fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G00180 YAB3 YABBY3, Plant-specific transcription factor YABBY family protein (.1.2)

>AT4G00180.2 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
EcoRV GAT|ATC 436
PvuII CAG|CTG 599
SacI GAGCT|C 110
StyI C|C[AT][AT]GG 138


Click here to view TAIR data

>AT4G00180.2 length:630
ATGTGTGATA TTAATTGGCA GGTGAGTGTT CCTCCGAGTA GTTTGTTCAA 
50
GACGGTGACG GTCAGATGCG GCCACTGTTC GAACCTTTTG TCGGTGACCG 
100
TGAGCATGAG AGCTCTTCTT CTTCCATCCG TTTCCAACCT TGGCCATTCC 
150
TTTTTACCTC CCCCTCCTCC TCCTCCTCCT CCAAATCTTT TGGAGGAAAT 
200
GCGAAGCGGA GGGCAGAATA TAAACATGAA CATGATGATG AGCCATCACG 
250
CTTCAGCTCA CCACCCGAAC GAGCATTTGG TTATGGCGAC TCGCAACGGA 
300
AGATCAGTGG ATCATCTACA AGAGATGCCT CGGCCACCAC CAGCCAATAG 
350
ACCCCCAGAG AAGCGACAAA GAGTACCATC TGCATACAAC CGATTCATCA 
400
AAGAGGAGAT CCAACGTATA AAGGCAGGCA ACCCTGATAT CAGCCACAGA 
450
GAAGCCTTCA GTGCTGCTGC CAAAAACTGG GCTCATTTCC CTCACATACA 
500
CTTTGGACTC ATGGCTGACC ATCCTCCCAC GAAGAAGGCT AACGTGCGCC 
550
AACAGGAAGG AGAGGATGGG ATGATGGGAA GAGAAGGGTT TTACGGTTCA 
600
GCTGCCAACG TTGGGGTGGC CCATAACTAG 
650

>AT4G00180.2 longest ORF length:209
MCDINWQVSV PPSSLFKTVT VRCGHCSNLL SVTVSMRALL LPSVSNLGHS 
50
FLPPPPPPPP PNLLEEMRSG GQNINMNMMM SHHASAHHPN EHLVMATRNG 
100
RSVDHLQEMP RPPPANRPPE KRQRVPSAYN RFIKEEIQRI KAGNPDISHR 
150
EAFSAAAKNW AHFPHIHFGL MADHPPTKKA NVRQQEGEDG MMGREGFYGS 
200
AANVGVAHN
250