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| Locus | Common name | Short description |
| AT3G54340 | AP3, ATAP3 | APETALA 3, K-box region and MADS-box transcription factor family protein (.1) |
>AT3G54340.1 CDS map
>>Show genomic map
Uncut enzymes: AatII, Acc65I, AciI, AclI, AfeI, AflII, AflIII, AgeI, AhdI, AlwI, Aor51HI(Eco47III), ApaI, ApaLI, ApoI, AscI, AseI, AvaI, AvaII, AvrII, BaeI, BalI, BamHI, BanI, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BglI, BlpI, BmrI, BpmI, BsaHI, BsaI, BsaXI, BseRI, BsgI, BsiEI, BsiWI, BsmAI, BsmBI, BsmFI, BsoBI, BspDI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BsrFI, BsrGI, BsrI, BssHII, BssKI, BssSI, BstBI, BstEII, BstNI, BstXI, BstZ17I, Bsu36I, BtrI, BtsI, Cfr10I, ClaI, DraI, DraIII, DrdI, EaeI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HaeII, HgaI, HpaI, HphI, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MscI, MseI, MslI, MspA1I, N.BstNBI, NaeI, , NarI, NciI, NdeI, NgoMIV, NheI, NlaIV, NotI, NsiI, NspI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflFI, PflMI, PleI, PmeI, PpuMI, PshAI, PsiI, PspGI, PspOMI, PstI, PvuI, PvuII, RsrII, SacII, SalI, SapI, SbfI, ScaI, ScrFI, SexAI, SfaNI, SfcI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SphI, SspI, StuI, SwaI, TliI, Tsp509I, TspRI, Tth111I, XbaI, XcmI, XhoI, XmaI, XmnI
| Name | Recognition sequence | Cut positions |
| AccI | GT|[AC][TG]AC | 538 |
| AccII(FnuDII) | CG|CG | 404 |
| AccIII(BspMII) | T|CCGGA | 302 |
| AluI | AG|CT | 99, 146, 156, 342, 357, 498, 511 |
| AlwNI | CAGNNN|CTG | 358 |
| BanII | GPuGCPy|C | 100 |
| BfaI | C|TAG | 120, 144, 323, 533 |
| BglII | A|GATCT | 204 |
| BsaAI | PyAC|GTPu | 590 |
| BsaBI | GATNN|NNATC | 19 |
| BsaJI | C|CNNGG | 642 |
| BsaWI | [AT]|CCGG[AT] | 302 |
| BsiHKAI | G[AT]GC[AT]|C | 100 |
| BslI | CCNNNNN|NNGG | 528, 642 |
| BsmI | GAATGCN| | 258 |
| Bsp1286I | G[GAT]GC[CAT]|C | 100 |
| BspEI | T|CCGGA | 302 |
| BspHI | T|CATGA | 162 |
| BstAPI | GCANNNN|NTGC | 660 |
| BstF5I | GGATGNN| | 376 |
| BstUI | CG|CG | 404 |
| BstYI | Pu|GATCPy | 14, 204, 519 |
| BtgI | C|CPuPyGG | 642 |
| Cac8I | GCN|NGC | 407 |
| DdeI | C|TNAG | 307, 507, 560 |
| DpnI | GA-CH3|TC | 13, 19, 196, 203, 310, 436, 518 |
| DpnII | |GATC | 13, 19, 196, 203, 310, 436, 518 |
| Fnu4HI | GC|NGC | 359 |
| HaeIII | GG|CC | 238, 644 |
| HhaI | GCG|C | 409 |
| HinP1I | G|CGC | 409 |
| HincII | GTPy|PuAC | 467 |
| HindIII | A|AGCTT | 157 |
| HinfI | G|ANTC | 305, 431, 485, 558 |
| HpaII | C|CGG | 301 |
| Hpy188I | TCN|GA | 222, 308, 434, 666 |
| Hpy99I | CG[AT]CG| | 363 |
| HpyCH4III | ACN|GT | 105, 278 |
| HpyCH4IV | A|CGT | 56, 589 |
| HpyCH4V | TG|CA | 258, 652 |
| MboI | |GATC | 13, 19, 196, 203, 310, 436, 518 |
| MspI | C|CGG | 301 |
| MwoI | GCNNNNN|NNGC | 660 |
| NcoI | C|CATGG | 642 |
| NlaIII | CATG| | 95, 136, 161, 494, 641, 650 |
| NruI | TCG|CGA | 405 |
| PmlI | CAC|GTG | 590 |
| RsaI | GT|AC | 208 |
| SacI | GAGCT|C | 100 |
| Sau3AI | |GATC | 13, 19, 196, 203, 310, 436, 518 |
| Sau96I | G|GNCC | 238 |
| SmlI | C|TPyPuAG | 370 |
| SpeI | A|CTAGT | 534 |
| StyI | C|C[AT][AT]GG | 642 |
| Taqƒ¿I | T|CGA | 128, 228, 438, 579 |
| TfiI | G|A[AT]TC | 431, 485 |
| TseI | G|C[AT]GC | 359 |
| Tsp45I | |GT[CG]AC | 54, 587 |
Click here to view TAIR data
>AT3G54340.1 length:699
ATGGCGAGAG GGAAGATCCA GATCAAGAGG ATAGAGAACC AGACAAACAG | 50 |
ACAAGTGACG TATTCAAAGA GAAGAAATGG TTTATTCAAG AAAGCACATG | 100 |
AGCTCACGGT TTTGTGTGAT GCTAGGGTTT CGATTATCAT GTTCTCTAGC | 150 |
TCCAACAAGC TTCATGAGTA TATCAGCCCT AACACCACAA CGAAGGAGAT | 200 |
CGTAGATCTG TACCAAACTA TTTCTGATGT CGATGTTTGG GCCACTCAAT | 250 |
ATGAGCGAAT GCAAGAAACC AAGAGGAAAC TGTTGGAGAC AAATAGAAAT | 300 |
CTCCGGACTC AGATCAAGCA GAGGCTAGGT GAGTGTTTGG ACGAGCTTGA | 350 |
CATTCAGGAG CTGCGTCGTC TTGAGGATGA AATGGAAAAC ACTTTCAAAC | 400 |
TCGTTCGCGA GCGCAAGTTC AAATCTCTTG GGAATCAGAT CGAGACCACC | 450 |
AAGAAAAAGA ACAAAAGTCA ACAAGACATA CAAAAGAATC TCATACATGA | 500 |
GCTGGAACTA AGAGCTGAAG ATCCTCACTA TGGACTAGTA GACAATGGAG | 550 |
GAGATTACGA CTCAGTTCTT GGATACCAAA TCGAAGGGTC ACGTGCTTAC | 600 |
GCTCTTCGTT TCCACCAGAA CCATCACCAC TATTACCCCA ACCATGGCCT | 650 |
TCATGCACCC TCTGCCTCTG ACATCATTAC CTTCCATCTT CTTGAATAA | 700 |
>AT3G54340.1 longest ORF length:232
MARGKIQIKR IENQTNRQVT YSKRRNGLFK KAHELTVLCD ARVSIIMFSS | 50 |
SNKLHEYISP NTTTKEIVDL YQTISDVDVW ATQYERMQET KRKLLETNRN | 100 |
LRTQIKQRLG ECLDELDIQE LRRLEDEMEN TFKLVRERKF KSLGNQIETT | 150 |
KKKNKSQQDI QKNLIHELEL RAEDPHYGLV DNGGDYDSVL GYQIEGSRAY | 200 |
ALRFHQNHHH YYPNHGLHAP SASDIITFHL LE | 250 |