fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G00180 YAB3 YABBY3, Plant-specific transcription factor YABBY family protein (.1.2)

>AT4G00180.2 genomic map

>>Show CDS map




Uncut enzymes: ApaI, AscI, KpnI, NcoI, NotI, PstI, SalI
Name Recognition sequence Cut positions
BamHI G|GATCC 7001
BglII A|GATCT 2028, 4831, 7311
EcoRI G|AATTC 2892, 6929
EcoRV GAT|ATC 4027, 5896
HindIII A|AGCTT 1372, 6124, 7758
HpaI GTT|AAC 4857
NdeI CA|TATG 1706
NheI G|CTAGC 1276, 6810
PacI TTAAT|TAA 4492
PvuII CAG|CTG 6550
SacI GAGCT|C 4606
SmaI CCC|GGG 4823
SpeI A|CTAGT 3847, 4485
StyI C|C[AT][AT]GG 1063, 3087, 4634
XbaI T|CTAGA 1561
XhoI C|TCGAG 1981, 2225, 4767


Click here to view TAIR data

>AT4G00180 genomic sequence (4296-4409,4518-4688,4958-5117,5678-5726,5862-5937,6318-6395,6507-6581,) length:8332
ttaacttaat tatgtacacc atcatgtaca ccattatatt aagtaataat 
50
atttggttta tacaatcatt atgtttgtaa aatattaaaa acaatattac 
100
ttctatttat gaatatcggt atacacattt gtacaccaat gaataatggt 
150
tagtgtacaa aacgatcttt gaaatgtttg tgtattaaat tgatgacata 
200
taaatactct aaaagtcaat gtaatttttt aagtaaatta tttaagaaaa 
250
ctaaaataaa aattaaaaag ataaagacaa ataaaataaa gtaaaactgg 
300
tctctaatat tatttttatt ctctctcaag ataaagggta ttatagtatt 
350
tgatatgtat tttgtttttt agtctattag acatatactc tatctcacaa 
400
aaagcaaaaa aagtgtctat atctctaatt tctaaaaaat ttatctactt 
450
tacaaattat ttttgaaaaa gtgtctattt tcccaataat atctaagata 
500
tattataaag atactaactc tccttttaga tggaagatta gagaagactt 
550
ggtatcgtga aacttgactc gtgaaagtgc ttagttagaa catccatcaa 
600
ttgatcttga atatgtaact agaaaatatc caagatattg aagtttcaag 
650
aatcaacttt tctccatgtc acaaggaatt agacgactga agctgcccca 
700
cctgttagca agatgtatat atagtaaacc taataagata ttcaccttcg 
750
tggtgtgctc aatatatgta tggtggtgac tatgtttttt tcttcagttt 
800
agtgtaatag attattgttt tgtcgggaaa agaaactaat tagcaattaa 
850
tatatattga ataaaatgaa caagttagaa atatgttatt ccatccacta 
900
tgtaaagtag ttctggtttg ttagaggtct tgaaaagatg tgatgtcaag 
950
tgaaatgcaa aacggtggca tggcgaagat aagtggctag aaacgggaat 
1000
gttaatgaaa ctaaagagag acatatacac gtgcatatat acactcagat 
1050
gttgattgtt ttccaaggtg tttgtgtgag aaatgacatc tctctctctc 
1100
acccattcag gcggtggaaa aattcaataa cacttttaaa aaagattttt 
1150
gttcaatagg ttttgacctg aaaatactta gaacaaaaaa taacacaaga 
1200
gggaaagtgc cgtaaaagta aaaaaagaaa aaaaaaaaga gagagatcat 
1250
gtcgctgaca tactatacat gcctagctag ctcggtacat ttatatataa 
1300
tgtttgtgtg taaggtagat tgagatatat gaatggtcaa atcggaaata 
1350
aaacagtata tgttcttaaa taagcttctc ctttgttcaa cttttttgct 
1400
ttcatttccg ttacatgatt tcgcgattaa ttacttttta taattagtca 
1450
acttcgacgc cttgtgtcgt cctcgatttt aatgttctgt ctttctctgc 
1500
attcatagtt tatcttattt catttcatat ccttacttct tttttctaca 
1550
aacaataatt tctagacgaa ttgaaacaaa tttccaaaac tttatgagta 
1600
