Locus |
Common name |
Short description |
AT3G22100 |
bHLH117 |
basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.1) |
>AT3G22100.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XhoI
Name |
Recognition sequence |
Cut positions |
BglII
| A|GATCT |
434 |
EcoRI
| G|AATTC |
660 |
HindIII
| A|AGCTT |
352 |
XbaI
| T|CTAGA |
504 |
Click here to view TAIR data
>AT3G22100.1 length:759
ATGGAGACAC CAGCTTACGA TTTCGACTCA CTCACTGACT TACCACCGCT | 50 |
TCCTCCTTCC GATTTCACTC CTTCCAACGC CTTCACCTTC CCCGACCACA | 100 |
ACCTCGACTT TTCCTTCCTC GACTCCACTC TGTCTCTCCT CAATCGGCAC | 150 |
CATCTCTCTG AGTCCACTCG CTTGGAACAG ATTTTTTACG ACTCCACTCA | 200 |
CACTCAGCTC TTTCACAACG ACGACACCAC CACCACCACC ACACCGTTTC | 250 |
TCCACCTTCC TGATCTCAAA TCCATCGACG CCGTTGAAGA ACCGACGACG | 300 |
ATGAAGCTGT TTCCATCTCT CTCTCCTCCT CTTCCCGCCG CCAAACGTCA | 350 |
GAAGCTTAAC TCAACTTCCT CTTCAACAAC CTCTGGATCT CCAACTGCGT | 400 |
CAAACGACGG TGGTATTATT ACCAAACGAC GGAAGATCTC AGACAAAATC | 450 |
AGATCCCTGG AGAAACTCAT GCCGTGGGAG AGAAAGATGA ACTTAGCGAT | 500 |
GACTCTAGAA GAATCTCACA AATACATCAA GTTTCTTCAA TCTCAGATTG | 550 |
CTTCACTCCG TTGGATGCCT CTCGAATCTG TCTACAACAC CGCCGGTGAA | 600 |
GTAGGAGAAA CAGATTTGCT CAAATCTCTG ACACGTCAAC AGATTCTTCA | 650 |
GGTTCTTGCG AATTCTCCAG GCTCACGAAA CGTACTCTCC TCTCGTGGTG | 700 |
TTTGTGTCTT CTCTTATGAA CAGCTTCTCT CTCTCAAGAC AATGTCGAGA | 750 |
AACCTCTGA | 800 |
>AT3G22100.1 longest ORF length:252
METPAYDFDS LTDLPPLPPS DFTPSNAFTF PDHNLDFSFL DSTLSLLNRH | 50 |
HLSESTRLEQ IFYDSTHTQL FHNDDTTTTT TPFLHLPDLK SIDAVEEPTT | 100 |
MKLFPSLSPP LPAAKRQKLN STSSSTTSGS PTASNDGGII TKRRKISDKI | 150 |
RSLEKLMPWE RKMNLAMTLE ESHKYIKFLQ SQIASLRWMP LESVYNTAGE | 200 |
VGETDLLKSL TRQQILQVLA NSPGSRNVLS SRGVCVFSYE QLLSLKTMSR | 250 |
NL | 300 |
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