fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

>>AT4G01060 (CPL3, ETC3)

Alias CPL3, ETC3
TF Classification
FioreDBMYB (Click to show phylogenetic tree)
RARTFMYB superfamily / CAPRICE
AtTFDB
PlnTFDBMYB-related (v3.0), MYB-related (v1.0)
DATFMYB-related
TAIR short description ENHANCER OF TRY AND CPC 3, CAPRICE-like MYB3 (.1.2.3)
TAIR annotation Encodes a Myb-related protein similar to CPC. Involved in epidermal cell differentiation. Mutants have reduced numbers of root hairs and increased trichome branching. Involved in endoreduplication. Loss of function mutants are hypertrophic and early flowering. (.1), Encodes a Myb-related protein similar to CPC. Involved in epidermal cell differentiation. Mutants have reduced numbers of root hairs and increased trichome branching. Involved in endoreduplication. Loss of function mutants are hypertrophic and early flowering. (.2), Encodes a Myb-related protein similar to CPC. Involved in epidermal cell differentiation. Mutants have reduced numbers of root hairs and increased trichome branching. Involved in endoreduplication. Loss of function mutants are hypertrophic and early flowering. (.3)
Gene model
Gene model cDNA support
AT4G01060.1 7
AT4G01060.3 4
AT4G01060.2 2
Entry clone (w/o stop) IE_01A01
External link
General info TAIR DATA
Genomic seq TAIR seq viewer
SNP SALK SNP Viewer
T-DNA tag line T-DNA Express
miRNA Search ASRP
Phylogeny SALAD database
Promoter ppdb
Microarray data
FioreDB
ATTED-II ATTED-II data
NCBI GEO NCBI GEO profile
NASC NASCarray_SpotHistory NASCarray_DigitalNorthern
Genevestigator Genevestigator
eFP Browser Developmental Map Abiotic Stress
AtGenExpress Development Hormone Abiotic Stress Light Pathogen
Gene Ontology (GO)
(P) 10026: other cellular processes ->trichome differentiation
(P) 10228: developmental processes ->vegetative to reproductive phase transition of meristem
(F) 1135: other molecular functions ->transcription factor activity, RNA polymerase II transcription factor recruiting
(F) 3677: DNA or RNA binding ->DNA binding
(F) 3700: transcription factor activity ->transcription factor activity, sequence-specific DNA binding
(F) 43565: DNA or RNA binding ->sequence-specific DNA binding
(F) 44212: DNA or RNA binding ->transcription regulatory region DNA binding
(P) 48765: developmental processes ->root hair cell differentiation
(C) 5634: nucleus ->nucleus
(P) 6351: transcription,DNA-dependent ->transcription, DNA-templated
(P) 6355: other metabolic processes ->regulation of transcription, DNA-templated
(P) 6357: other cellular processes ->regulation of transcription from RNA polymerase II promoter
(P) 9651: response to abiotic or biotic stimulus ->response to salt stress
(P) 9737: other biological processes ->response to abscisic acid
(P) 9751: other biological processes ->response to salicylic acid
(P) 9753: other biological processes ->response to jasmonic acid
(F) 981: transcription factor activity ->RNA polymerase II transcription factor activity, sequence-specific DNA binding
miRNA/tasiRNA
Orthologs
Type
Ia Ib II III Total
poplar 1 3 4
soybean 1 1
rice
sorghum
physcomitrella
Total 2 3 5
Repression motif 

       

       

        Repression motif
in putative orthologs		
        
        

       

       

        Status
        
         

          
Plasmid construction -> done

          
Plasmid construction -> done

          
Transformed -> done

          
T1 seed harvested -> done

          
T2 seed harvested -> done

         

        		
       

       

        CRES-T phenotype from individual project

View all photo        		
        glabra on rosette and cauline leaves, stem and sepal (46/46)

         glabra (direct input)


        		
       

       

        CRES-T phenotype from publication
        

        
       


       

        CRES-T phenotype from bulk project
        
         glabra 
         (A20539-166)
         

         glabra 
         (A20231-37)
         

         
         

         glabra 
         (A20538-113)
         

         glabra 
         (A20536-39)
         

         
         

         glabra 
         (A20537-63)
         

         
         

         glabra 
         (A20536-33)
         

         
         

         glabra 
         (A20243-105)
         

         
         
         

         glabra 
         (A20536-31)
         

         glabra 
         (A20243-104)
         

         
         
         

         glabra 
         (A20536-49)
         

         glabra 
         (A20537-101)
         

         
         

         glabra 
         (A20536-25)
         

         
         

         glabra 
         (A20538-116)
         

         glabra 
         (A20536-9)
         

         
         

         glabra 
         (A20536-32)
         

         
         

         glabra 
         (A20536-40)
         

         glabra 
         (A20538-111)
         

         
         

         glabra 
         (A20536-29)
         


        		
       

       

        Phenotype in ornamental plants


        
         

          

           ID
           Species
           Construct
           Date
           Comment
           Phenotype
           Photo
          

          

           ID62
           Chrysanthemum
           35S:AtCDS-SRDX
           2005-10-24
            
           no phenotype 
            
          

         

         

          Comment