fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G49610 Domain of unknown function (DUF313) (.1)

>AT3G49610.1 genomic map

>>Show CDS map




Uncut enzymes: ApaI, AscI, EcoRV, KpnI, NcoI, NheI, NotI, PstI, PvuII, SalI, SmaI
Name Recognition sequence Cut positions
BamHI G|GATCC 2220
BglII A|GATCT 3653, 5989, 6062
EcoRI G|AATTC 5351
HindIII A|AGCTT 6346, 6367, 6409
HpaI GTT|AAC 2856, 5228, 5459
NdeI CA|TATG 3399, 5272
PacI TTAAT|TAA 927
SacI GAGCT|C 3924, 3944
SpeI A|CTAGT 1425
StyI C|C[AT][AT]GG 4307
XbaI T|CTAGA 5446
XhoI C|TCGAG 4728, 5629


Click here to view TAIR data

>AT3G49610 genomic sequence (4001-5005,) length:6504
Tctaaaagaa agaaagacaa tgaaatgaaa ttagaaactt ataaatttta 
50
ctgataaaca aaaaaggggt aaaaacacac CTGTGCACAG CTTAATATAC 
100
TTCTCCATTA AATCTTTGTA CTCTTGAGGA TTTCCTGGCc ttcaaaaaag 
150
aggtagcaaa aaatacacaa agagataaat agtcaaagag ataaatgatt 
200
tcgtcattta ttatgggtta ttcaaagata tatatatata tatatatata 
250
tatatatatt tacaaaaatt aaaacgtcat taatctatta aaattagttt 
300
taaatgtttt atgattactt tggttagcct ctattcagtt aatatatatc 
350
attctactat cgatcgtttc actattctta ttcatatatg tgcatctaca 
400
cactttattt atcttgtcgc cctttcgtta taatattttt ttaacacaaa 
450
cttagatgca aaagaaaaca atcaatcaaa ctcttacCAC TGGTTTGGCC 
500
CTTCCAAGAC CTTTCCGATG TCCCCATGTT TCCCTTGCTT GAACTCTCTG 
550
TAACActgta ttcgtcgcgg tccataagag agagattaca accatatcag 
600
ctagttagaa attagaatta ctacttcgat cgaatgcatg catcactcac 
650
accaatggct agttagacaa acttacATCA ATGGCTTCGT GCATATCTTG 
700
TTTCCCACTC GTAAAATTTA CTCCAATTCT TTGGTATCCT ctgtacatat 
750
atgtaacaca acgcccatga gtgattcgat tataagatat actttttgtt 
800
ttctaaggcg tgttcaattc gtatttattc ggtttgtgtt ctctggaaat 
850
tagaaattca ggaatgtaaa aactaatcaa caaatgtttg tttttcaaga 
900
tattttaaga taataaaaac cagtttaatt aacacatatt agtgttagaa 
950
gtctttttct ccgttcattt atccaaattg attattgtgt ttggaaaaag 
1000
gtggacattg aacaaaattg caacgatcgt tgatatagca ggttacccac 
1050
tttggttcat attttgatat atatggaaac aaacCTGTAT CCAGCAGTTG 
1100
GAGTAATCTT GATCTTAAGT TTCTCCTCGT AAGGAAGCTC GAAGAACTGA 
1150
TGCGTCATCT CTTTCACCTT ATTTATAAGA TCATCCGATA TTCCATGACC 
1200
AATctgatcc acactcacca accataatca gacatcttta ttataaaacc 
1250
cctaaaaaag aaactcaaat ttcgaaaatt tgttacCACG TAGAAGAATC 
1300
CGACGTCCCG ACATGCCCTG TCCAGTTTTC CGACTACTTC CACAACCCCC 
1350
GCATCCTCAG CCATGTCGAA ATCATCACAT TTGGCCAGTA AAGGACTGAT 
1400
GTctgcaaca acattatcac attaactagt ttagttagtg aagatttttg 
1450
ctgaaaataa tgaatatacg gtttcttacg tacCGATAAC TGGTAGTAGG 
1500
GATTTGAAGT CTGTCACCAT TTCAATATTA AGGAAATGAT AGAAACGCTT 
1550
TGCTCTTACG TACGTAAAGA CTACTTTGCG ATGATATATT ACCATaaatg 
1600
gttatctcat ttgtataaat acacattaaa aattgtccct taggatttct 
1650
aaaggccaaa cggagcagcc cacgtgggaa atcatagagt gatctgttat 
1700
cagacatata tttttgtcac tcaaataaac tgtagtgatc gttattattc 
1750
ggttttataa ctttttaaaa taaaattagt aatttcttag tagctttaat 
1800
gctttgtgat tggtttgttg aatacatttt taaaagttta ttcgcatttt 
