fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G34610 BLH6 BEL1-like homeodomain 6 (.1.2)

>AT4G34610.2 CDS map

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Uncut enzymes: AatII, Acc65I, AclI, AfeI, AflIII, AhdI, AlwI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AseI, AvrII, BaeI, BalI, BamHI, BbsI, BbvCI, BbvI, BcgI, BciVI, BglI, BglII, BmrI, BpmI, BsaI, BsaXI, BseRI, BsgI, BsiEI, BsiWI, BsmAI, BsmBI, BsmFI, BspDI, BspHI, BspMI, BsrBI, BsrGI, BssHII, BstAPI, BstBI, BstEII, BstYI, BstZ17I, BtrI, BtsI, ClaI, DraI, DraIII, DrdI, EaeI, EagI, EarI, EciI, EcoNI, FauI, FokI, FseI, FspI, HaeIII, HgaI, HpaI, HphI, Hpy99I, I-CeuI, I-SceI, KpnI, MboII, MluI, MlyI, MnlI, MscI, N.BstNBI, , NotI, NruI, NsiI, NspI, PI-PspI, PI-SceI(VDE), PacI, PciI, PflFI, PflMI, PleI, PmeI, PmlI, PshAI, PspOMI, PstI, PvuI, PvuII, RsrII, SalI, SapI, SbfI, ScaI, SexAI, SfaNI, SfiI, SgrAI, SpeI, SphI, StuI, SwaI, TspRI, Tth111I, XcmI
Name Recognition sequence Cut positions
AccI GT|[AC][TG]AC 959
AccII(FnuDII) CG|CG 241, 953, 1070
AccIII(BspMII) T|CCGGA 802
AciI C|CGC 1069
AflII C|TTAAG 439, 886
AgeI A|CCGGT 274
AluI AG|CT 103, 231, 453, 484, 715, 730, 937, 1237, 1591
AlwNI CAGNNN|CTG 283
ApoI Pu|AATTPy 320, 1150, 1563
AvaI C|PyCGPuG 561, 1241, 1512
AvaII G|G[AT]CC 1209, 1271, 1310
BanI G|GPyPuCC 253, 348
BanII GPuGCPy|C 1238
BclI T|GATCA 897
BfaI C|TAG 458, 1046, 1412, 1458
BlpI GC|TNAGC 734
BsaAI PyAC|GTPu 821
BsaBI GATNN|NNATC 1232
BsaHI GPu|CGPyC 348
BsaJI C|CNNGG 257, 297, 831, 1071, 1275, 1314, 1484, 1512, 1539
BsaWI [AT]|CCGG[AT] 274, 802, 1269, 1556
BsiHKAI G[AT]GC[AT]|C 549, 564, 1238
BslI CCNNNNN|NNGG 151, 954, 1076, 1275, 1343
BsmI GAATGCN| 52, 1504
BsoBI C|PyCGPuG 561, 1241, 1512
Bsp1286I G[GAT]GC[CAT]|C 549, 564, 1238
BspEI T|CCGGA 802
BspT107I(HgiCI) G|G[TC][AG]CC 253, 348
BsrDI GCAATGNN| 361
BsrFI Pu|CCGGPy 82, 274, 881, 1337
BsrI ACTGGN| 1088
BssKI |CCNGG 30, 315, 384, 1483, 1511, 1539
BssSI C|TCGTG 814, 1301
BstF5I GGATGNN| 406, 646, 793, 1330
BstNI CC|[AT]GG 315
BstUI CG|CG 241, 953, 1070
BstXI CCANNNNN|NTGG 1281
Bsu36I CC|TNAGG 787
BtgI C|CPuPyGG 257, 1071, 1275
Cac8I GCN|NGC 135, 881, 1047
Cfr10I [AG]|CCGG[TC] 82, 274, 881, 1337
DdeI C|TNAG 70, 116, 291, 589, 733, 786, 1201
DpnI GA-CH3|TC 43, 203, 849, 896, 1039, 1232
DpnII |GATC 43, 203, 849, 896, 1039, 1232
EcoO109I PuG|GNCCPy 1210
EcoRI G|AATTC 320, 1150
EcoRV GAT|ATC 798
Fnu4HI GC|NGC 444, 729, 1069, 1218
HaeII PuGCGC|Py 348
HhaI GCG|C 240, 347
HinP1I G|CGC 240, 347
HincII GTPy|PuAC 621
HindIII A|AGCTT 938
HinfI G|ANTC 36, 75, 263, 308, 392, 542, 558, 569, 980, 1029, 1164, 1409
HpaII C|CGG 30, 81, 273, 383, 801, 880, 1268, 1336, 1482, 1511, 1539, 1555
Hpy188I TCN|GA 69, 269, 326, 395, 545, 594, 852, 1032, 1179, 1200
HpyCH4III ACN|GT 20, 223, 284
HpyCH4IV A|CGT 820, 891, 1376
HpyCH4V TG|CA 168, 367, 609, 684, 927, 1099
KasI G|GCGCC 348
MboI |GATC 43, 203, 849, 896, 1039, 1232
MfeI C|AATTG 1573
MseI T|TAA 438, 471, 885, 905
MslI CAPyNN|NNPuTG 1280, 1328
MspA1I C[AC]G|C[GT]G 1071
MspI C|CGG 30, 81, 273, 383, 801, 880, 1268, 1336, 1482, 1511, 1539, 1555
MwoI GCNNNNN|NNGC 1001, 1069
NaeI GCC|GGC 881
NarI GG|CGCC 348
NciI CC|[CG]GG 30, 384, 1483, 1511, 1539
NcoI C|CATGG 1275
NdeI CA|TATG 1324
NgoMIV G|CCGGC 881
NheI G|CTAGC 1047
NlaIII CATG| 1042, 1274, 1280, 1306, 1342, 1364, 1580
NlaIV GGN|NCC 253, 348
PaeR7I C|TCGAG 561, 1241
PpuMI PuG|G[AT]CCPy 1210
PsiI TTA|TAA 875
PspGI |CC[AT]GG 315
RsaI GT|AC 889, 1577
SacI GAGCT|C 1238
SacII CCGC|GG 1071
Sau3AI |GATC 43, 203, 849, 896, 1039, 1232
Sau96I G|GNCC 1209, 1271, 1310
ScrFI CC|NGG 30, 315, 384, 1483, 1511, 1539
SfcI C|TPuPyAG 56
SfoI GGC|GCC 348
SmaI CCC|GGG 1512
SmlI C|TPyPuAG 439, 533, 554, 561, 886, 935, 1065, 1241, 1430
SnaBI TAC|GTA 821
SspI AAT|ATT 671
StyI C|C[AT][AT]GG 297, 831, 1275, 1314
Taqƒ¿I T|CGA 560, 705, 1234, 1240
TfiI G|A[AT]TC 36, 75, 263, 308, 392, 542, 569, 980, 1029, 1164
TliI C|TCGAG 561, 1241
TseI G|C[AT]GC 729, 1218
Tsp45I |GT[CG]AC 214
Tsp509I |AATT 5, 319, 418, 763, 1149, 1562, 1572
XbaI T|CTAGA 459
XhoI C|TCGAG 561, 1241
XmaI C|CCGGG 1512
XmnI GAANN|NNTTC 226