tatataggat atttttagtg gcaaaggacg acttaaattg taacgaaaag 
1650
aatttgaact tttttccatt agtccctacg atgaatattt catcctatag 
1700
aacatcatat gaattgatta cttaatgaag ttaaattttt gaaaactcta 
1750
ttagggacaa tgtcccacat cggaagttga gtaggatctt aagtggtata 
1800
tataagatat gagcctctcc acctattgcc aattagtttt acgttggaag 
1850
cccacagtct gatatggtat cagaccccga tccgcacata ctcaacccga 
1900
tccacatcgg tccggcccaa tacttggccc gccgatccat gcccaaacat 
1950
atcgagatca atggctagaa gaaccatcat ctcgaggggg cgtattaggg 
2000
ataatatccc acatcggaag ttgaataaga tcttaagtgg tatatataag 
2050
atatgggcct cttcacctat tgccaattgg ttttaggttg gaaacccaca 
2100
ctctaatatg gtatcagagc ctgatccgca catactcaac ccgatccaca 
2150
tcggtccggc ccaatacttg gcccgccgat ccatgcccaa acatatcgag 
2200
atcaatggct agaagaacca tcatctcgag ggggcgtatt agggacaatg 
2250
tcccacatcg aaagttgagt aggatcttaa gtgatatata taagatatga 
2300
gcctttccat ctattgccaa ttggttttat gttggaagcc cacactctaa 
2350
taaactcaat acaaatacta aagttgcaaa caactatact atatttgctt 
2400
gaagttctat tgtgatagga ttttgactta caaaaatcat attctatgtc 
2450
tacactatat attgtgaaac cggatagcca taatatttac aaaaacttaa 
2500
actaatttca gatataaata aatttaaatt tcactatgac ctagtaatta 
2550
tcacgaacaa ttgggaagtt accacaaaat ggtggtcctg tattatggaa 
2600
tttagcgaaa ccacacactt gcgggtaaaa ataatgatga caaaatgata 
2650
tacattggaa tgtagagaaa gtatatacaa atactaataa atagaaaagg 
2700
gcatggaatt gacgaggatc gagggaaagt gtggtgtggc agaaatgtta 
2750
ttaagtgtga aaacaactga tgaatgagcc tttgcttaat cacttccatg 
2800
cacaagtccc tttcctcttc ctctctctcc cacttcatcg aactttgcgt 
2850
cctttaaaga aaagaaaaaa caaaacattt ttcatccaat tgaattcaaa 
2900
ccgtaaccag attagattta acttcgttta ttttacatta tcttcttctt 
2950
cttattttgc ggagaagact tgtacaatga cctcaatacg ctgaagagtt 
3000
ggattcactg cgagtgtata tgtgcatata gaaacaaaat atctagctat 
3050
atgaccactt ttaactctaa atatgggtgt aatatgccaa ggactttctg 
3100
gagatccacc acaacacaca ttcaagttca agttctgctg cttttaggtc 
3150
tatgaaaaca acaccaacct tattttcata ttgttctctc tttatctcat 
3200
gcataagtat attttcatat tgttccctct ttattttcat gcttttagtt 
3250
gatatttttt ttgttattgt attatcatta gtgcgacgac acaaagtcac 
3300
aaaccatgta acaaaatgct taaccaaaat agaaaacctt aacaattcca 
3350
atatattttc tgttattgca ttatcaatta tcatcaaatt tttttccact 
3400
gttgcattat catcattgcg acgacacaag gtcacaaacc atgtaacaaa 
3450
atgcataacc aaaatagaaa accttaacaa ttccaacttt aacatgtgaa 
3500
ttaatattat cttaattttt ggatgttcga cattcaaata aactcctaat 
3550
taaaccctat agatatggtt aatcttctat acatgtgtca cgtacgacac 
3600
ttattagcca aattgaagtt ttgttttttc cgcaaatata taagcggttt 
3650
aaatagttgg taaaaaaaaa aaaaagttag catgtttgtc gtatgtacat 
3700
gtttgatgct gcacaaatct tgtcgttata aaactttgaa atctttatat 
3750
ctattattcc tcaccgatcg gctactaatt caatggtact tgataatgat 
3800
aattagtccc aaagtagagt ttttatctga ttatatagaa acaaagacta 
