Locus |
Common name |
Short description |
AT3G28910 |
AtMYB30, MYB30 |
myb domain protein 30 (.1) |
>AT3G28910.1 CDS map
>>Show genomic map

Uncut enzymes: AatII, Acc65I, AccIII(BspMII), AclI, AfeI, AflII, AflIII, AgeI, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, ApoI, AscI, AseI, AvaI, AvrII, BaeI, BalI, BamHI, BanI, BanII, BbsI, BbvI, BcgI, BciVI, BglI, BglII, BlpI, BmrI, BpmI, BsaAI, BsaHI, BsaI, BsaWI, BsaXI, BseRI, BsgI, BsiEI, BsiHKAI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BsoBI, Bsp1286I, BspDI, BspEI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BsrFI, BsrGI, BssHII, BssSI, BstAPI, BstBI, BstEII, BstYI, BstZ17I, Bsu36I, BtrI, BtsI, Cfr10I, ClaI, DraI, DraIII, EaeI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRI, FauI, FokI, FseI, FspI, HaeII, HgaI, HhaI, HinP1I, HincII, HindIII, HpaI, HpaII, HphI, Hpy99I, I-CeuI, I-SceI, KasI, KpnI, MboII, MluI, MlyI, MnlI, MscI, MslI, MspI, N.BstNBI, NaeI, , NarI, NciI, NdeI, NgoMIV, NlaIV, NotI, NsiI, NspI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflFI, PflMI, PleI, PmeI, PmlI, PpuMI, PshAI, PsiI, PspOMI, PvuI, PvuII, RsaI, RsrII, SacI, SalI, SapI, SbfI, ScaI, SexAI, SfaNI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SpeI, SphI, SspI, SwaI, Taqƒ¿I, TliI, Tth111I, XbaI, XcmI, XhoI, XmaI, XmnI
Name |
Recognition sequence |
Cut positions |
AccI
| GT|[AC][TG]AC |
158 |
AccII(FnuDII)
| CG|CG |
655, 706 |
AciI
| C|CGC |
705 |
AluI
| AG|CT |
112, 592 |
AvaII
| G|G[AT]CC |
96 |
BbvCI
| CC|TCAGC |
591 |
BclI
| T|GATCA |
743, 801, 834 |
BfaI
| C|TAG |
594 |
BsaBI
| GATNN|NNATC |
368 |
BsaJI
| C|CNNGG |
46, 707 |
BslI
| CCNNNNN|NNGG |
130 |
BspHI
| T|CATGA |
837 |
BsrI
| ACTGGN| |
130, 859 |
BssKI
| |CCNGG |
99, 186 |
BstF5I
| GGATGNN| |
863, 949 |
BstNI
| CC|[AT]GG |
99, 186 |
BstUI
| CG|CG |
655, 706 |
BstXI
| CCANNNNN|NTGG |
93 |
BtgI
| C|CPuPyGG |
46, 707 |
Cac8I
| GCN|NGC |
595 |
DdeI
| C|TNAG |
138, 162, 251, 502, 590, 606, 793 |
DpnI
| GA-CH3|TC |
710, 742, 800, 833 |
DpnII
| |GATC |
710, 742, 800, 833 |
DrdI
| GACNNNN|NNGTC |
555 |
EcoRV
| GAT|ATC |
64, 475 |
Fnu4HI
| GC|NGC |
134, 145, 267, 865 |
HaeIII
| GG|CC |
6, 42, 183, 446 |
HinfI
| G|ANTC |
50, 190, 363, 570, 695, 915 |
Hpy188I
| TCN|GA |
501, 792, 967 |
HpyCH4III
| ACN|GT |
382, 543 |
HpyCH4IV
| A|CGT |
554 |
HpyCH4V
| TG|CA |
143, 268, 523, 769, 866 |
MboI
| |GATC |
710, 742, 800, 833 |
MfeI
| C|AATTG |
272 |
MseI
| T|TAA |
179, 309 |
