fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G60630 ATHAM2, LOM2 LOST MERISTEMS 2, ARABIDOPSIS THALIANA HAIRY MERISTEM 2, GRAS family transcription factor (.1)

>AT3G60630.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, XbaI
Name Recognition sequence Cut positions
BamHI G|GATCC 396, 436, 555, 639, 1079
BglII A|GATCT 120, 1159
EcoRI G|AATTC 1222
EcoRV GAT|ATC 1099
HindIII A|AGCTT 1257, 1683
NcoI C|CATGG 102, 1397
SacI GAGCT|C 757, 1138, 1228, 1294
StyI C|C[AT][AT]GG 102, 1397
XhoI C|TCGAG 1054, 1549


Click here to view TAIR data

>AT3G60630.1 length:1872
ATGCCCCTGC CCTTTGAGCA ATTTCAAGGG AAGGGGGTTC TGGGTTTCTT 
50
AGATTCTTCT TCTTCTCCGG GATACAAAAT CTGGGCTAAT CCAGAGAAGC 
100
TCCATGGACG AGTAGAAGAA GATCTCTGCT TTGTTGTCAA CAATGGTGGT 
150
TTCTCGGAGC CGACGTCTGT TTTAGACTCT GTTAGAAGTC CAAGCCCTTT 
200
CGTCTCTTCT TCAACCACCA CGCTGTCTTC TTCTCACGGT GGTCCCAGCG 
250
GCGGCGGCGC TGCTGCTGCT ACTTTTTCCG GCGCCGATGG GAAATGCGAC 
300
CAAATGGGTT TCGAGGATCT CGATGGTGTT CTCTCCGGTG GCTCGCCGGG 
350
ACAAGAACAG AGTATTTTTA GATTAATCAT GGCTGGCGAT GTAGTGGATC 
400
CGGGTTCGGA GTTTGTGGGT TTCGACATCG GTTCTGGATC CGACCCGGTT 
450
ATTGATAATC CTAATCCACT CTTTGGATAT GGCTTCCCTT TTCAAAACGC 
500
ACCGGAAGAA GAAAAGTTTC AGATTTCAAT AAACCCAAAT CCGGGTTTCT 
550
TCTCGGATCC TCCGTCGTCT CCTCCTGCGA AACGGCTCAA TTCGGGTCAA 
600
CCCGGATCTC AACACCTCCA GTGGGTTTTC CCGTTCTCGG ATCCGGGTCA 
650
CGAATCTCAC GACCCGTTTC TCACACCGCC AAAGATAGCC GGAGAAGACC 
700
AAAACGACCA AGACCAGTCA GCGGTAATCA TCGACCAGCT ATTCTCTGCG 
750
GCGGCGGAGC TCACCACAAA CGGCGGAGAT AACAATCCCG TTCTCGCGCA 
800
AGGGATATTG GCGCGGCTCA ATCACAACCT TAACAACAAC AACGACGACA 
850
CTAACAACAA TCCTAAACCT CCGTTCCACA GAGCAGCTTC GTATATAACA 
900
GAAGCTCTTC ACTCTCTCCT TCAAGACTCA TCATTATCAC CACCGTCTCT 
950
CTCACCTCCT CAAAACCTAA TCTTTCGGAT CGCAGCTTAC AGAGCTTTCT 
1000
CAGAAACGTC ACCGTTTCTT CAATTCGTCA ACTTCACAGC AAACCAAACG 
1050
ATTCTCGAGT CATTCGAAGG GTTTGATCGG ATCCACATTG TCGATTTCGA 
1100
TATCGGTTAT GGAGGTCAAT GGGCGTCTCT GATTCAAGAG CTCGCCGGAA 
1150
AAAGAAACAG ATCTTCATCA GCTCCGTCGC TAAAGATTAC AGCTTTCGCT 
1200
TCTCCTTCAA CTGTCTCCGA CGAATTCGAG CTCCGATTCA CTGAAGAAAA 
1250
TCTCAGAAGC TTCGCCGGCG AAACAGGTGT CTCCTTCGAA ATCGAGCTCT 
1300
TAAACATGGA GATTCTCTTG AATCCAACTT ATTGGCCACT GTCTTTATTC 
1350
CGATCATCGG AGAAAGAAGC AATCGCTGTG AATCTCCCAA TCAGCTCCAT 
1400
GGTCTCCGGT TACCTCCCAT TGATACTTCG TTTCCTCAAG CAAATCTCAC 
1450
CAAACGTCGT CGTTTGCTCA GACAGAAGCT GCGACCGTAA CAACGACGCG 
1500
CCGTTCCCTA ACGGTGTGAT TAACGCGCTT CAGTACTACA CATCTCTGCT 
1550
CGAGTCTCTC GACTCTGGGA ATCTGAATAA TGCGGAAGCT GCTACGAGTA 
1600
TTGAGAGGTT TTGTGTGCAA CCGTCGATAC AGAAACTGTT GACGAATCGT 
1650
TACCGTTGGA TGGAGAGATC ACCGCCGTGG AGAAGCTTAT TTGGGCAATG 
1700
TGGGTTTACT CCTGTGACGC TGAGTCAGAC GGCGGAGACA CAAGCGGAGT 
1750
ATTTGTTGCA GAGGAATCCA ATGAGAGGGT TTCACTTGGA GAAGAGACAG 
1800
TCTTCGTCGC CTTCACTTGT CTTGTGTTGG CAGAGGAAAG AACTTGTTAC 
1850
TGTCTCAGCT TGGAAATGTT AA
1900

>AT3G60630.1 longest ORF length:623
MPLPFEQFQG KGVLGFLDSS SSPGYKIWAN PEKLHGRVEE DLCFVVNNGG 
50
FSEPTSVLDS VRSPSPFVSS STTTLSSSHG GPSGGGAAAA TFSGADGKCD 
100
QMGFEDLDGV LSGGSPGQEQ SIFRLIMAGD VVDPGSEFVG FDIGSGSDPV 
150
IDNPNPLFGY GFPFQNAPEE EKFQISINPN PGFFSDPPSS PPAKRLNSGQ 
200
PGSQHLQWVF PFSDPGHESH DPFLTPPKIA GEDQNDQDQS AVIIDQLFSA 
250
AAELTTNGGD NNPVLAQGIL ARLNHNLNNN NDDTNNNPKP PFHRAASYIT 
300
EALHSLLQDS SLSPPSLSPP QNLIFRIAAY RAFSETSPFL QFVNFTANQT 
350
ILESFEGFDR IHIVDFDIGY GGQWASLIQE LAGKRNRSSS APSLKITAFA 
400
SPSTVSDEFE LRFTEENLRS FAGETGVSFE IELLNMEILL NPTYWPLSLF 
450
RSSEKEAIAV NLPISSMVSG YLPLILRFLK QISPNVVVCS DRSCDRNNDA 
500
PFPNGVINAL QYYTSLLESL DSGNLNNAEA ATSIERFCVQ PSIQKLLTNR 
550
YRWMERSPPW RSLFGQCGFT PVTLSQTAET QAEYLLQRNP MRGFHLEKRQ 
600
SSSPSLVLCW QRKELVTVSA WKC
650