fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G22100 bHLH117 basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.1)

>AT3G22100.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 434
EcoRI G|AATTC 660
HindIII A|AGCTT 352
XbaI T|CTAGA 504


Click here to view TAIR data

>AT3G22100.1 length:759
ATGGAGACAC CAGCTTACGA TTTCGACTCA CTCACTGACT TACCACCGCT 
50
TCCTCCTTCC GATTTCACTC CTTCCAACGC CTTCACCTTC CCCGACCACA 
100
ACCTCGACTT TTCCTTCCTC GACTCCACTC TGTCTCTCCT CAATCGGCAC 
150
CATCTCTCTG AGTCCACTCG CTTGGAACAG ATTTTTTACG ACTCCACTCA 
200
CACTCAGCTC TTTCACAACG ACGACACCAC CACCACCACC ACACCGTTTC 
250
TCCACCTTCC TGATCTCAAA TCCATCGACG CCGTTGAAGA ACCGACGACG 
300
ATGAAGCTGT TTCCATCTCT CTCTCCTCCT CTTCCCGCCG CCAAACGTCA 
350
GAAGCTTAAC TCAACTTCCT CTTCAACAAC CTCTGGATCT CCAACTGCGT 
400
CAAACGACGG TGGTATTATT ACCAAACGAC GGAAGATCTC AGACAAAATC 
450
AGATCCCTGG AGAAACTCAT GCCGTGGGAG AGAAAGATGA ACTTAGCGAT 
500
GACTCTAGAA GAATCTCACA AATACATCAA GTTTCTTCAA TCTCAGATTG 
550
CTTCACTCCG TTGGATGCCT CTCGAATCTG TCTACAACAC CGCCGGTGAA 
600
GTAGGAGAAA CAGATTTGCT CAAATCTCTG ACACGTCAAC AGATTCTTCA 
650
GGTTCTTGCG AATTCTCCAG GCTCACGAAA CGTACTCTCC TCTCGTGGTG 
700
TTTGTGTCTT CTCTTATGAA CAGCTTCTCT CTCTCAAGAC AATGTCGAGA 
750
AACCTCTGA
800

>AT3G22100.1 longest ORF length:252
METPAYDFDS LTDLPPLPPS DFTPSNAFTF PDHNLDFSFL DSTLSLLNRH 
50
HLSESTRLEQ IFYDSTHTQL FHNDDTTTTT TPFLHLPDLK SIDAVEEPTT 
100
MKLFPSLSPP LPAAKRQKLN STSSSTTSGS PTASNDGGII TKRRKISDKI 
150
RSLEKLMPWE RKMNLAMTLE ESHKYIKFLQ SQIASLRWMP LESVYNTAGE 
200
VGETDLLKSL TRQQILQVLA NSPGSRNVLS SRGVCVFSYE QLLSLKTMSR 
250
NL
300