MspA1I
| C[AC]G|C[GT]G |
707 |
MwoI
| GCNNNNN|NNGC |
273, 492 |
NcoI
| C|CATGG |
46 |
NheI
| G|CTAGC |
595 |
NlaIII
| CATG| |
45, 92, 215, 836 |
NruI
| TCG|CGA |
656 |
PspGI
| |CC[AT]GG |
99, 186 |
PstI
| CTGCA|G |
867 |
SacII
| CCGC|GG |
707 |
Sau3AI
| |GATC |
710, 742, 800, 833 |
Sau96I
| G|GNCC |
42, 96 |
ScrFI
| CC|NGG |
99, 186 |
SfcI
| C|TPuPyAG |
542, 725, 867 |
SmlI
| C|TPyPuAG |
441, 639 |
StuI
| AGG|CCT |
7 |
StyI
| C|C[AT][AT]GG |
46 |
TfiI
| G|A[AT]TC |
190, 363, 570, 915 |
TseI
| G|C[AT]GC |
134, 145, 267, 865 |
Tsp45I
| |GT[CG]AC |
19, 75, 546 |
Tsp509I
| |AATT |
104, 203, 271, 422, 660, 959 |
TspRI
| NNCA[CG]TGNN| |
546 |
Click here to view TAIR data
>AT3G28910.1 length:972
ATGGTGAGGC CTCCTTGTTG TGACAAAGGA GGAGTGAAGA AAGGGCCATG | 50 |
GACTCCTGAA GAAGATATCA TTTTAGTCAC TTACATCCAA GAACATGGTC | 100 |
CTGGTAATTG GAGAGCTGTT CCTACCAATA CTGGGCTGCT TAGATGCAGC | 150 |
AAGAGTTGTA GACTTAGATG GACAAACTAT TTAAGGCCAG GAATCAAAAG | 200 |
AGGCAATTTC ACAGAACATG AAGAAAAGAT GATTGTTCAT CTCCAAGCCC | 250 |
TCTTAGGAAA TAGATGGGCT GCAATTGCGT CATATCTTCC ACAAAGGACA | 300 |
GACAATGACA TTAAGAACTA TTGGAACACT CATTTGAAGA AGAAACTCAA | 350 |
CAAAGTCAAT CAAGATTCTC ATCAAGAACT TGACCGTTCC TCGCTCTCAT | 400 |
CTTCACCATC GTCTTCTTCT GCTAATTCCA ACTCAAACAT CTCAAGAGGC | 450 |
CAATGGGAAA GGCGACTTCA AACCGATATC CACTTGGCGA AAAAGGCTCT | 500 |
CTCTGAGGCT TTATCTCCTG CCGTTGCACC AATCATTACA TCTACAGTGA | 550 |
CAACAACGTC TTCCTCTGCT GAATCAAGAC GCTCTACTTC CTCAGCTAGC | 600 |
GGGTTTCTTA GGACGCAAGA AACATCTACA ACTTATGCCT CAAGCACCGA | 650 |
AAATATCGCG AAATTGCTCA AAGGGTGGGT GAAAAACTCG CCGAAGACTC | 700 |
AAAACTCCGC GGATCAAATC GCTTCTACAG AGGTAAAAGA AGTGATCAAG | 750 |
AGTGATGATG GGAAGGAGTG TGCAGGGGCA TTTCAGTCAT TTTCTGAGTT | 800 |
TGATCACTCA TATCAACAGG CTGGTGTTTC ACCTGATCAT GAGACCAAAC | 850 |
CAGACATAAC TGGATGCTGC AGTAACCAAA GTCAATGGTC TTTGTTTGAG | 900 |
AAGTGGTTGT TTGAGGATTC TGGTGGACAG ATTGGTGATA TTCTATTGGA | 950 |
TGAAAACACT AATTTCTTCT GA | 1000 |
>AT3G28910.1 longest ORF length:323
MVRPPCCDKG GVKKGPWTPE EDIILVTYIQ EHGPGNWRAV PTNTGLLRCS | 50 |
KSCRLRWTNY LRPGIKRGNF TEHEEKMIVH LQALLGNRWA AIASYLPQRT | 100 |
DNDIKNYWNT HLKKKLNKVN QDSHQELDRS SLSSSPSSSS ANSNSNISRG | 150 |
QWERRLQTDI HLAKKALSEA LSPAVAPIIT STVTTTSSSA ESRRSTSSAS | 200 |
GFLRTQETST TYASSTENIA KLLKGWVKNS PKTQNSADQI ASTEVKEVIK | 250 |
SDDGKECAGA FQSFSEFDHS YQQAGVSPDH ETKPDITGCC SNQSQWSLFE | 300 |
KWLFEDSGGQ IGDILLDENT NFF | 350 |
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