Locus |
Common name |
Short description |
AT4G34610 |
BLH6 |
BEL1-like homeodomain 6 (.1.2) |
>AT4G34610.1 CDS map
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Uncut enzymes: AatII, Acc65I, AclI, AfeI, AflIII, AhdI, AlwI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AseI, AvrII, BaeI, BalI, BamHI, BbsI, BbvCI, BbvI, BcgI, BciVI, BglI, BglII, BmrI, BpmI, BsaI, BsaXI, BseRI, BsgI, BsiEI, BsiWI, BsmAI, BsmBI, BsmFI, BspDI, BspHI, BspMI, BsrBI, BsrGI, BssHII, BstAPI, BstBI, BstEII, BstYI, BstZ17I, BtrI, BtsI, ClaI, DraI, DraIII, DrdI, EaeI, EagI, EarI, EciI, EcoNI, FauI, FokI, FseI, FspI, HaeIII, HgaI, HpaI, HphI, Hpy99I, I-CeuI, I-SceI, KpnI, MboII, MluI, MlyI, MnlI, MscI, N.BstNBI, , NotI, NruI, NsiI, NspI, PI-PspI, PI-SceI(VDE), PacI, PciI, PflFI, PflMI, PleI, PmeI, PmlI, PshAI, PspOMI, PstI, PvuI, PvuII, RsrII, SalI, SapI, SbfI, ScaI, SexAI, SfaNI, SfiI, SgrAI, SpeI, SphI, StuI, SwaI, TspRI, Tth111I, XcmI
Name |
Recognition sequence |
Cut positions |
AccI
| GT|[AC][TG]AC |
959 |
AccII(FnuDII)
| CG|CG |
241, 953, 1070 |
AccIII(BspMII)
| T|CCGGA |
802 |
AciI
| C|CGC |
1069 |
AflII
| C|TTAAG |
439, 886 |
AgeI
| A|CCGGT |
274 |
AluI
| AG|CT |
103, 231, 453, 484, 715, 730, 937, 1237, 1591 |
AlwNI
| CAGNNN|CTG |
283 |
ApoI
| Pu|AATTPy |
320, 1150, 1563 |
AvaI
| C|PyCGPuG |
561, 1241, 1512 |
AvaII
| G|G[AT]CC |
1209, 1271, 1310 |
BanI
| G|GPyPuCC |
253, 348 |
BanII
| GPuGCPy|C |
1238 |
BclI
| T|GATCA |
897 |
BfaI
| C|TAG |
458, 1046, 1412, 1458 |
BlpI
| GC|TNAGC |
734 |
BsaAI
| PyAC|GTPu |
821 |
BsaBI
| GATNN|NNATC |
1232 |
BsaHI
| GPu|CGPyC |
348 |
BsaJI
| C|CNNGG |
257, 297, 831, 1071, 1275, 1314, 1484, 1512, 1539 |
BsaWI
| [AT]|CCGG[AT] |
274, 802, 1269, 1556 |
BsiHKAI
| G[AT]GC[AT]|C |
549, 564, 1238 |
BslI
| CCNNNNN|NNGG |
151, 954, 1076, 1275, 1343 |
BsmI
| GAATGCN| |
52, 1504 |
BsoBI
| C|PyCGPuG |
561, 1241, 1512 |
Bsp1286I
| G[GAT]GC[CAT]|C |
549, 564, 1238 |
BspEI
| T|CCGGA |
802 |
BspT107I(HgiCI)
| G|G[TC][AG]CC |
253, 348 |
BsrDI
| GCAATGNN| |
361 |
BsrFI
| Pu|CCGGPy |
82, 274, 881, 1337 |
BsrI
| ACTGGN| |
1088 |
BssKI
| |CCNGG |
30, 315, 384, 1483, 1511, 1539 |
BssSI
| C|TCGTG |
814, 1301 |
BstF5I
| GGATGNN| |
406, 646, 793, 1330 |
BstNI
| CC|[AT]GG |
315 |
BstUI
| CG|CG |
241, 953, 1070 |
BstXI
| CCANNNNN|NTGG |
1281 |
Bsu36I
| CC|TNAGG |
787 |
BtgI
| C|CPuPyGG |
257, 1071, 1275 |
Cac8I
| GCN|NGC |
135, 881, 1047 |
Cfr10I
