttgcaaccag ctattggaaa gaattaaaat 
7000
ccatcttgta atataatacc atagtagtca ttttttgtgt tcttaaaatt 
7050
aaattagtta tcaacccaat gaagcaatcg aagatgcaac cgactaggtc 
7100
tggacgtttg gtagtttctt atgaaaagaa aggtaacaat gtcgactaac 
7150
aacatttgaa gtcaaaatga ttaagtagat aaaatataat tccgttattt 
7200
aatatcataa aatcatatat tcaagttgac tccaaattac aaacagaaaa 
7250
ctctaaaaag caattatgta gtatgtaaaa gtttagtata taataatcaa 
7300
aagaaaaagt caggattcga tgggtgttgc aagctgggga gataagagag 
7350
attgatcatt catgttgact tttttaattg aacggttatg gccttttgtt 
7400
tgtttccatg taacatttta gacaaagatg tccct
7450