1850
agataaaaag taattaccaa agattataca aatgtttatc atcacgtgta 
1900
agttagtttg gaggataatg ataaataaat taaaaagtga gtgatccaaa 
1950
tcccttgata agagtttgag cattatctag ttatgtttgt ggcattgttt 
2000
attcttatca gatcattgcg gaaaaaagaa aacgcataaa ctcaattcac 
2050
taaataagtt cgttagttaa ttagtcaaca aacatcaaaa gcaacaaaag 
2100
tagacggcac ctagctccaa caacagtaag aatgacacgc tggtagctaa 
2150
gacaaattcc aacaagacgg ccgccggcgt tagtttgcca ctacatagcc 
2200
cggcccaccc taaggtctcg gatccaattc acttgtcagc agggccggct 
2250
caatgatatt tgagtcttgt actaaaatat ttttttgacc cacaaattaa 
2300
tcaaaattat tttttggccc tctaatttaa tcaaatttat ttgttaggcc 
2350
ttaaatctaa taactttttc attttagccc ttaatttcag ttaaaaaaaa 
2400
attggaccct gagcaaatgc tccacttgca caccccatca gccggccctg 
2450
atcttgatat ttgagtccac gtactaaaat atttttttgg cccacaaatt 
2500
aagcaaaatt ttttttggcc ctctaattta atcaaattta ttttttggga 
2550
ccttaaatct aatcaatttt ttcaaattgg cccttaattt cagtctaaaa 
2600
aattttggac cctgagcaaa tactccactt acacacccct tgagccggcc 
2650
ctgcttgtca gatatatatc agattttttt ttagtaaata ataaatcgtc 
2700
ttgctaagga aattctaatt gtaattcacg gggaagttaa ggactatata 
2750
gtgcatgctc gcgaatcata ccagtttgat tttgtttcaa gtttgatgtt 
2800
gttgtggatg catgtttgag ggctttacgg gtttaaaaag aatagttttt 
2850
gtcacgttaa caaaaaaaaa gtttttgtta aaattggata aaaataaaga 
2900
tgatttgtct cattaagttt gatttgcatt acctttttga tacttaaaaa 
2950
atcaattaaa aggctaaaag caattgaaga tagaataagg aaaattcttc 
3000
ttgattcgag ttcaggctaa ttagttagca gagttccact tgaatttttc 
3050
aatggcttca aaataagaag atattttgat tgaagtagtc aaagtaaaac 
3100
aacatgagag aattttcttg tatacacttg gaaaagggtc aaagttcatc 
3150
tcttattttt attaatatat actgattatt atttgattga actaaattca 
3200
atattcaagt ttcttctcca tatatatttt ggcaaccagt atacattatt 
3250
tcagtagatg aaagtcaaca ttggtgcttg ttgttgcatc ttgcaagtat 
3300
ggtattggta tggtccagtg cttgttctac gaggtcgagt gatccaacac 
3350
acttaacaca aagaaaaaga aaaagagagt aaagtcaata ctgaaaccca 
3400
tatggcccaa aatttgttcg aagcccaata cataatttgg aacctaattt 
3450
gagaagtcca ttacagaaca tttagtggat aaaattaccc aactattaat 
3500
ccaccattca taattgtctc gtgcgtttat cagaaccaca attgttactt 
3550
gttagcttgg atataattga ctttgttctt ctgatattaa ctcgatactg 
3600
gtcgtactgt ctaaggttaa aatcaaattt gatggccctg aaataattta 
3650
aaagatcttt aactgtattg ggcctaagct cattgacgat tctcacactt 
3700
ggttttaaat ctgagatatg ttcttgtttc gttttttttt gtttggtttt 
3750
atcatttatg ttgggatcag tttcgtttag ggtttctgtt gaagtaacgg 
3800
tgtataaata agtttatttg gatagatatt atgagattat atatctatga 
3850
ttatcttcaa aagttattaa ctttacacaa attaagttag ttataagaaa 
3900
aacaaaaaac cataatgtaa atggagctcc taactacatt tatgagctct 
3950
ttcgtttaat tactttttcc tctccctctt gagttttctg ttcgatcaca 
4000
ATGAATAGAA ATCATCATGA TCATCTCGAT GCTGCGGGGA AGGATATGTG 
4050
GTCACGTTTA AGTGATTTGG CGGATAAAGC TGATATGCTA TATGAAAGAG 
4100
AAGGAATATC CAAAGACCGC AAGAGTGTCT CAGAAGAAGA AGAAGAAAAG 
4150
