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| Locus | Common name | Short description |
| AT3G58780 | AGL1, SHP1 | SHATTERPROOF 1, AGAMOUS-like 1, K-box region and MADS-box transcription factor family protein (.1.2.3) |
>AT3G58780.2 CDS map
>>Show genomic map
Uncut enzymes: Acc65I, AccI, AccII(FnuDII), AclI, AfeI, AflII, AgeI, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AseI, AvaI, AvrII, BaeI, BalI, BamHI, BanII, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BglI, BglII, BlpI, BmrI, BpmI, BsaAI, BsaBI, BsaI, BsaJI, BsaXI, BseRI, BsgI, BsiEI, BsiHKAI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BsoBI, Bsp1286I, BspDI, BspMI, BsrBI, BsrFI, BsrGI, BsrI, BssHII, BssKI, BstAPI, BstBI, BstEII, BstF5I, BstNI, BstUI, BstXI, BstYI, BstZ17I, Bsu36I, BtgI, BtrI, BtsI, Cfr10I, ClaI, DpnI, DpnII, DraI, DraIII, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRV, FauI, FokI, FseI, FspI, HgaI, HpaI, HphI, I-CeuI, I-SceI, KpnI, MboI, MboII, MfeI, MluI, MlyI, MnlI, MscI, MseI, MslI, MspA1I, N.BstNBI, NaeI, , NciI, NcoI, NdeI, NgoMIV, NheI, NotI, NruI, NsiI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PflFI, PflMI, PleI, PmeI, PmlI, PpuMI, PshAI, PspGI, PspOMI, PstI, PvuI, PvuII, RsrII, SacI, SacII, SalI, SapI, Sau3AI, SbfI, ScrFI, SexAI, SfaNI, SfcI, SfiI, SgrAI, SmaI, SnaBI, SpeI, SphI, SspI, StuI, StyI, SwaI, TliI, TspRI, Tth111I, XbaI, XcmI, XhoI, XmaI, XmnI
| Name | Recognition sequence | Cut positions |
| AatII | GACGT|C | 410 |
| AccIII(BspMII) | T|CCGGA | 558 |
| AciI | C|CGC | 436 |
| AflIII | A|CPuPyGT | 515 |
| AluI | AG|CT | 136, 235, 274, 309, 453 |
| ApoI | Pu|AATTPy | 339 |
| AvaII | G|G[AT]CC | 560 |
| BanI | G|GPyPuCC | 544 |
| BfaI | C|TAG | 44, 401 |
| BsaHI | GPu|CGPyC | 410, 544 |
| BsaWI | [AT]|CCGG[AT] | 558, 607, 657 |
| BslI | CCNNNNN|NNGG | 223 |
| BspEI | T|CCGGA | 558 |
| BspHI | T|CATGA | 621 |
| BspT107I(HgiCI) | G|G[TC][AG]CC | 544 |
| BsrDI | GCAATGNN| | 121 |
| BssSI | C|TCGTG | 194 |
| Cac8I | GCN|NGC | 525 |
| DdeI | C|TNAG | 283, 307 |
| DrdI | GACNNNN|NNGTC | 122 |
| EaeI | Py|GGCCPu | 198, 693 |
| EcoRI | G|AATTC | 339 |
| Fnu4HI | GC|NGC | 632 |
| HaeII | PuGCGC|Py | 544 |
| HaeIII | GG|CC | 197, 692 |
| HhaI | GCG|C | 543 |
| HinP1I | G|CGC | 543 |
