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| Locus | Common name | Short description |
| AT3G58780 | AGL1, SHP1 | SHATTERPROOF 1, AGAMOUS-like 1, K-box region and MADS-box transcription factor family protein (.1.2.3) |
>AT3G58780.1 CDS map
>>Show genomic map
Uncut enzymes: Acc65I, AccI, AccII(FnuDII), AclI, AfeI, AflII, AgeI, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AseI, AvaI, AvrII, BaeI, BalI, BamHI, BanII, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BglI, BglII, BlpI, BmrI, BpmI, BsaAI, BsaBI, BsaI, BsaJI, BsaXI, BseRI, BsgI, BsiEI, BsiHKAI, BsiWI, BslI, BsmAI, BsmBI, BsmFI, BsmI, BsoBI, Bsp1286I, BspDI, BspMI, BsrBI, BsrFI, BsrGI, BsrI, BssHII, BssKI, BstAPI, BstBI, BstEII, BstF5I, BstNI, BstUI, BstXI, BstYI, BstZ17I, Bsu36I, BtgI, BtrI, BtsI, Cfr10I, ClaI, DpnI, DpnII, DraI, DraIII, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRV, FauI, FokI, FseI, FspI, HgaI, HpaI, HphI, I-CeuI, I-SceI, KpnI, MboI, MboII, MluI, MlyI, MnlI, MscI, MseI, MslI, MspA1I, N.BstNBI, NaeI, , NciI, NcoI, NdeI, NgoMIV, NheI, NotI, NruI, NsiI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PflFI, PflMI, PleI, PmeI, PmlI, PpuMI, PshAI, PspGI, PspOMI, PstI, PvuI, PvuII, RsrII, SacI, SacII, SalI, SapI, Sau3AI, SbfI, ScrFI, SexAI, SfaNI, SfcI, SfiI, SgrAI, SmaI, SnaBI, SpeI, SphI, SspI, StuI, StyI, SwaI, TliI, Tth111I, XbaI, XcmI, XhoI, XmaI, XmnI
| Name | Recognition sequence | Cut positions |
| AatII | GACGT|C | 431 |
| AccIII(BspMII) | T|CCGGA | 579 |
| AciI | C|CGC | 457 |
| AflIII | A|CPuPyGT | 536 |
| AluI | AG|CT | 136, 256, 295, 330, 474 |
| ApoI | Pu|AATTPy | 360 |
| AvaII | G|G[AT]CC | 581 |
| BanI | G|GPyPuCC | 565 |
| BfaI | C|TAG | 44, 422 |
| BsaHI | GPu|CGPyC | 431, 565 |
| BsaWI | [AT]|CCGG[AT] | 579, 628, 678 |
| BspEI | T|CCGGA | 579 |
| BspHI | T|CATGA | 642 |
| BspT107I(HgiCI) | G|G[TC][AG]CC | 565 |
| BsrDI | GCAATGNN| | 121 |
| BssSI | C|TCGTG | 194 |
| Cac8I | GCN|NGC | 546 |
| DdeI | C|TNAG | 304, 328 |
| DrdI | GACNNNN|NNGTC | 122 |
| EaeI | Py|GGCCPu | 198, 714 |
| EcoRI | G|AATTC | 360 |
| Fnu4HI | GC|NGC | 653 |
| HaeII | PuGCGC|Py | 565 |
| HaeIII | GG|CC | 197, 713 |
| HhaI | GCG|C | 564 |
| HinP1I | G|CGC | 564 |
| HincII | GTPy|PuAC | 274 |
| HindIII | A|AGCTT | 137, 257, 331 |