| [AG]|CCGG[TC] |
82, 274, 881, 1337 |
DdeI
| C|TNAG |
70, 116, 291, 589, 733, 786, 1201 |
DpnI
| GA-CH3|TC |
43, 203, 849, 896, 1039, 1232 |
DpnII
| |GATC |
43, 203, 849, 896, 1039, 1232 |
EcoO109I
| PuG|GNCCPy |
1210 |
EcoRI
| G|AATTC |
320, 1150 |
EcoRV
| GAT|ATC |
798 |
Fnu4HI
| GC|NGC |
444, 729, 1069, 1218 |
HaeII
| PuGCGC|Py |
348 |
HhaI
| GCG|C |
240, 347 |
HinP1I
| G|CGC |
240, 347 |
HincII
| GTPy|PuAC |
621 |
HindIII
| A|AGCTT |
938 |
HinfI
| G|ANTC |
36, 75, 263, 308, 392, 542, 558, 569, 980, 1029, 1164, 1409 |
HpaII
| C|CGG |
30, 81, 273, 383, 801, 880, 1268, 1336, 1482, 1511, 1539, 1555 |
Hpy188I
| TCN|GA |
69, 269, 326, 395, 545, 594, 852, 1032, 1179, 1200 |
HpyCH4III
| ACN|GT |
20, 223, 284 |
HpyCH4IV
| A|CGT |
820, 891, 1376 |
HpyCH4V
| TG|CA |
168, 367, 609, 684, 927, 1099 |
KasI
| G|GCGCC |
348 |
MboI
| |GATC |
43, 203, 849, 896, 1039, 1232 |
MfeI
| C|AATTG |
1573 |
MseI
| T|TAA |
438, 471, 885, 905 |
MslI
| CAPyNN|NNPuTG |
1280, 1328 |
MspA1I
| C[AC]G|C[GT]G |
1071 |
MspI
| C|CGG |
30, 81, 273, 383, 801, 880, 1268, 1336, 1482, 1511, 1539, 1555 |
MwoI
| GCNNNNN|NNGC |
1001, 1069 |
NaeI
| GCC|GGC |
881 |
NarI
| GG|CGCC |
348 |
NciI
| CC|[CG]GG |
30, 384, 1483, 1511, 1539 |
NcoI
| C|CATGG |
1275 |
NdeI
| CA|TATG |
1324 |
NgoMIV
| G|CCGGC |
881 |
NheI
| G|CTAGC |
1047 |
NlaIII
| CATG| |
1042, 1274, 1280, 1306, 1342, 1364, 1580 |
NlaIV
| GGN|NCC |
253, 348 |
PaeR7I
| C|TCGAG |
561, 1241 |
PpuMI
| PuG|G[AT]CCPy |
1210 |
PsiI
| TTA|TAA |
875 |
PspGI
| |CC[AT]GG |
315 |
RsaI
| GT|AC |
889, 1577 |
SacI
| GAGCT|C |
1238 |
SacII
| CCGC|GG |
1071 |
Sau3AI
| |GATC |
43, 203, 849, 896, 1039, 1232 |
Sau96I
| G|GNCC |
1209, 1271, 1310 |
ScrFI
| CC|NGG |
30, 315, 384, 1483, 1511, 1539 |
SfcI
| C|TPuPyAG |
56 |
SfoI
| GGC|GCC |
348 |
SmaI
| CCC|GGG |
1512 |
SmlI
| C|TPyPuAG |
439, 533, 554, 561, 886, 935, 1065, 1241, 1430 |
SnaBI
| TAC|GTA |
821 |
SspI
| AAT|ATT |
671 |
StyI
| C|C[AT][AT]GG |
297, 831, 1275, 1314 |
Taqƒ¿I
| T|CGA |
560, 705, 1234, 1240 |
TfiI
| G|A[AT]TC |
36, 75, 263, 308, 392, 542, 569, 980, 1029, 1164 |
TliI
| C|TCGAG |
561, 1241 |
TseI
| G|C[AT]GC |
729, 1218 |
Tsp45I
| |GT[CG]AC |
214 |
Tsp509I
| |AATT |
5, 319, 418, 763, 1149, 1562, 1572 |
XbaI
| T|CTAGA |
459 |
XhoI
| C|TCGAG |
561, 1241 |
XmaI
| C|CCGGG |
1512 |
XmnI
| GAANN|NNTTC |
226 |
Click here to view TAIR data
>AT4G34610.1 length:1599
