fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G49610 Domain of unknown function (DUF313) (.1)

>AT3G49610.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI
Name Recognition sequence Cut positions
StyI C|C[AT][AT]GG 307
XhoI C|TCGAG 728


Click here to view TAIR data

>AT3G49610.1 length:1005
ATGAATAGAA ATCATCATGA TCATCTCGAT GCTGCGGGGA AGGATATGTG 
50
GTCACGTTTA AGTGATTTGG CGGATAAAGC TGATATGCTA TATGAAAGAG 
100
AAGGAATATC CAAAGACCGC AAGAGTGTCT CAGAAGAAGA AGAAGAAAAG 
150
AAGACGAGAT TCAGTATTTT GGTGGATCTC GTGGGTAGGT TATGTGATCA 
200
AGAGGAACGT CGTACTCTTG GATCATCTCC TACAAAAACC AACACTCTTT 
250
TTGAGGGTAG TGAAAAGAGC CACTTGGATC ATCACTTGGA TCATCTCCCA 
300
CAAAAACCAA GGTCTTCCCT TGAGTGTTTT TTTACTAGAG TATACACGCG 
350
ACGAAACCAT AATAACGTTT CTACTTCTTC ATCGCTCTTC AACACGGATG 
400
AGTTTGAGAG GACGGAGACT AAAAGCCCTA CAATCCGTAA TTCCCAATCT 
450
TCACCGTCTT CGTGTCTAAT GGAGAACACA AAACGCAAGA GGTATCAAAG 
500
TAGTGGTAAA TCCAAGAAAC CAAAGTTTGA TCCTTTCTCA CTGACTGCGG 
550
CGAGAGAGAC GCCAGAGTGG CTTTTAGATG TGATGAGAAA GATGAAGGGA 
600
GCCGAAGGAC CGATCAAACT GATCTACGAG AAGACTTTGA CCGCAACTGA 
650
CGTCAAGCCA AGCGAGAGTC GTCTCTTAAT ACCTTTCAAT AAGTTACTCA 
700
GAAACGACTT CTTGACTCCT GAGGAGTCTC GAGCCATAGC CATAGATAAA 
750
GAAGAAGAAG AAGAAGACAC CAAGAAAATT GGTGTGAAAA CGATTATCGT 
800
GAATCAATTC TCTAAAGAAT GGAGTTTACG TTTTCTGATA TGGGTGATGA 
850
AGAAGAAAAA ATCTGGAAAT GGAACCTTGT ACTACACTTT GAATCGGGGG 
900
TGGAATGGTG TCGTCTCGGG TAACAAGCTC AAAGCCAACG ACAATATTAG 
950
TCTTTGGACT TTCAGGTGTG GTGGAGTCCT CTGTTTTGCC CTTGAGAAAG 
1000
AGTAG
1050

>AT3G49610.1 longest ORF length:334
MNRNHHDHLD AAGKDMWSRL SDLADKADML YEREGISKDR KSVSEEEEEK 
50
KTRFSILVDL VGRLCDQEER RTLGSSPTKT NTLFEGSEKS HLDHHLDHLP 
100
QKPRSSLECF FTRVYTRRNH NNVSTSSSLF NTDEFERTET KSPTIRNSQS 
150
SPSSCLMENT KRKRYQSSGK SKKPKFDPFS LTAARETPEW LLDVMRKMKG 
200
AEGPIKLIYE KTLTATDVKP SESRLLIPFN KLLRNDFLTP EESRAIAIDK 
250
EEEEEDTKKI GVKTIIVNQF SKEWSLRFLI WVMKKKKSGN GTLYYTLNRG 
300
WNGVVSGNKL KANDNISLWT FRCGGVLCFA LEKE
350