| HinfI | G|ANTC | 344, 384, 445, 575, 591, 624, 698 |
| HpaII | C|CGG | 578, 627, 677, 711 |
| Hpy188I | TCN|GA | 264, 335, 356, 665 |
| Hpy99I | CG[AT]CG| | 23, 114 |
| HpyCH4III | ACN|GT | 223, 615 |
| HpyCH4IV | A|CGT | 430 |
| HpyCH4V | TG|CA | 107, 501, 522 |
| KasI | G|GCGCC | 565 |
| MfeI | C|AATTG | 239 |
| MspI | C|CGG | 578, 627, 677, 711 |
| MwoI | GCNNNNN|NNGC | 115, 171, 338, 457, 555 |
| NarI | GG|CGCC | 565 |
| NlaIII | CATG| | 535, 641 |
| NlaIV | GGN|NCC | 394, 565 |
| NspI | PuCATG|Py | 536 |
| PciI | A|CATGT | 536 |
| PsiI | TTA|TAA | 660 |
| RsaI | GT|AC | 211, 234, 247, 307, 538 |
| Sau96I | G|GNCC | 581 |
| ScaI | AGT|ACT | 308 |
| SfoI | GGC|GCC | 565 |
| SmlI | C|TPyPuAG | 130 |
| Taqƒ¿I | T|CGA | 346, 593 |
| TfiI | G|A[AT]TC | 344, 384, 445, 575, 591, 624, 698 |
| TseI | G|C[AT]GC | 653 |
| Tsp45I | |GT[CG]AC | 19, 288 |
| Tsp509I | |AATT | 238, 359, 705 |
| TspRI | NNCA[CG]TGNN| | 226 |
Click here to view TAIR data
>AT3G58780.1 length:747
ATGGAGGAAG GTGGGAGTAG TCACGACGCA GAGAGTAGCA AGAAACTAGG | 50 |
GAGAGGGAAA ATAGAGATAA AGAGGATAGA GAACACAACA AATCGTCAAG | 100 |
TTACTTTCTG CAAACGACGC AATGGTCTTC TCAAGAAAGC TTATGAACTC | 150 |
TCTGTCTTGT GTGATGCCGA AGTTGCCCTC GTCATCTTCT CCACTCGTGG | 200 |
CCGTCTCTAT GAGTACGCCA ACAACAGTGT GAGGGGTACA ATTGAAAGGT | 250 |
ACAAGAAAGC TTGTTCCGAT GCCGTCAACC CTCCTTCCGT CACCGAAGCT | 300 |
AATACTCAGT ACTATCAGCA AGAAGCCTCT AAGCTTCGGA GGCAGATTCG | 350 |
AGATATTCAG AATTCAAATA GGCATATTGT TGGGGAATCA CTTGGTTCCT | 400 |
TGAACTTCAA GGAACTCAAA AACCTAGAAG GACGTCTTGA AAAAGGAATC | 450 |
AGCCGTGTCC GCTCCAAAAA GAATGAGCTG TTAGTGGCAG AGATAGAGTA | 500 |
TATGCAGAAG AGGGAAATGG AGTTGCAACA CAATAACATG TACCTGCGAG | 550 |
CAAAGATAGC CGAAGGCGCC AGATTGAATC CGGACCAGCA GGAATCGAGT | 600 |
GTGATACAAG GGACGACAGT TTACGAATCC GGTGTATCTT CTCATGACCA | 650 |
GTCGCAGCAT TATAATCGGA ACTATATTCC GGTGAACCTT CTTGAACCGA | 700 |
ATCAGCAATT CTCCGGCCAA GACCAACCTC CTCTTCAACT TGTGTAA | 750 |
>AT3G58780.1 longest ORF length:248
MEEGGSSHDA ESSKKLGRGK IEIKRIENTT NRQVTFCKRR NGLLKKAYEL | 50 |
SVLCDAEVAL VIFSTRGRLY EYANNSVRGT IERYKKACSD AVNPPSVTEA | 100 |
NTQYYQQEAS KLRRQIRDIQ NSNRHIVGES LGSLNFKELK NLEGRLEKGI | 150 |
SRVRSKKNEL LVAEIEYMQK REMELQHNNM YLRAKIAEGA RLNPDQQESS | 200 |
VIQGTTVYES GVSSHDQSQH YNRNYIPVNL LEPNQQFSGQ DQPPLQLV | 250 |