fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

>>AT3G54340 (AP3, ATAP3)

Alias AP3, ATAP3
TF Classification
FioreDBMADS (Click to show phylogenetic tree)
RARTFMADS / APETALA3
AtTFDBMADS / TypeII
PlnTFDBMADS (v3.0), MADS (v1.0)
DATFMADS
TAIR short description APETALA 3, K-box region and MADS-box transcription factor family protein (.1)
TAIR annotation Floral homeotic gene encoding a MADS domain protein homologous to SRF transcription factors. Specifies petal and stamen identities. Associates with PISTILLATA. (.1)
Gene model
Gene model cDNA support
AT3G54340.1 72
Entry clone (w/o stop) RE_03H10_x
External link
General info TAIR DATA
Genomic seq TAIR seq viewer
SNP SALK SNP Viewer
T-DNA tag line T-DNA Express
miRNA Search ASRP
Phylogeny SALAD database
Promoter ppdb
Microarray data
FioreDB
ATTED-II ATTED-II data
NCBI GEO NCBI GEO profile
NASC NASCarray_SpotHistory NASCarray_DigitalNorthern
Genevestigator Genevestigator
eFP Browser Developmental Map Abiotic Stress
AtGenExpress Development Hormone Abiotic Stress Light Pathogen
Gene Ontology (GO)
(P) 10093: developmental processes ->specification of floral organ identity
(P) 30154: other cellular processes ->cell differentiation
(F) 3677: DNA or RNA binding ->DNA binding
(F) 3700: transcription factor activity ->transcription factor activity, sequence-specific DNA binding
(P) 45944: other cellular processes ->positive regulation of transcription from RNA polymerase II promoter
(F) 46983: protein binding ->protein dimerization activity
(P) 48441: developmental processes ->petal development
(P) 48443: developmental processes ->stamen development
(C) 5634: nucleus ->nucleus
(P) 6351: transcription,DNA-dependent ->transcription, DNA-templated
(F) 977: nucleic acid binding ->RNA polymerase II regulatory region sequence-specific DNA binding
miRNA/tasiRNA
Orthologs
Type
Ia Ib II III Total
poplar 1 1 2
soybean 1 5 6
rice 1 1
sorghum 1 1
physcomitrella
Total 4 6 10
Repression motif
Repression motif
in putative orthologs
        
Status
Plasmid construction -> done
Plasmid construction -> done
Transformed -> done
T1 seed harvested -> done
T2 seed harvested -> done
CRES-T phenotype from individual project
View all photo
loss of stamen and petal, ap3-like
abnormal flower (direct input), abnormal stamen (direct input), abnormal petal (direct input)
CRES-T phenotype from publication abnormal petal, abnormal stamen, abnormal flower (PMID17147638)
CRES-T phenotype from bulk project
Phenotype in ornamental plants

ID Species Construct Date Comment Phenotype Photo
ID10 Pharbitis 35S:AtCDS-SRDX 2005-07-28   No phenotype   
ID12 Gentiana AtACT2pro:AtCDS-SRDX 2005-06-20 No phenotype  no phenotype   
ID13 Eustoma 35S:AtCDS-SRDX 2005-06-30   no phenotype   
ID60 Chrysanthemum 35S:AtCDS-SRDX 2005-10-24   no phenotype   
ID11 Cyclamen 35S:AtCDS-SRDX 2005-06-20   no phenotype   
ID50144 Torenia fournieri 35S:TfOrtholog-SRDX 2011-06-09    
[Publication link]
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