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| Locus | Common name | Short description |
| AT4G09960 | AGL11, STK | SEEDSTICK, AGAMOUS-like 11, K-box region and MADS-box transcription factor family protein (.1.2.3.4) |
>AT4G09960.3 CDS map
>>Show genomic map
Uncut enzymes: AatII, Acc65I, AccI, AccIII(BspMII), AclI, AfeI, AflIII, AgeI, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AvaI, AvrII, BaeI, BalI, BamHI, BanI, BanII, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BglI, BglII, BmrI, BpmI, BsaAI, BsaBI, BsaHI, BsaI, BsaJI, BsaWI, BsaXI, BseRI, BsgI, BsiEI, BsiHKAI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BsoBI, Bsp1286I, BspDI, BspEI, BspHI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BsrFI, BsrGI, BsrI, BssHII, BssKI, BstBI, BstNI, BstXI, BstZ17I, Bsu36I, BtgI, BtrI, BtsI, Cac8I, Cfr10I, ClaI, DraI, DraIII, DrdI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HaeII, HgaI, HincII, HpaI, HpaII, HphI, Hpy99I, I-CeuI, I-SceI, KasI, KpnI, MboII, MluI, MlyI, MnlI, MscI, MslI, MspA1I, MspI, N.BstNBI, NaeI, , NarI, NciI, NcoI, NdeI, NgoMIV, NheI, NlaIV, NotI, NruI, NsiI, NspI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflFI, PflMI, PleI, PmeI, PmlI, PpuMI, PshAI, PsiI, PspGI, PspOMI, PstI, PvuI, PvuII, RsrII, SacI, SacII, SalI, SapI, SbfI, ScaI, ScrFI, SexAI, SfaNI, SfcI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SpeI, SphI, SspI, StuI, StyI, SwaI, TliI, TseI, Tth111I, XbaI, XcmI, XhoI, XmaI, XmnI
| Name | Recognition sequence | Cut positions |
| AccII(FnuDII) | CG|CG | 337, 532 |
| AciI | C|CGC | 336 |
| AflII | C|TTAAG | 432 |
| AluI | AG|CT | 177, 289, 363, 475, 552, 658 |
| ApoI | Pu|AATTPy | 752 |
| AseI | AT|TAAT | 646 |
| AvaII | G|G[AT]CC | 185, 493 |
| BfaI | C|TAG | 312, 483 |
| BlpI | GC|TNAGC | 362 |
| BslI | CCNNNNN|NNGG | 277 |
| BssSI | C|TCGTG | 227 |
| BstAPI | GCANNNN|NTGC | 204, 509 |
| BstEII | G|GTNACC | 58 |
| BstF5I | GGATGNN| | 78 |
| BstUI | CG|CG | 337, 532 |
| BstYI | Pu|GATCPy | 377, 712 |
| DdeI | C|TNAG | 361, 366, 576, 583 |
| DpnI | GA-CH3|TC | 36, 264, 376, 487, 711, 737 |
| DpnII | |GATC | 36, 264, 376, 487, 711, 737 |
| EaeI | Py|GGCCPu | 231 |
| Fnu4HI | GC|NGC | 336 |
| HaeIII | GG|CC | 230 |
| HhaI | GCG|C | 206, 533 |
| HinP1I | G|CGC | 206, 533 |
| HindIII | A|AGCTT | 290, 659 |
| HinfI | G|ANTC | 354, 386, 404, 417, 461 |
| Hpy188I | TCN|GA | 161, 297, 407, 639, 735, 763 |
| HpyCH4III | ACN|GT | 318 |
| HpyCH4IV | A|CGT | 134 |
| HpyCH4V | TG|CA | 140, 196, 649 |
| MboI | |GATC | 36, 264, 376, 487, 711, 737 |
| MfeI | C|AATTG | 653 |
| MseI | T|TAA | 65, 431, 645 |
| MwoI | GCNNNNN|NNGC | 204, 509, 657 |
| NlaIII | CATG| | 11, 503 |
| RsaI | GT|AC | 280, 340 |
| Sau3AI | |GATC | 36, 264, 376, 487, 711, 737 |
| Sau96I | G|GNCC | 185, 493 |
| SmlI | C|TPyPuAG | 432, 469 |
| Taqƒ¿I | T|CGA | 124, 525 |
| TfiI | G|A[AT]TC | 354, 386, 404, 461 |
| Tsp45I | |GT[CG]AC | 57, 132 |
| Tsp509I | |AATT | 70, 652, 674, 751 |
| TspRI | NNCA[CG]TGNN| | 319 |
Click here to view TAIR data
>AT4G09960.3 length:771
ATGCTCTTTC CCCATGAAAG AAAGAAAGAG AAAGAAAGAT CACAAGGGTT | 50 |
TTATTTGGTC ACCAGATTAA GAATTAGGAT GGGAAGAGGA AAGATAGAAA | 100 |
TAAAGAGGAT AGAGAACTCA ACAAATCGAC AAGTGACGTT TTGCAAAAGA | 150 |
AGAAATGGAC TTCTGAAGAA AGCCTATGAG CTTTCGGTCC TTTGCGATGC | 200 |
AGAAGTTGCG CTCATTGTTT TCTCCACTCG TGGCCGTCTC TATGAATACG | 250 |
CCAATAACAA CATAAGATCA ACCATTGAGA GGTACAAGAA AGCTTGTTCT | 300 |
GATAGCACCA ACACTAGCAC TGTCCAAGAA ATCAATGCCG CGTACTATCA | 350 |
ACAAGAATCT GCTAAGCTGA GACAACAGAT CCAAACGATT CAAAACTCCA | 400 |
ACAGGAATCT GATGGGAGAC TCTTTGAGTT CCTTAAGTGT CAAGGAACTA | 450 |
AAACAAGTTG AGAATCGCCT TGAGAAAGCT ATCTCTAGGA TCAGGTCCAA | 500 |
GAAGCATGAG TTGCTTTTAG TTGAAATCGA AAACGCGCAG AAAAGGGAGA | 550 |
TTGAGCTTGA CAATGAGAAC ATCTATCTAA GAACTAAGGT AGCAGAAGTG | 600 |
GAGAGGTATC AACAACACCA TCATCAAATG GTTAGTGGTT CAGAGATTAA | 650 |
TGCAATTGAA GCTTTAGCCT CACGCAATTA CTTTGCTCAT AGCATTATGA | 700 |
CTGCTGGTTC TGGATCTGGT AATGGAGGTT CTTACTCTGA TCCCGACAAG | 750 |
AAAATTCTTC ATCTCGGATA A | 800 |
>AT4G09960.3 longest ORF length:256
MLFPHERKKE KERSQGFYLV TRLRIRMGRG KIEIKRIENS TNRQVTFCKR | 50 |
RNGLLKKAYE LSVLCDAEVA LIVFSTRGRL YEYANNNIRS TIERYKKACS | 100 |
DSTNTSTVQE INAAYYQQES AKLRQQIQTI QNSNRNLMGD SLSSLSVKEL | 150 |
KQVENRLEKA ISRIRSKKHE LLLVEIENAQ KREIELDNEN IYLRTKVAEV | 200 |
ERYQQHHHQM VSGSEINAIE ALASRNYFAH SIMTAGSGSG NGGSYSDPDK | 250 |
KILHLG | 300 |