fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G25710 TMO5, BHLH32, bHLH032, ATAIG1 TARGET OF MONOPTEROS 5, basic helix-loop-helix 32 (.1)

>AT3G25710.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HpaI, KpnI, NdeI, NotI, PacI, PstI, PvuII, SacI, SmaI, XbaI, XhoI
Name Recognition sequence Cut positions
HindIII A|AGCTT 497
NcoI C|CATGG 251
NheI G|CTAGC 507
SalI G|TCGAC 105
SpeI A|CTAGT 1003
StyI C|C[AT][AT]GG 251


Click here to view TAIR data

>AT3G25710.1 length:1035
ATGTACGCAA TGAAAGAAGA AGACTGTCTT CAAACATTTC ACAACTTACA 
50
AGACTATCAA GACCAGTTTC ATCTTCATCA TCATCCACAA ATTCTCCCCT 
100
GGTCGTCGAC ATCTTTACCT TCTTTTGACC CACTCCATTT CCCATCTAAC 
150
CCGACCCGTT ATTCTGACCC GGTTCACTAC TTCAACAGAA GAGCTTCTTC 
200
TTCCTCTTCT TCTTTTGACT ATAACGACGG TTTTGTCTCT CCTCCTCCTT 
250
CCATGGATCA TCCTCAGAAC CATCTAAGGA TTTTATCCGA AGCTCTTGGA 
300
CCCATCATGC GTCGTGGCTC GTCCTTTGGG TTCGATGGTG AGATCATGGG 
350
AAAATTGAGT GCACAAGAAG TCATGGATGC TAAGGCTTTA GCTGCTTCAA 
400
AGAGTCATAG TGAAGCTGAG AGAAGAAGAC GAGAGAGAAT CAACACTCAT 
450
CTTGCTAAGC TGCGTAGTAT ATTACCAAAC ACAACCAAAA CGGACAAAGC 
500
TTCTTTGCTA GCGGAAGTGA TCCAACACAT GAAGGAGCTA AAACGACAAA 
550
CATCACAGAT CACCGACACG TATCAAGTCC CAACAGAGTG CGATGATCTG 
600
ACCGTAGATT CGTCTTACAA CGACGAGGAA GGAAACTTGG TGATAAGAGC 
650
ATCCTTTTGC TGCCAAGACA GGACTGACCT CATGCATGAC GTCATCAATG 
700
CCTTAAAGTC TCTTCGTCTT CGAACTCTCA AAGCTGAGAT CGCAACCGTA 
750
GGTGGTAGAG TCAAGAACAT CTTGTTCTTG AGCCGAGAAT ACGATGATGA 
800
AGAAGATCAT GATTCATATC GTAGAAACTT CGATGGTGAT GACGTGGAGG 
850
ATTATGATGA AGAGAGGATG ATGAATAATC GTGTGAGTTC GATAGAAGAA 
900
GCGTTAAAGG CGGTTATAGA GAAGTGTGTT CATAATAATG ATGAAAGTAA 
950
CGATAACAAT AACTTGGAGA AATCATCTTC AGGGGGTATT AAGAGGCAAA 
1000
GGACTAGTAA GATGGTGAAT CGATGTTATA ATTAG
1050

>AT3G25710.1 longest ORF length:344
MYAMKEEDCL QTFHNLQDYQ DQFHLHHHPQ ILPWSSTSLP SFDPLHFPSN 
50
PTRYSDPVHY FNRRASSSSS SFDYNDGFVS PPPSMDHPQN HLRILSEALG 
100
PIMRRGSSFG FDGEIMGKLS AQEVMDAKAL AASKSHSEAE RRRRERINTH 
150
LAKLRSILPN TTKTDKASLL AEVIQHMKEL KRQTSQITDT YQVPTECDDL 
200
TVDSSYNDEE GNLVIRASFC CQDRTDLMHD VINALKSLRL RTLKAEIATV 
250
GGRVKNILFL SREYDDEEDH DSYRRNFDGD DVEDYDEERM MNNRVSSIEE 
300
ALKAVIEKCV HNNDESNDNN NLEKSSSGGI KRQRTSKMVN RCYN
350