fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G28920 ATHB34, ZHD9 ZINC FINGER HOMEODOMAIN 9, homeobox protein 34 (.1)

>AT3G28920.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI
Name Recognition sequence Cut positions
BamHI G|GATCC 68
BglII A|GATCT 522
EcoRI G|AATTC 625
NheI G|CTAGC 414
XhoI C|TCGAG 570


Click here to view TAIR data

>AT3G28920.1 length:939
ATGCTTGAAG TTAGATCAAT GGATATGACT CCAAAATCAC CAGAACCCGA 
50
ATCCGAAACT CCGACCCGGA TCCAACCAGC TAAACCAATC TCTTTCAGTA 
100
ACGGAATCAT CAAACGCCAC CACCACCACC ACCACAACAA CAACAAAGTC 
150
ACTTACAAAG AATGTCTCAA GAACCACGCG GCGGCGATTG GTGGTCACGC 
200
GCTTGACGGT TGCGGCGAAT TTATGCCGTC TCCTTCGTCA ACACCTTCCG 
250
ATCCAACTTC TCTCAAGTGT GCAGCTTGTG GTTGTCACCG TAACTTCCAC 
300
CGCCGTGAAA CTGACGATTC CTCCGCCGTT CCACCACCGT CTCTTCTTCC 
350
ATCTTCAACA ACAACCGCCG CAATTGAGTA TCAGCCTCAT CACCGTCATC 
400
ATCCTCCTCC TCCGCTAGCT CCTCCGTTAC CACGTAGTCC TAATTCATCT 
450
TCTCCGCCGC CTATCTCTTC CTCCTACATG CTTTTAGCTC TCTCCGGTAA 
500
TAATAAAACC GCACCGTTCT CAGATCTAAA CTTCGCCGCC GCGGCTAACC 
550
ATCTCTCCGC CACGCCTGGC TCGAGGAAGC GATTCAGGAC GAAGTTTAGC 
600
TCAAATCAGA AAGAGAAGAT GCATGAATTC GCCGATCGAA TCGGTTGGAA 
650
GATTCAGAAA CGTGACGAAG ACGAAGTTCG TGATTTTTGC CGTGAGATCG 
700
GAGTTGATAA AGGTGTTCTC AAAGTTTGGA TGCATAATAA CAAAAACTCC 
750
TTCAAATTCT CCGGCGGAGG AGCAACCACC GTGCAGAGAA ACGATAACGG 
800
TATCGGCGGC GAGAACAGTA ACGATGATGG AGTTCGCGGT TTAGCTAACG 
850
ACGGTGACGG TGGTGGTGGG AGATTTGAGA GTGATAGTGG AGGAGCTGAT 
900
GGTGGCGGAA ACGTAAACGC CTCGTCGTCT TCGTCGTGA
950

>AT3G28920.1 longest ORF length:312
MLEVRSMDMT PKSPEPESET PTRIQPAKPI SFSNGIIKRH HHHHHNNNKV 
50
TYKECLKNHA AAIGGHALDG CGEFMPSPSS TPSDPTSLKC AACGCHRNFH 
100
RRETDDSSAV PPPSLLPSST TTAAIEYQPH HRHHPPPPLA PPLPRSPNSS 
150
SPPPISSSYM LLALSGNNKT APFSDLNFAA AANHLSATPG SRKRFRTKFS 
200
SNQKEKMHEF ADRIGWKIQK RDEDEVRDFC REIGVDKGVL KVWMHNNKNS 
250
FKFSGGGATT VQRNDNGIGG ENSNDDGVRG LANDGDGGGG RFESDSGGAD 
300
GGGNVNASSS SS
350