fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G01460 bHLH057 basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.1)

>AT4G01460.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, StyI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 243
BglII A|GATCT 734, 893
HindIII A|AGCTT 446, 769
SacI GAGCT|C 305
XbaI T|CTAGA 507


Click here to view TAIR data

>AT4G01460.1 length:948
ATGAGTGGAT TGATGAGTTT TGGTGAATTA GAAGACCAAT TTGGTCAGAT 
50
TTCAGACACT ACTATGGAAG AGAAGATACC ATTTCTGCAA ATGCTTCAAT 
100
GCATAGAACA CCCTTTTACA ACAACAGAAC CAAATCAGTT TCTCCAATCA 
150
CTTCTCCAGA TCCAAACCCT AGAATCAAAG AGCTGTCTCA CCCTTGAAAC 
200
AAACATCAAA AGAGATCCGG GTCAAACAGA TGACCCGGAA AAGGATCCAA 
250
GAACAGAAAA CGGAGCAGTA ACGGTCAAAG AAAAAAGAAA ACGGAAACGT 
300
ACAAGAGCTC CAAAGAACAA AGACGAAGTT GAAAACCAAA GGATGACTCA 
350
CATTGCCGTC GAACGTAATC GAAGACGACA AATGAACGAA CACTTAAACT 
400
CTCTCCGATC TCTCATGCCT CCTTCGTTTC TTCAACGGGG TGACCAAGCT 
450
TCGATTGTAG GAGGGGCAAT AGATTTCATC AAGGAACTAG AGCAACTCTT 
500
GCAATCTCTA GAAGCTGAGA AACGAAAGGA TGGAACTGAT GAAACTCCTA 
550
AAACGGCGTC GTGTTCTTCA TCTTCGTCTC TTGCATGCAC TAACTCTTCT 
600
ATTTCTAGCG TGTCTACGAC GTCGGAAAAT GGATTTACGG CGAGATTCGG 
650
CGGTGGAGAT ACGACAGAAG TGGAGGCTAC GGTGATACAG AACCATGTGA 
700
GCTTAAAAGT TCGGTGTAAG AGAGGAAAAC GACAGATCTT AAAAGCTATT 
750
GTCTCGATTG AAGAACTAAA GCTTGCGATT CTACATCTCA CTATCTCTTC 
800
TTCCTTTGAC TTTGTCATCT ACTCTTTCAA TCTCAAGATG GAAGATGGTT 
850
GTAAATTAGG ATCAGCAGAT GAGATAGCGA CAGCCGTTCA TCAGATCTTC 
900
GAGCAAATCA ACGGTGAAGT CATGTGGTCA AATCTTAGTC GAACTTAG
950

>AT4G01460.1 longest ORF length:315
MSGLMSFGEL EDQFGQISDT TMEEKIPFLQ MLQCIEHPFT TTEPNQFLQS 
50
LLQIQTLESK SCLTLETNIK RDPGQTDDPE KDPRTENGAV TVKEKRKRKR 
100
TRAPKNKDEV ENQRMTHIAV ERNRRRQMNE HLNSLRSLMP PSFLQRGDQA 
150
SIVGGAIDFI KELEQLLQSL EAEKRKDGTD ETPKTASCSS SSSLACTNSS 
200
ISSVSTTSEN GFTARFGGGD TTEVEATVIQ NHVSLKVRCK RGKRQILKAI 
250
VSIEELKLAI LHLTISSSFD FVIYSFNLKM EDGCKLGSAD EIATAVHQIF 
300
EQINGEVMWS NLSRT
350