3850
gttccggttt gatatataga agaaagaaaa aggatggata ggaataataa 
3900
agaagataaa ccggttcaaa aggtagtaaa tgagaatgca ggtatgcagc 
3950
ttatctctac aatggcctct tcatcacatg tcgccaattt gtttaggtac 
4000
agtgtctctt catatttaca taaatagata tctctctctc tctctctctc 
4050
taaaccacat cttcctctcc accgttcttt ctcttccttc tctctctgga 
4100
cttcaacttc tggagaagta caagacattt ataaagtact gctcatcacc 
4150
caacactaaa cacaattgtc aaaagggtgt ggtggaagga gaatctactt 
4200
ctatctgaac atcgatcagt catatctttt caatcaaatc aaagccctcc 
4250
tctctctctt actccttttt tgttttaaat caagaaaaag actccATGTC 
4300
GAGCATGTCC ATGTCGTCCT CCTCAGCTCC AGCTTTTCCA CCGGACCACT 
4350
TCTCATCTAC GGACCAGCTC TGTTACGTCC ATTGCAGCTT CTGCGACACT 
4400
GTCCTTGCTg taaattttgg attattctta tatctcatct caatatttca 
4450
aatttataac tctagctagg gtttcacatg aattactagt taattaatgt 
4500
gtgatattaa ttggcagGTG AGTGTTCCTC CGAGTAGTTT GTTCAAGACG 
4550
GTGACGGTCA GATGCGGCCA CTGTTCGAAC CTTTTGTCGG TGACCGTGAG 
4600
CATGAGAGCT CTTCTTCTTC CATCCGTTTC CAACCTTGGC CATTCCTTTT 
4650
TACCTCCCCC TCCTCCTCCT CCTCCTCCAA ATCTTTTGgt acatcggttt 
4700
cattcatcga aacaaattag ggttctttca taaaaaaaac agagagtaat 
4750
aattagggct tttcttctcg agaaacgcaa aattgtgaaa ctcaatccaa 
4800
aaatgtttaa ttttgttagc atcccgggat agatctaagt agtttggcaa 
4850
tggctagtta actagggttt ctttcgaaaa catcatatca aagtagtttg 
4900
gtttgattag tgttttaagt tttttttgcc aattagtttg ctgatttcat 
4950
ttattagGAG GAAATGCGAA GCGGAGGGCA GAATATAAAC ATGAACATGA 
5000
TGATGAGCCA TCACGCTTCA GCTCACCACC CGAACGAGCA TTTGGTTATG 
5050
GCGACTCGCA ACGGAAGATC AGTGGATCAT CTACAAGAGA TGCCTCGGCC 
5100
ACCACCAGCC AATAGACgta accttccatc ttctactctt tatttcaaca 
5150
tcttcatata tatatatata agaaaacaaa aaccctaatt cacaaaacct 
5200
tatccattca tttcttcaac cttttatata tacactccaa agaatctcgt 
5250
ttgtttataa tgaatttata agttttgatt tcatttttgt tccctcggta 
5300
tgtgacttct cgcatgcact ttttttttgg tcagaaaaca atttcgacaa 
5350
caaaaggaaa attaataagt gatgtgttta tcccccggaa atctagctaa 
5400
acctatagat gccaactgat atagttttgg gggtagatcg taagaaagat 
5450
aatgatgaag tgatgatgat aacgagcaaa gtgagaggga gagggagaga 
5500
gagaaaggag gaagagtcga agagtgattg tttttttttt tttaattgtt 
5550
tttttttggt gaatttttag attttttggg gaggcacaat aaaaaccaat 
5600
aatgtttttt ttaacaaaag ggtttgattt ggaattaaaa ttgaatatgt 
5650
tctgtttgtt tgtttgtgga aaagcagCCC CAGAGAAGCG ACAAAGAGTA 
5700
CCATCTGCAT ACAACCGATT CATCAAgtaa taagtttatt cctttgctta 
5750
aaatggcata attaaatttc cctaattaac cattttactc atataattaa 
5800
gggtcgatag atgtgacaga tttgatttca ttatatgata taaaaataaa 
5850
aatgttgaca gAGAGGAGAT CCAACGTATA AAGGCAGGCA ACCCTGATAT 
5900
CAGCCACAGA GAAGCCTTCA GTGCTGCTGC CAAAAACgta ccatttcttt 
5950
ttttaatata taaaactaat tttctatatt gcattatatc cataatcata 
6000
caatctcatt ttagtcttta tgaattgaac ctagctagat tattgtggag 
6050
ctacattgat actcacattg ctttaaatta aaaacataaa acaaaatagt 