ATGGAGAATT ATCCAGAAAC ACAGTTTATT CCCGGAGATT CAATGATCCA | 50 |
GAATGCTATA GTTTCTTACT CTGAGGAATC AGCCGGTAGA GAAAGAAGAA | 100 |
CTGAAGCTAA CAATGTCTCA GCCTCACAAG AGAGGCAAGC ATTGTCCAGA | 150 |
TTTGGGGGAG TTCCACAAAT GCAGAACATT GGTCAAGATT TCGGTTCTTG | 200 |
GAGAGATCAA GCGAGTGACA GGAACGGTTT CCAGCTAATG AGCGCGATGG | 250 |
CAGGTGCCAC GGGGATTCTT CAGACCGGTC AGGGACTGTC CCTTAGCCTT | 300 |
GGTTCACAGA TTCTTCCAGG AATTCATCAG ATAAGCCATC AAAATATGGC | 350 |
GCCGAGAGGC AATGAGTATG CAACACAGAG TTTTCCGGGC GGGAATCAGA | 400 |
ACTTGGATGT TGTGAGAACA ATTCCCAACT CAAAGTATCT TAAGGCGGCT | 450 |
CAACAGCTTC TAGATGAGGC TGTTAATGTA AAGAAAGCTC TAAAGCAGTT | 500 |
TCAGGCAGAG GGAGATAAAA ACAATGAGAA CCCTCAAGAA CCGAATCAGA | 550 |
GCACTCAAGA CTCGAGCACG AATCCTCCTG CGGACATCTC TCAGTCGGAG | 600 |
AGACAAGAAA TGCAGAGCAA GTTGACAAAA CTCTTGTCAA TGTTGGATGA | 650 |
GGTGGATAGA AGATATAAGC AATATTACCA GCAGATGCAG ATAGTTGTAT | 700 |
CCTCGTTCGA TGTGATAGCT GGTTATGGAG CAGCTAAGCC ATACACAGCA | 750 |
CTCGCCCTTC AAACAATTTC TCGCCATTTT CGTAGCCTAA GGGATGCGAT | 800 |
ATCCGGACAA ATCCTCGTGC TACGTAAATG CCTTGGGGAA CAACAAGATG | 850 |
GATCAGATGG GAAAAGAGTT GGGATTATAA GCCGGCTTAA GTACGTTGAT | 900 |
CAACATTTAA GACAACAAAG AGGTTTTATG CAACCTCAAG CTTGGAGACC | 950 |
TCAACGCGGT CTACCTGAAA ACTCTGTTTT GATTCTCCGT GCTTGGCTCT | 1000 |
TTGAGCATTT TCTTCACCCT TACCCAAAGG ATTCTGATAA GATCATGCTA | 1050 |
GCAAGACAAA CGGGCTTGAG CCGCGGTCAG GTTTCAAACT GGTTCATAAA | 1100 |
TGCACGAGTG CGTTTATGGA AGCCAATGGT GGAGGAGATA TACAAGGAGG | 1150 |
AATTCACAGA GAATGATTCC AACTCGTCTT CCGAAAATAC ACCGAAAATG | 1200 |
TCTGAGATAG GACCTGTTGC TGCTGATGAT GAAGATCGAG CTCGAGAGTT | 1250 |
TTCACAAGAC CAGACCAAAC CGGACCATGG ACATGGATAT GGCGAGGAAA | 1300 |
CTCGTGGCAT GGTCCAAGGC AGTCATATGG ATGGTCGCCG GTTCATGGCA | 1350 |
GTTGAGCCTA CATATCATGT GGCTGATACG TCAAGATTGG GTCGTGGTGA | 1400 |
TGTGTCCTTG ACTCTAGGGC TTCAAAACTC TCAAGGACAG GACAATGTTG | 1450 |
TGGCTATGTC TAGTGAGGCA TACAACAACT TTTCCGGGGT GGATATTTAC | 1500 |
GAGAATGCCA TCCCGGGAGA TGAAATGGAG TATGTAAACC CCGGAAGTCG | 1550 |
CCAGAACCGG ATAAATTCTT CACAATTGGT ACATGATTTT GTAGCTTGA | 1600 |
>AT4G34610.1 longest ORF length:232
MARGKIQIKR IENQTNRQVT YSKRRNGLFK KAHELTVLCD ARVSIIMFSS | 50 |
SNKLHEYISP NTTTKEIVDL YQTISDVDVW ATQYERMQET KRKLLETNRN | 100 |
LRTQIKQRLG ECLDELDIQE LRRLEDEMEN TFKLVRERKF KSLGNQIETT | 150 |
KKKNKSQQDI QKNLIHELEL RAEDPHYGLV DNGGDYDSVL GYQIEGSRAY | 200 |
ALRFHQNHHH YYPNHGLHAP SASDIITFHL LE | 250 |
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