fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G22100 bHLH117 basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.1)

>AT3G22100.1 genomic map

>>Show CDS map




Uncut enzymes: ApaI, AscI, BamHI, HpaI, KpnI, NheI, NotI, PacI, PstI, PvuII, SacI, SmaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 4434, 5805
EcoRI G|AATTC 4660
EcoRV GAT|ATC 1483, 3912
HindIII A|AGCTT 2070, 4352, 5085, 5131, 5306
NcoI C|CATGG 319, 3624
NdeI CA|TATG 1025, 1788, 2640
SalI G|TCGAC 3765
SpeI A|CTAGT 2588
StyI C|C[AT][AT]GG 319, 2568, 3624
XbaI T|CTAGA 4504, 5637


Click here to view TAIR data

>AT3G22100 genomic sequence (4001-4759,) length:6258
ctccgcaaac aaaaatgatg ctttattatt acgttagatg gcataacaaa 
50
tagttcaaat aaatatttac tttccaaaaa acataaatag ttacaatact 
100
attcaaaaaa aaacaagaaa atagctgtta ataaacgagg caccgcaata 
150
atagagtcta aaaatagcat tcgttagaca acaaaaaaat attctaaatt 
200
ttttttttaa taacaaaaat aaatgttaaa taataatata aataaaataa 
250
aataaaagtg tgatttggtt tcaactgctc atgcactgaa gctcctccta 
300
acgtggtgag caaaaaagcc atggaacggg gctcacgtga cttatactct 
350
gaaaggacat ttataccctg aatatcaata ggtatttaca gctattggcg 
400
taactggccc atttgagtgc ccaatagtgt tgttttatga gacacttctt 
450
ccagagtatt agcccatctt acttacataa ttgggaaatt agggtgtatt 
500
tcggataaac taaactacga ggaaaaaatt gaggcgtagt atggcttctt 
550
tttattggtt tggattcaag ctatattaaa taagtcacat caatcaaaga 
600
aatatgttga cgaagaaacc caaagaaaat ctaaaacaaa agttataaaa 
650
ccaaactgaa atccggctac taggtaatag ctagacagag aggagtttaa 
700
atgttaagga cctaaaggtg cttacgtgag acaccaatat tgctcacgtg 
750
gtgtaaaacc taataaagta attgcaattt tatcatttgt acgttagaga 
800
aattaaaaag gctcatcaag atatataata ctaaagaatc tgttaattta 
850
cttagtaagt tggtatagca ttaacaatat accaatttaa aactaaatgg 
900
atcaaccaat gtattgcagt gactcacaag tcacgacgtt ctctatcaaa 
950
ttaaactaat gaacccttgt gttgtacgac actactatat gtgtgattgt 
1000
gtgtagtggc cacatcgatc agtccatatg tattcttttg tttttgtgat 
1050
agaaaaagaa attttatgta taataatcca tgagttttgg gtcatgtggt 
1100
catgtcatct cctacctttt gcttgaatat gctttggagg gatcggattc 
1150
ctacttttgt tcctacgtat tttaagatta tgaaaatgac gatcatttct 
1200
cacaatcaca ttaaaaataa cacaccttat catcaactta tatgttattc 
1250
atgtaacaga acactgagtg taattaaaaa cagaacacat tgcatatttg 
1300
cttcatttgt tgctcatgaa tgatgtgaaa tgattctata taacttgctt 
1350
ttgaaaagaa actggattaa atcaaggtgg tattggataa acggagcatc 
1400
ttaggagaga tattgagtta ttaaacgaac atattttgct acaaccatat 
1450
acttaagtaa catctagtta tgtcattatg cggatatcac acttttactt 
1500
ggtttaagaa tgttatatga attgaatatt cttcagaaaa atatgtcaaa 
1550
ggttttggga agtgcgacca aaaaaaatgt tttgggaaat gtatttctct 
1600
ctctttttac accggagaaa atggacgaca cggacaaaaa aaagaaacca 
1650
aaagaaaatg ctttagtaac acaaattaca aatttgaaat gtaaagatga 
1700
tattgctaaa tttaacgggc attgtggccc aaatctcttc gttttcgatc 
