fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G62090 PIF6, PIL2 PHYTOCHROME-INTERACTING FACTOR 6, phytochrome interacting factor 3-like 2 (.1.2.3)

>AT3G62090.2 genomic map

>>Show CDS map




Uncut enzymes: AscI, BamHI, BglII, HpaI, NheI, NotI, SacI, SalI, SmaI, XhoI
Name Recognition sequence Cut positions
ApaI GGGCC|C 3463
EcoRI G|AATTC 5616
EcoRV GAT|ATC 950, 4931, 6394
HindIII A|AGCTT 562, 2609, 4480, 4788, 5031
KpnI GGTAC|C 3305
NcoI C|CATGG 4352, 5790
NdeI CA|TATG 1407
PacI TTAAT|TAA 715
PstI CTGCA|G 6315
PvuII CAG|CTG 7517
SpeI A|CTAGT 5899
StyI C|C[AT][AT]GG 4352, 5790
XbaI T|CTAGA 1219, 4735, 6047, 6570


Click here to view TAIR data

>AT3G62090 genomic sequence (4215-4649,4733-4840,4919-4984,5087-5152,5248-5613,) length:7662
tcttaatcag aatttctgta tcttttcatg gcagagacca aaacacatca 
50
tattggtgat cttagtctta tccgtcgtta gtattcaaaa tagtgacttt 
100
aataaatgct tctctttggt tggcacacca agattctatt tgtgtaatat 
150
tcattggatt tagatagaaa catgtatgtg gtatagtcaa ttcggttgat 
200
atattaaact ttggtcacca gaaaaaagtg catgcttctt ggttttgtac 
250
gttacatgta ataaattaga agcgaagaaa caaatagagg ggaatataga 
300
aaaagaaaga aaatgagaga agggaagcAT GAGTAATGAA TGCGTAACCT 
350
TAAAGAGAGG AGCTAATGAG AGATGCTTCG CCTATGGACT AAGGACTGAG 
400
GATACGTCAC AATTCTCACA CTCCAAAACA TACATATAGt tttgcaagca 
450
cgagacagta aacactatcg acaacatttc acgttcccca cgtcacgtgc 
500
ctttttccac gtgtctcctc actttgtcgc ctccacttcc actcttctac 
550
aatcactcct taagcttctt catgacctac caatcaatat gattagaact 
600
ctttgttctc tcttttataa ttggaagatt ttgtccaaag ttatttttac 
650
aatcaaatca tattccattc cgtcttttag tttatatgta caacgtaact 
700
tgtttcttat ttttaattaa tggttttaga acttaaagtt ttacggatta 
750
caaatagtat tcttaagtat taaagtgttt ttcatattat atatagtttt 
800
ttaaaataat ttgaaacgat cctgaatctc ttatcaagtg tctttatcat 
850
tgagccaaaa acatatatag tatacacatt catacaaatc ttttgaaccc 
900
gaaacatcca aacaatgtcg ttatcacaat aaccgacatg tattgcgtag 
950
atatcgtttg gtttgaagaa acaaatagat actattagaa agaagaagag 
1000
aaaaagattt agcttgaacc aaaagaaact ccaaacatga tttttgagag 
1050
agaaaaaaaa aaagggaaac tgataaagaa gagatatgtt ccccaccacc 
1100
cctaccatta tcatcacaat ttcctcactt ttttttcttt cttcttcaaa 
1150
cttttttctc cacaccattc tttgtcccct ttgttttttt tttttgtatc 
1200
ttgtactcgt cttttgtttc tagataacca atatgttatt acatgtattt 
1250
ggtcaagtat tttctttgaa taacgtataa aattctggaa agcgaacata 
1300
gatagtaaaa acaagaaaaa aatagagtca attctaagta aattaaatcc 
1350
tatttgtgaa agtataaaaa caatactaaa agaaaattgg agaattgaga 
1400
tttcaccata tgtacataga aatgaaattc aaaagaaaaa cagtgattct 
1450
