Locus |
Common name |
Short description |
AT3G50890 |
ATHB28, ZHD7 |
ZINC FINGER HOMEODOMAIN 7, homeobox protein 28 (.1) |
>AT3G50890.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, SacI, SmaI, SpeI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
BamHI
| G|GATCC |
72 |
NcoI
| C|CATGG |
110 |
PvuII
| CAG|CTG |
361 |
SalI
| G|TCGAC |
160 |
StyI
| C|C[AT][AT]GG |
110, 165 |
Click here to view TAIR data
>AT3G50890.1 length:750
ATGGAGCTTG GAGGAAAATG CAATGCAATT ACAACCACAA CAATGATCTC | 50 |
AACAGAAGTA AAGCCACATA CGGATCCGGA ACCAGAAGCC AAACCCGAAT | 100 |
CAGATCCATC CATGGCTTTA TTCCCGATCA AGAAAGAAAA CCAAAAACCA | 150 |
AAGACACGTG TCGACCAAGG AGCTAAGTAC CGGGAATGTC AGAAGAACCA | 200 |
CGCGGCCTCA ACCGGAGGAC ACGTGGTGGA CGGATGCTGC GAGTTCATGG | 250 |
CCGGCGGAGA AGAAGGTACA CTCGGTGCTT TAAAATGCGC CGCCTGTAAC | 300 |
TGTCACCGGA GCTTCCACCG GAAAGAAGTG TACGGACACA GGAACAGTAA | 350 |
ACAAGATCAT CAGCTGATGA TAACTCCGGC GTTTTACAGC AGTAACAGCT | 400 |
CGTACAAGCC ACGTGTAATG CATCCAACGG GTGAGATTGG ACGGAGGACT | 450 |
TCATCTTCAA GCGAGGATAT GAAGAAGATT CTGAGTCATC GTAACCAAAA | 500 |
CGTTGATGGG AAAAGTTTGA TGATGATGAT GATGAGGAAG AAGAAGAGAG | 550 |
TGAGGACAAA GATCAATGAA GAACAAAAGG AGAAGATGAA GGAATTTGCA | 600 |
GAGAGATTAG GGTGGAGGAT GCAGAAGAAA GATGAAGAAG AGATTGATAA | 650 |
GTTTTGTAGG ATGGTGAATC TGAGGAGACA AGTTTTTAAG GTTTGGATGC | 700 |
ATAATAACAA GCAAGCAATG AAGAGAAACA ATAGTAACAT TAGTGAATAG | 750 |
>AT3G50890.1 longest ORF length:249
MELGGKCNAI TTTTMISTEV KPHTDPEPEA KPESDPSMAL FPIKKENQKP | 50 |
KTRVDQGAKY RECQKNHAAS TGGHVVDGCC EFMAGGEEGT LGALKCAACN | 100 |
CHRSFHRKEV YGHRNSKQDH QLMITPAFYS SNSSYKPRVM HPTGEIGRRT | 150 |
SSSSEDMKKI LSHRNQNVDG KSLMMMMMRK KKRVRTKINE EQKEKMKEFA | 200 |
ERLGWRMQKK DEEEIDKFCR MVNLRRQVFK VWMHNNKQAM KRNNSNISE | 250 |
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