1750
caaacactcg tccatagctc ttttcccccc caacaaacat atgacccatt 
1800
ttgaaagaca cttaaaagag cacctagaaa tctataaaat cgactaaaag 
1850
acatgcaata agaaaataaa taaatggtca ataagaaaat aaattttaaa 
1900
aactgaaaat tacagtttag attttggatt acgtcaatga tgaaagttat 
1950
actgacatgt tttacccact gaaacatggc attaaattct tgcaactgca 
2000
aaacatacat gatttaggcc aactccaata ggactctaaa acaccatttt 
2050
agtgtaattt ttgcactaaa agctttccaa tggaactcta aaatgcacac 
2100
cattttagtg taatgctaca gtgttacatc aaatttggtc tgatactatt 
2150
cacaactcta aacactattc acttattata tcaataaaaa ttcaattaac 
2200
aaatataaaa ttacaaatga ttaatagata taaaatataa aaatgaatgg 
2250
atacattaat atattatatc tcttgaaata gtttatttag ttatgatatt 
2300
tttatattat tatgtatgaa aatactcaaa atagttacaa ttttatgtat 
2350
ttttaaatat atatttcaat gtactatgtt tataatgtta tgtaattcta 
2400
tactaataat aaatactaat caaaactatt aaataataaa agaaatcttt 
2450
taaatagata atataatagt attttttttt ttagtgtgat ttttggtgtt 
2500
atgattggag agaacacaag ttttaatgct aaaaatggtg taatttgaac 
2550
accaaaatgg tgttgagcct tggagatgcc cttagtaact agtcactatc 
2600
gccaaaaact acaaaaccaa caatagcttt tttcctaatc atatgtgttc 
2650
aggtttacat acttttaaaa tactgcattt agagcattaa caaaaaaaaa 
2700
tgaatttaga taacacaaat gtcgtgcaat aataataata atgcataagt 
2750
ttaaactatt gtcatcaata atctcgaccc cagatgatat tgctttaatt 
2800
agtgggcttc ttggcccaaa tagtaacaat cattttcttt ccgttcgact 
2850
tcaaaaaata tcatttttgc cgtcatggaa gttttttttg ttgttgttaa 
2900
aacccgtcat ggaagtttta tacataaatg agtcaaactt tgaccttgtg 
2950
aatttattta ccacttacca tctcaaagtt tacaagattt gttacagtgg 
3000
ttaaaaacac accatccatt ttacaacagt taggtaactt tctcttttat 
3050
ttaccaagtt ccccttccca agaaaacacg ttcttatctg tgccaatcgc 
3100
tttctccaat ttcttatgta tattatataa tctgtatatg tcttttcttt 
3150
ttttaacaaa gtcagtaata tagcattttt tattttggtt ggaaaaaggc 
3200
ttaatagatt atgttttgtt tgtttttttc tcttgtagat gaaaacgttg 
3250
aattattgtt agtgtctttc ttctttcttt ttctggataa aaatcctaat 
3300
aaaaaagata aaatcatgaa attaatactt aatgtctttg acactttgtt 
3350
ctcaaattca aattatcaaa gcaaattaag cactctaatt ttgtggaaag 
3400
taatttacat tttgagcaat ttctattctt ttgattacaa tcacgaatag 
3450
aaagtaacta aaaaaaatac atttcaaatc tctttaacag aaacttttgc 
3500
agtcacggtt ggagaaaagt aacgtggcta tcgcccccga aaaaaaaaac 
3550
ttttcagtaa catcattacg atggcacaat ccgtaaatca gaatttgttt 
3600
cgcaacctga caaacatccc tgtccatggg atcagtatca tctgatcgta 
3650
aacataatcc aacgttccat attcaatcag tacaataccc cgaaacaatc 
3700
caacggccca gattccataa gtacaatacc ctgaaaccgc ctgacgaggg 
3750
tcgcgcgaca aacagtcgac aaaaaacata taacggaatc gtcttcgttc 
3800
ctcgtgtcgc cgcctcctct tcaacaccca atcaccacaa tccacgtgta 
3850
tatctctctt ttcttaatta tttctttctt ctatctccac ccaataatca 
3900
caagccacgt ggatatctct ctgttttatt ctcttcttca cacagtcacg 
3950
catcattctc attttctcct ctctctgttt tttccctttc gccggagaaa 
4000