cagattttca aggcactcat agttttttag tttcaagatt taatgataat 
1500
gtctcgtcct tttacaaatc attaagttgt aagagagttt tgcttctttt 
1550
tgaaagaaaa aaaatactac tcataattta ctttatgttt atcataaatt 
1600
atgataactc gactttactg caatgtgttt gcttgtcagt aaaaacatgg 
1650
gctggcttca aatccggatg attgcatgtc tcgtgactct tttgtagcct 
1700
ctcttgttgg ccaactcatt ccattttctc gttttaggct ctttcttttt 
1750
tttagtcaca aagttgacca taccaacatg caagaccaat tattatatct 
1800
ctttttgaca taaaccaatt attatatctt caaaattaga ggtttttgac 
1850
caccactctg atatattttt ggcttcgaaa ccaaccaaca aaaaacatag 
1900
cggtttaaaa attaaaaaac cgtctttatc ataaaccaaa ccataaaatg 
1950
cagtgattca ccttctaatc ttctgtttga cgtacaagtg ataaatgact 
2000
tcaaagctac tcccgtttct ttacgagtga tttcatttca tcataaagaa 
2050
atatgtgttg ctcttgttct tagaaaatta tttctcccag tcctttacaa 
2100
taatgtagat ttcttctgtt agtatgataa atatatatat gattgaatgt 
2150
atatatttaa catgttttac gaaaaaagtc agtgtatact atttatggga 
2200
aaagtatcac taacttcgaa atatagttga tatttgttag ttttatgtct 
2250
actttaattt aagtcattta atcaaaaatt ataatgttga ggtccataaa 
2300
ctttaaaagt cccaataatg tgtaattaag ttttagaaag aatacttatt 
2350
ggattttcat ctatgactct atttagaaaa gttgtgtcta cagtgactag 
2400
ctgcaaaaaa aaggttatgt atagtatcga ttgcccctta aaacggagtg 
2450
aaaacatgtt ttcttgaatc aaatccaaag tttacaaaat agaggaagat 
2500
ttagatatgg tctctaaagt ctaaagtagt ctaggactag gagggcaatc 
2550
ttgtgaggta ttagtgatgt tcttttcatg tatttaatat ataaatgtaa 
2600
gtttgctgaa gcttaataca ttaatgaata tgaatgcatg aaaactcgat 
2650
aaagcaagat acgtgcgtgt tactactatt tgaggtttcg ttcgtgcctt 
2700
ttagaataga cctattgata ctatatttta tttcaataat ttgggttaga 
2750
ttacgcgcta accccgtgat tgatttgttt tttttttgtc tttaataata 
2800
ataattaccg aatcttaaaa catgataatg atacgtgtgg gtgtgtgaca 
2850
ttatgttctc ttttaagatt ctatatgacg tcatttccct tccaaatgac 
2900
atttgatttg cccttgtgcc gatgcatagt tttaggctct atctctttcc 
2950
ttttttcgtg atgacaaggt taaagcctta taacctcttg gcccaataaa 
3000
tttgtatttg tatatgtaat atgttagatc aaaatgtttt actgtgcaat 
3050
gttattttac ttggtttaat atttcaaacg acaatgttac cctgaaatag 
3100
tataatagct agagatccct acttgtaaat atcaaaacat tgaaaactat 
3150
ttttctgaat catttggtgt aaccggctaa gttatattat tggtcggaca 
3200
ccaaatatta tagaatagaa aaataaaata aaataaaagg atgcatgagt 
3250
gagtcatttg ttatggaaga gtagtgagga caagtgtcta atacactgca 
3300
tacgggtacc cccaaaaaaa aaaacacaaa ggtacattga atcacgtggc 
3350
tttcacgtga acttcacgct ctgctttttt tacttcttcc attgtttggt 
3400
ctactttttc ctttcaagag aatgctgcca aacaccttgt aggtcctatc 
3450
aatatttttt gtgggcccag cccattcctt attgttcttg tactgtgaat 
3500
gttcttccca caaccacgtg ggctttttgg cccgttctct ctctctctcc 