6100
taccgtaata atccataatt cataagcttt atccagcata cattagctag 
6150
gactagcctt aggatctacg atctagggtt tcagtaaagt tccctagcag 
6200
atattttagt ctggctttgt attcgtatat ttttgaccaa gtttttatgt 
6250
tatgtataag ataaatacac attaatgtta aaagagctaa gtatatgatg 
6300
taatatgtat gaaacagTGG GCTCATTTCC CTCACATACA CTTTGGACTC 
6350
ATGGCTGACC ATCCTCCCAC GAAGAAGGCT AACGTGCGCC AACAGgttac 
6400
ttactactac tacactatat ttatttattc aaatgtatat aatcaggagc 
6450
atgcatgcat tgatcatcaa aacataatcg agatatttta ttttggtgta 
6500
atgaagGAAG GAGAGGATGG GATGATGGGA AGAGAAGGGT TTTACGGTTC 
6550
AGCTGCCAAC GTTGGGGTGG CCCATAACTA Gctacgaaga ctttcccaat 
6600
cttttgtaat cttcaaaatg tggttacttt cagctcaaac ttaactttct 
6650
tattactatt ttatgatatt tgataatcga tcaggagacc tttttttttt 
6700
ttcttaaaga aattttcgga actactagaa ttttctcttg gaattgaaaa 
6750
tatattgttt tctcagttgc cgtgttatat atttaatatc aaaagcatgc 
6800
agtagctaag ctagctaggc tttaccatac gttaatgata ctgtcttttt 
6850
ctctttacaa ttccatattc gaatttgatt tgtatataac atattgggaa 
6900
gaatcatcaa tatgtattca gctcaaaaga attcaacaaa aaaaaatgcc 
6950
tattatcaat aaaaattcac tgggctttag aaggcccaca atagtataat 
7000
ggatcctttt tgttgggctt atttcagtca gggaacaata gccttgattt 
7050
tgttgggcta accgctaacg cattaaaaaa atcacggtca atcggtgatc 
7100
gtcaaatcta gttacgtggc atttaatatt taaaactaca aaatttacca 
7150
gtcttggctc aaaaaaatat ttattcactt ttcttcttct ctgaccaaaa 
7200
tcaaaatttg ttcgattctc attcttcttc tcacagtcgt aaaccctaaa 
7250
aaaaaaacag agaaatcaaa tttcaatctc gaaggatcta caaagaagcA 
7300
TGACGACCGG AGATCTCGTT AATATCCATC CTACTGAGCT TAAATTCCCC 
7350
Tgtaagtttt ttttttccga ttgatttgat ccctctcgga ttcatttcac 
7400
cttttttacg ttttcgattc tccgaattga accgtcgttg tttgtttggg 
7450
taacctctgt tataatttgt gttgttgttg gtggtgagaa gTTGAGTTGA 
7500
AGAAACAAAG TTCGTGTTCG ATGCAATTGA CCAACAAGAC AACTACTCAA 
7550
TGTGTCGCTT TTAAGgtctt ttacattctc ttcttacaat tctgtcttat 
7600
tagtacacat tgagagagtg ttgatgttaa ttgagagaca cacagGTTAA 
7650
AACAACCAAT CCTCGCAAAT ACTGTGTTCG TCCTAACACT GGTGTTGTCT 
7700
TGCCCGGTGA TTCCTGCAAT GTTACAGgtt cttaaaacca tttcttcttt 
7750
cattcaaaag ctttggtttt ttttagtcaa caacacaaaa gatgattgtt 
7800
gttttgtttc agTGACGATG CAAGCCCAGA AAGAGGCACC ACTTGATATG 
7850
CAATGCAAAG ACAAGTTCCT TGTTCAGACT GTTGTTGTCT CTGATGGTAC 
7900
TACTTCCAAA GAAGTCCTCG CTGAAATGgt ttgcacacta tatgcttttt 
7950
taaaggaact ctcttgcttt agcttcttct tcttcttatt atgaattggt 
8000
ttctttgttg cagTTCAACA AGGAGGCTGG TAGAGTGATT GAGGATTTCA 
8050
AACTGCGAGT TGTTTACATT CCTGCTAATC CTCCTTCACC TGTCCCTGAA 
8100
GGTTCTGAAG AAGGCAACTC TCCTATGGCT TCCCTCAACG ATATTGCCTC 
8150
TCAATCTGCC TCACTCTTTG ATGACgtgag atgatgattc attttgttat 
8200
ccaatgttaa gaaaccgagt gtaatatgca tcttcttatt tcagGTGTCA 
8250
AGAACGTTTG AAGAAACAAG TGAGAAATCT TCAGAGgtaa caacatcaca 
8300
aatctttgtc ttttaccatt ctcgacatct tg
8350