ATGGAGACAC CAGCTTACGA TTTCGACTCA CTCACTGACT TACCACCGCT 
4050
TCCTCCTTCC GATTTCACTC CTTCCAACGC CTTCACCTTC CCCGACCACA 
4100
ACCTCGACTT TTCCTTCCTC GACTCCACTC TGTCTCTCCT CAATCGGCAC 
4150
CATCTCTCTG AGTCCACTCG CTTGGAACAG ATTTTTTACG ACTCCACTCA 
4200
CACTCAGCTC TTTCACAACG ACGACACCAC CACCACCACC ACACCGTTTC 
4250
TCCACCTTCC TGATCTCAAA TCCATCGACG CCGTTGAAGA ACCGACGACG 
4300
ATGAAGCTGT TTCCATCTCT CTCTCCTCCT CTTCCCGCCG CCAAACGTCA 
4350
GAAGCTTAAC TCAACTTCCT CTTCAACAAC CTCTGGATCT CCAACTGCGT 
4400
CAAACGACGG TGGTATTATT ACCAAACGAC GGAAGATCTC AGACAAAATC 
4450
AGATCCCTGG AGAAACTCAT GCCGTGGGAG AGAAAGATGA ACTTAGCGAT 
4500
GACTCTAGAA GAATCTCACA AATACATCAA GTTTCTTCAA TCTCAGATTG 
4550
CTTCACTCCG TTGGATGCCT CTCGAATCTG TCTACAACAC CGCCGGTGAA 
4600
GTAGGAGAAA CAGATTTGCT CAAATCTCTG ACACGTCAAC AGATTCTTCA 
4650
GGTTCTTGCG AATTCTCCAG GCTCACGAAA CGTACTCTCC TCTCGTGGTG 
4700
TTTGTGTCTT CTCTTATGAA CAGCTTCTCT CTCTCAAGAC AATGTCGAGA 
4750
AACCTCTGAa tccaacgacg tcgtttgaag aaacaccaaa agctctctgt 
4800
ttttgttttg tttaacgttt cttctacata gcgttttaat ggcgttttga 
4850
ttctcagttt caatgtacaa aagttttggt ttgattgatg atattctaaa 
4900
gaacgaacta tatgagaaac tttgcaattt tttcacatta aggtttcaat 
4950
acaaacataa acgatacata aagttctcaa agacaaaatc aaaacatgaa 
5000
aaattccTCA GGGTTTAGTG GTAGAAGAAG AAGCAAGAAG AAGCTCAAGC 
5050
ATCTGATTAC CCAAATCCTG TTCCTTAAGA CACAAAGCTT TCCATCCATC 
5100
ATTCAACTCT TTAGCTTTAT CATCACCAAT AAGCTTGACT CTCTCAAAAG 
5150
CAACTTCTTC AGAAATCAAA CCTTGAGCTA CAATAATCTC CACTAACTCC 
5200
TTCAAATACG GATACTTAAC CCAAAACCCT TCCACAGTTT ctgtaacaca 
5250
aaaatcagag atacgaatcg attacacaac aatctcgaca taacaagact 
5300
cgttcaagct tattcagagt agaaacagag gaaatggtga atatgaacCT 
5350
TCGTTTACGA GATTGGAGAG AGATCCTTCG TTTGTGTTTA CTAACTCGGA 
5400
CGATTCGTCT TCCATTGATT CGTCTTCAGA TGAATTAGAA ATTTCGGAAC 
5450
CGTTGTACTC TTCGTCGGAT GATTCAGGTG GAGAGTTGAT GAGGAAGTGA 
5500
ATCGGAACCG CCATtgtcgt tgggatttga gcttgaagaa acgaataaga 
5550
gtcgatttgt gcttgtgtgt atcaatttat tttacggagt acgaaattgt 
5600
ttgtaaattt gtttagctga cgtggattga accggttcta gaagaagatg 
5650
gaagcaagat caatataata aaccaaaaat aaactaaacc gaaaattgaa 
5700
aatgcgaaat atgaacaaga ttaaacgttg ccaatataat agtacacaag 
5750
cacaatttga tgagatagta aataaaagct attaaaaaac tctactgttc 
5800
gttcagatct ctcttttttt ataatcataa tttaaacatt ttaaactggt 
5850
ttttagatta tagattttta aaagctcaaa aaaacaaaac taagaccatg 
5900
aatggatgct aatttagatt cagtttttga gtttagattt tagtttatag 
5950
attttagatt ttagttttag atttttgtta ttatattttt gtttagaaaa 
6000
cccaaaaaat ttggttttta gtttttgaga aaaataatgt tgattgaata 
6050
aaaactagat tttctaaatt ttaggaaaac taaaaaacta aaatcatgaa 
6100
tggaaaacta cagtaacata gttttactaa attgtaggga aaccaaaatt 
6150
ttaaaatctt gattggtatg aaaataagtt tttaaaaaac aaaaaccaaa 
6200
aactcttaca aaatctacaa aacattcaag gcctttagat tacagatttt 
6250
ggattcta
6300