3550
tccccaacac tttttttttt gtcgtactat cggtttgtga aacagagatt 
3600
tgttgtttca ctgatgttta caaaagatat ttgtctatgt tgtggcaatc 
3650
tgatattctg acggatgtct attattatat ttttaagtcc tttctatttg 
3700
tattttatgt gatttcgttt ttggaaacga catcccttgc atttaaataa 
3750
tctttttata atttataaag gcacaataaa gtatcaaaaa aaaaatctca 
3800
aagatgctaa gattcgactt atataaacag tggtactgta caacaggaaa 
3850
ttcattgcac ctgaaaaaat aattaaaaac aggtgaaaga gataataata 
3900
ccaaaaaaat gaaaaggaaa gaaaagcgaa atataaaata agagcaaaag 
3950
agtctgaagt tgatcaacaa aagaaagatt agctttcact tacttccact 
4000
gaagaaataa cttttggaac attcaacaag acaacaaaat atgacttccc 
4050
catcatccac cttcagacca aattaagttc ttcaatcttg tttccctgtt 
4100
tcacacacat atatatatat atatatatat atatatatat atgtgtgtgt 
4150
ttgtgtgcag acgatgatgt tcttaccaac cgattattgt tgcaggttaa 
4200
gcgatcaaga gtatATGGAG CTTGTGTTTG AGAATGGCCA GATTCTTGCA 
4250
AAGGGCCAAA GATCCAACGT TTCTCTGCAT AATCAACGTA CCAAATCGAT 
4300
CATGGATTTG TATGAGGCAG AGTATAACGA GGATTTCATG AAGAGTATCA 
4350
TCCATGGTGG TGGTGGTGCC ATCACAAATC TCGGGGACAC GCAGGTTGTT 
4400
CCACAAAGTC ATGTTGCTGC TGCCCATGAA ACAAACATGT TGGAAAGCAA 
4450
TAAACATGTT GACGATTCTG AGACTTTGAA AGCTTCTTCA TCAAAGAGGA 
4500
TGATGGTTGA TTATCATAAC CGAAAGAAGA TCAAGTTTAT ACCTCCTGAT 
4550
GAGCAATCCG TGGTTGCTGA TAGGTCGTTC AAATTGGGCT TTGACACTTC 
4600
CTCCGTAGGT TTCACTGAAG ACAGTGAAGG ATCGATGTAT CTAAGCAGTg 
4650
taagagggat tgattcacaa tttttttggt ttggtctatc ttgttaggtt 
4700
cttgtctgaa gacaggtttt gtctcaacgc agAGTCTAGA TGACGAGTCA 
4750
GATGATGCGA GGCCACAAGT TCCTGCAAGA ACAAGAAAAG CTTTGGTCAA 
4800
AAGAAAACGA AATGCAGAAG CGTATAATTC ACCTGAGAGA gtaagtaatc 
4850
tctttaagat acaaagcata gtgaacactg aatctgatac aacggtataa 
4900
tggtattgtg caacacagAA TCAAAGAAAT GATATCAACA AGAAAATGCG 
4950
TACTTTGCAA AATCTACTAC CTAACTCTCA CAAGgtttat cataagaacc 
5000
aactttttca tttatttcga aagagatcaa aagcttttta aagagtctat 
5050
acttacattt ccctaaatac tcaatattgt ccatagGACG ACAACGAATC 
5100
GATGTTGGAT GAAGCAATCA ATTATATGAC AAACCTTCAA CTTCAAGTTC 
5150
AGgtataata aacaaatact tcaaacactt tttcacatca aaaacagatt 
5200
caatctaaag attctttgtc ctaacctgta taaatgttgg atggtagATG 
5250
ATGACGATGG GTAACAGATT TGTTACACCA TCAATGATGA TGCCTTTGGG 
5300
GCCGAACTAC TCTCAGATGG GTCTAGCAAT GGGTGTGGGA ATGCAAATGG 
5350
GCGAACAACA GTTTCTGCCT GCACATGTTC TAGGAGCTGG CTTGCCTGGG 
5400
ATTAATGATT CAGCAGATAT GCTAAGGTTT CTTAACCATC CTGGACTAAT 
5450
GCCAATGCAA AACTCTGCAC CTTTCATTCC AACGGAAAAT TGTTCCCCAC 
5500
AATCTGTCCC TCCATCGTGC GCTGCTTTCC CTAACCAAAT ACCAAATCCC 
5550
AACTCTTTGT CAAATTTAGA TGGTGCAACC TTACACAAGA AATCAAGGAA 
5600