AAGACGAGAT TCAGTATTTT GGTGGATCTC GTGGGTAGGT TATGTGATCA 
4200
AGAGGAACGT CGTACTCTTG GATCATCTCC TACAAAAACC AACACTCTTT 
4250
TTGAGGGTAG TGAAAAGAGC CACTTGGATC ATCACTTGGA TCATCTCCCA 
4300
CAAAAACCAA GGTCTTCCCT TGAGTGTTTT TTTACTAGAG TATACACGCG 
4350
ACGAAACCAT AATAACGTTT CTACTTCTTC ATCGCTCTTC AACACGGATG 
4400
AGTTTGAGAG GACGGAGACT AAAAGCCCTA CAATCCGTAA TTCCCAATCT 
4450
TCACCGTCTT CGTGTCTAAT GGAGAACACA AAACGCAAGA GGTATCAAAG 
4500
TAGTGGTAAA TCCAAGAAAC CAAAGTTTGA TCCTTTCTCA CTGACTGCGG 
4550
CGAGAGAGAC GCCAGAGTGG CTTTTAGATG TGATGAGAAA GATGAAGGGA 
4600
GCCGAAGGAC CGATCAAACT GATCTACGAG AAGACTTTGA CCGCAACTGA 
4650
CGTCAAGCCA AGCGAGAGTC GTCTCTTAAT ACCTTTCAAT AAGTTACTCA 
4700
GAAACGACTT CTTGACTCCT GAGGAGTCTC GAGCCATAGC CATAGATAAA 
4750
GAAGAAGAAG AAGAAGACAC CAAGAAAATT GGTGTGAAAA CGATTATCGT 
4800
GAATCAATTC TCTAAAGAAT GGAGTTTACG TTTTCTGATA TGGGTGATGA 
4850
AGAAGAAAAA ATCTGGAAAT GGAACCTTGT ACTACACTTT GAATCGGGGG 
4900
TGGAATGGTG TCGTCTCGGG TAACAAGCTC AAAGCCAACG ACAATATTAG 
4950
TCTTTGGACT TTCAGGTGTG GTGGAGTCCT CTGTTTTGCC CTTGAGAAAG 
5000
AGTAGctctt tccttttaac tctgaatctg atatgtttca tttctacttg 
5050
gaacatttaa acttgatttt atcaagtttt ccattggcag agtagaggtt 
5100
tttggtctat agactatagt agtatagtaa cttcttcttt tcttttggtt 
5150
ttagtagtag taatttcttg caagtaaact taaggttttc ctacgattgc 
5200
atgtgatctt acactttatt attggtagtt aacttgctct ttctctcttg 
5250
tttactctac tttagttact acatatgatt tcttctttaa tctagtacaa 
5300
agtttaatct ggtgtgatgg aattgatcca attgtgcaag tgtttttggt 
5350
gaattcctca aaatgtgctt ataaaatcaa aatcaggaca aaatttgttg 
5400
ccaagacatg tttttgtttg tttggcatgt aatataatct ttagttctag 
5450
actttgatgt taacacgtgt ttagattcag tatgggactt gaaacatttt 
5500
catttgttac acacaccact gtgatgaaac agatatggag ataactatca 
5550
agtgctgcaa aatttactga gattccctac ttcacctaat ttgcctcagt 
5600
atagaacatc ttgatgagat aactaacact cgagattgtt ctttgtgcag 
5650
agaagaagaa cattgttctg ttcaaaaacc aagagaacat cagagtttta 
5700
atagtaccaa accctttttg ttgccaacaa gttctcaaga ataaaattaa 
5750
atagccgctt aaccatattg ggcctttgac caacataaaa ccatattggg 
5800
cctaagccca tataatactt atagacagac attgttgtgg ggaaaaaatt 
5850
gttactcctc ttccgttggt tctatcttcc gcatcgtcgt ctcctctgag 
5900
agtccgtacg catcgacgat tctctcatct tctctcaaac acgacgacac 
5950
tggtaatttt ggttttcctt gttttccact tcaatctaag atctgttgct 
6000
tttagtttct gtttggtttc atactgtgat ttggtttcgt ttagggtttc 
6050
tttgtatcga cagatctttc gatttgaatc tgaaacccaa tctcttcgct 
6100
tttttttcga ttcagggttg gtaaattaga gttgaaagAT GTACAACGGA 
6150
ATAGGGTTAC AGACAGCAAG AGGATCAGGA ACTAATGGTT ATGTTCAGAC 
6200
GAATAAGTTT TTTGTGAGAC CTAGAAATGG TGGTAAGCCT GTTAAAGGTG 
6250
GGAAAGGTTT TGAGGATGAT GAAGGTACTG CTGGTTTATC TAAGAAACCC 
6300
AATAAAGCTA TCCTTGAGCA TGACCGTAAA CGTCAGATTC ATCTTAAGCT 
6350
TGCTATTCTT GAGGATAAGC TTGCTGATCA GGGTTATTCT GATATTGAGA 
6400
TTGCTCAGAA GCTTGAGGAA GCTAGAGTGA GTCTTGAAGC TGCTGCTGCT 
6450
GCTAATGAAG AAGAGAGTGA TTCGAAGGTT TCTAATACTC AGACTCATCA 
6500
GGTT
6550