Locus |
Common name |
Short description |
AT4G01060 |
CPL3, ETC3 |
ENHANCER OF TRY AND CPC 3, CAPRICE-like MYB3 (.1.2.3) |
>AT4G01060.3 CDS map
>>Show genomic map

Uncut enzymes: AatII, Acc65I, AccI, AccII(FnuDII), AccIII(BspMII), AclI, AfeI, AflII, AflIII, AgeI, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, ApoI, AscI, AseI, AvaI, AvaII, AvrII, BaeI, BalI, BanI, BanII, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BfaI, BglI, BglII, BlpI, BmrI, BpmI, BsaAI, BsaHI, BsaI, BsaWI, BsaXI, BseRI, BsgI, BsiEI, BsiHKAI, BsiWI, BslI, BsmAI, BsmBI, BsmFI, BsoBI, Bsp1286I, BspDI, BspEI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BsrFI, BsrGI, BsrI, BssHII, BssSI, BstAPI, BstBI, BstEII, BstF5I, BstUI, BstXI, BstZ17I, Bsu36I, BtgI, BtrI, BtsI, Cac8I, Cfr10I, ClaI, DraI, DraIII, DrdI, EaeI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRI, EcoRV, FauI, Fnu4HI, FokI, FseI, FspI, HaeII, HaeIII, HgaI, HhaI, HinP1I, HincII, HpaI, HpaII, HphI, Hpy99I, HpyCH4III, HpyCH4IV, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MscI, MseI, MslI, MspI, MwoI, NaeI, , NarI, NciI, NcoI, NdeI, NgoMIV, NheI, NotI, NruI, NspI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflFI, PflMI, PleI, PmeI, PmlI, PpuMI, PshAI, PsiI, PspOMI, PstI, PvuI, PvuII, RsaI, RsrII, SacI, SacII, SalI, SapI, Sau96I, SbfI, ScaI, SexAI, SfaNI, SfcI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SpeI, SphI, SspI, StuI, StyI, SwaI, TfiI, TliI, TseI, TspRI, Tth111I, XbaI, XcmI, XhoI, XmaI, XmnI
Name |
Recognition sequence |
Cut positions |
AciI
| C|CGC |
186 |
AluI
| AG|CT |
135, 163 |
BamHI
| G|GATCC |
173 |
BsaBI
| GATNN|NNATC |
8 |
BsaJI
| C|CNNGG |
177 |
BsmI
| GAATGCN| |
129 |
BspHI
| T|CATGA |
215 |
BssKI
| |CCNGG |
177 |
BstNI
| CC|[AT]GG |
177 |
BstYI
| Pu|GATCPy |
173 |
DdeI
| C|TNAG |
19 |
DpnI
| GA-CH3|TC |
172 |
DpnII
| |GATC |
172 |
HindIII
| A|AGCTT |
136 |
HinfI
| G|ANTC |
98 |
Hpy188I
| TCN|GA |
57 |
HpyCH4V
| TG|CA |
129 |
MboI
| |GATC |
172 |
MspA1I
| C[AC]G|C[GT]G |
188 |
N.BstNBI
| GAGTCNNNN|N |
103 |
NlaIII
| CATG| |
94, 214 |
NlaIV
| GGN|NCC |
173 |
NsiI
| ATGCA|T |
130 |
PspGI
| |CC[AT]GG |
177 |
Sau3AI
| |GATC |
172 |
ScrFI
| CC|NGG |
177 |
SmlI
| C|TPyPuAG |
76 |
Taqƒ¿I
| T|CGA |
124 |
Tsp45I
| |GT[CG]AC |
145 |
Tsp509I
| |AATT |
196, 221 |
Click here to view TAIR data
>AT4G01060.3 length:228
ATGGATAACC ATCGCAGGAC TAAGCAACCC AAGACCAACT CCATCGTTAC | 50 |
TTCTTCTTCT GAAGAAGTGA GTAGTCTTGA GTGGGAAGTT GTGAACATGA | 100 |
GTCAAGAAGA AGAAGATTTG GTCTCTCGAA TGCATAAGCT TGTCGGTGAC | 150 |
AGGTGGGAAC TGATAGCTGG GAGGATCCCA GGAAGAACCG CTGGAGAAAT | 200 |
TGAGAGGTTT TGGGTCATGA AAAATTGA | 250 |
>AT4G01060.3 longest ORF length:75
MDNHRRTKQP KTNSIVTSSS EEVSSLEWEV VNMSQEEEDL VSRMHKLVGD | 50 |
RWELIAGRIP GRTAGEIERF WVMKN | 100 |
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