AACTAACAGA TGAaggaatt ctccctggta aaaatctgga aacccgtgag 
5650
cagatgaagt aaacagtgat gattgttacc tgcggattca cggtcttctt 
5700
cttcatgagt tagtcgtgag aacactagag ccatctcaag gtgaaccata 
5750
cagatccaca aaagcactac aacgacatca gaacaactac catggaagga 
5800
tctcctcaag gttctctttt ttagtgccgg cttttctagt tcatgtaaca 
5850
tatagatata ggaaaggagc tataataata acaataataa tcacgagtac 
5900
tagtttcctt cgaatgaata agactgcatg ttagaaacat taataaatta 
5950
tcgaacacta tcggagtgat aaaaatcata actcgacgtt cctctctgtt 
6000
tatgaaacaa gctgctgact ttatacaatg gagtgaagct attgtttcta 
6050
gaatccaaac aagaggcata gcatacaaat actcaactca ctttacccgg 
6100
ttctattcta tttatatgat actgagtgta tttcttcact aagaacaaca 
6150
ggaagagaag agatcgcacc gcaatgaaga tgcattgttc agCTATGCTG 
6200
CTTCAAGAAT CTTTTTTCCG CTATCTTTCA TCTGAGCTGG CTCAGTAGCT 
6250
TGCTCTTCCA ATGTTTGTTT CGTCTTGCCA AGTTTAAGCT CTGAGAACAT 
6300
CTCAGTCAGT GAATCTGCAG TATCTGAAGT CGCTGGTAGG ACCTGAGAAC 
6350
TTTCACTTTC AAGGTCCATC TCTAGTTCCA GTAATTCTTC TTCGATATCT 
6400
TCATCATCAA TATCTGGATA TGGAGCTGAT Tctgccgcat taacagaaaa 
6450
aatctagcta aacacaaaag ttgatgaagt aatcgtgtat gtatgtttaa 
6500
acgacaaaac accacttacC GAGAGCTTTT TCGACTTGCT TCTGTGATTC 
6550
AATAGTTTCC TCAAGTTCTT CTAGATAGTC ATGAACATCA TCTGCACTGA 
6600
TCTTGATGTC CTTCATAACC CTAGCTCCAG TTTTAATTGC TTCTGAGACc 
6650
tgccaaacac acatagatac ttctaaaatc cataattgat actattacat 
6700
agacccaaac atggtcgttc gacctatggg gtttctcagt gtttgaagta 
6750
cCATTTTCGT AGATTCGGAA TCCGCTATAG TGTTCAACAC TTCTTCTACT 
6800
CTGTTCAGAA GTGACGTGCA TTTTTCTCTG CTCTCAGTCA CCACCTTCAA 
6850
TTCCCTTGCA TGCCTTAGAG CAACTTTCCT GTGTCCAGAC TTTAGAGATG 
6900
CCAGCGCTGA TTTCTTTGAC ctacaaaagg gaaaagaacg tttaaaaaca 
6950
cttgaagtca atctatttaa ccatttacaa aaaagataag ccaagttata 
7000
tttttcaagg ctatgatcca tgtacgagaa aattgaacca tttggataca 
7050
gatcaagaat cagaaggtgt tacTTTTCAC AACGTTGGTC CATCACTTCA 
7100
AGTTGATCTT GGAGCTTTTC TGTAGTCCTT AGCAAGTGCA GAATATCACA 
7150
GTCTAAAGTT GAGATACCGG GAAGTGCTGT TTGTGAAAAG GACACCTTAA 
7200
CACCctgtaa agcaaagtat gtaggattcg gacactatgc ataggtcatg 
7250
gcctgaactg agtctaactt tctaaatttg tcaaattggc ctctttcttt 
7300
ttatttttca ctggaatttt gagtgcttat caaaattcaa gcaagatatt 
7350
tttacatgca tttattgacc agatatacta acagactaac aaatctctcc 
7400
atcagagagc tgagacaaga ccaaaaaaag atggataaat aaccaaacCT 
7450
CAATCAGTTC TCCCCGATTG ATAGAGATTT TATGCGCTTT TCCACACCCT 
7500
GACAAGTGAC TCAAAACAGC TGAAGCCTCA TTCGAACCGT TGCACAAATT 
7550
CCGAAACTTC TTCAGCGTGA CAACACAAGT AGAAGTCCAG TGTCCCTCAG 
7600
ATAATATCTT CACCACGTCA GCCGCCTTCT Cctagacatc acatagactt 
7650
atttcaatca gc
7700