| HincII | GTPy|PuAC | 253 |
| HindIII | A|AGCTT | 137, 236, 310 |
| HinfI | G|ANTC | 323, 363, 424, 554, 570, 603, 677 |
| HpaII | C|CGG | 557, 606, 656, 690 |
| Hpy188I | TCN|GA | 243, 314, 335, 644 |
| Hpy99I | CG[AT]CG| | 23, 114 |
| HpyCH4III | ACN|GT | 594 |
| HpyCH4IV | A|CGT | 409 |
| HpyCH4V | TG|CA | 107, 480, 501 |
| KasI | G|GCGCC | 544 |
| MspI | C|CGG | 557, 606, 656, 690 |
| MwoI | GCNNNNN|NNGC | 115, 171, 317, 436, 534 |
| NarI | GG|CGCC | 544 |
| NlaIII | CATG| | 514, 620 |
| NlaIV | GGN|NCC | 373, 544 |
| NspI | PuCATG|Py | 515 |
| PciI | A|CATGT | 515 |
| PsiI | TTA|TAA | 639 |
| RsaI | GT|AC | 211, 226, 286, 517 |
| Sau96I | G|GNCC | 560 |
| ScaI | AGT|ACT | 287 |
| SfoI | GGC|GCC | 544 |
| SmlI | C|TPyPuAG | 130 |
| Taqƒ¿I | T|CGA | 325, 572 |
| TfiI | G|A[AT]TC | 323, 363, 424, 554, 570, 603, 677 |
| TseI | G|C[AT]GC | 632 |
| Tsp45I | |GT[CG]AC | 19, 267 |
| Tsp509I | |AATT | 338, 684 |
Click here to view TAIR data
>AT3G58780.2 length:726
ATGGAGGAAG GTGGGAGTAG TCACGACGCA GAGAGTAGCA AGAAACTAGG | 50 |
GAGAGGGAAA ATAGAGATAA AGAGGATAGA GAACACAACA AATCGTCAAG | 100 |
TTACTTTCTG CAAACGACGC AATGGTCTTC TCAAGAAAGC TTATGAACTC | 150 |
TCTGTCTTGT GTGATGCCGA AGTTGCCCTC GTCATCTTCT CCACTCGTGG | 200 |
CCGTCTCTAT GAGTACGCCA ACAACAGGTA CAAGAAAGCT TGTTCCGATG | 250 |
CCGTCAACCC TCCTTCCGTC ACCGAAGCTA ATACTCAGTA CTATCAGCAA | 300 |
GAAGCCTCTA AGCTTCGGAG GCAGATTCGA GATATTCAGA ATTCAAATAG | 350 |
GCATATTGTT GGGGAATCAC TTGGTTCCTT GAACTTCAAG GAACTCAAAA | 400 |
ACCTAGAAGG ACGTCTTGAA AAAGGAATCA GCCGTGTCCG CTCCAAAAAG | 450 |
AATGAGCTGT TAGTGGCAGA GATAGAGTAT ATGCAGAAGA GGGAAATGGA | 500 |
GTTGCAACAC AATAACATGT ACCTGCGAGC AAAGATAGCC GAAGGCGCCA | 550 |
GATTGAATCC GGACCAGCAG GAATCGAGTG TGATACAAGG GACGACAGTT | 600 |
TACGAATCCG GTGTATCTTC TCATGACCAG TCGCAGCATT ATAATCGGAA | 650 |
CTATATTCCG GTGAACCTTC TTGAACCGAA TCAGCAATTC TCCGGCCAAG | 700 |
ACCAACCTCC TCTTCAACTT GTGTAA | 750 |
>AT3G58780.2 longest ORF length:241
MEEGGSSHDA ESSKKLGRGK IEIKRIENTT NRQVTFCKRR NGLLKKAYEL | 50 |
SVLCDAEVAL VIFSTRGRLY EYANNRYKKA CSDAVNPPSV TEANTQYYQQ | 100 |
EASKLRRQIR DIQNSNRHIV GESLGSLNFK ELKNLEGRLE KGISRVRSKK | 150 |
NELLVAEIEY MQKREMELQH NNMYLRAKIA EGARLNPDQQ ESSVIQGTTV | 200 |
YESGVSSHDQ SQHYNRNYIP VNLLEPNQQF SGQDQPPLQL V | 250 |