Click here to view TAIR data

>AT4G34610.2 length:1599
ATGGAGAATT ATCCAGAAAC ACAGTTTATT CCCGGAGATT CAATGATCCA 
50
GAATGCTATA GTTTCTTACT CTGAGGAATC AGCCGGTAGA GAAAGAAGAA 
100
CTGAAGCTAA CAATGTCTCA GCCTCACAAG AGAGGCAAGC ATTGTCCAGA 
150
TTTGGGGGAG TTCCACAAAT GCAGAACATT GGTCAAGATT TCGGTTCTTG 
200
GAGAGATCAA GCGAGTGACA GGAACGGTTT CCAGCTAATG AGCGCGATGG 
250
CAGGTGCCAC GGGGATTCTT CAGACCGGTC AGGGACTGTC CCTTAGCCTT 
300
GGTTCACAGA TTCTTCCAGG AATTCATCAG ATAAGCCATC AAAATATGGC 
350
GCCGAGAGGC AATGAGTATG CAACACAGAG TTTTCCGGGC GGGAATCAGA 
400
ACTTGGATGT TGTGAGAACA ATTCCCAACT CAAAGTATCT TAAGGCGGCT 
450
CAACAGCTTC TAGATGAGGC TGTTAATGTA AAGAAAGCTC TAAAGCAGTT 
500
TCAGGCAGAG GGAGATAAAA ACAATGAGAA CCCTCAAGAA CCGAATCAGA 
550
GCACTCAAGA CTCGAGCACG AATCCTCCTG CGGACATCTC TCAGTCGGAG 
600
AGACAAGAAA TGCAGAGCAA GTTGACAAAA CTCTTGTCAA TGTTGGATGA 
650
GGTGGATAGA AGATATAAGC AATATTACCA GCAGATGCAG ATAGTTGTAT 
700
CCTCGTTCGA TGTGATAGCT GGTTATGGAG CAGCTAAGCC ATACACAGCA 
750
CTCGCCCTTC AAACAATTTC TCGCCATTTT CGTAGCCTAA GGGATGCGAT 
800
ATCCGGACAA ATCCTCGTGC TACGTAAATG CCTTGGGGAA CAACAAGATG 
850
GATCAGATGG GAAAAGAGTT GGGATTATAA GCCGGCTTAA GTACGTTGAT 
900
CAACATTTAA GACAACAAAG AGGTTTTATG CAACCTCAAG CTTGGAGACC 
950
TCAACGCGGT CTACCTGAAA ACTCTGTTTT GATTCTCCGT GCTTGGCTCT 
1000
TTGAGCATTT TCTTCACCCT TACCCAAAGG ATTCTGATAA GATCATGCTA 
1050
GCAAGACAAA CGGGCTTGAG CCGCGGTCAG GTTTCAAACT GGTTCATAAA 
1100
TGCACGAGTG CGTTTATGGA AGCCAATGGT GGAGGAGATA TACAAGGAGG 
1150
AATTCACAGA GAATGATTCC AACTCGTCTT CCGAAAATAC ACCGAAAATG 
1200
TCTGAGATAG GACCTGTTGC TGCTGATGAT GAAGATCGAG CTCGAGAGTT 
1250
TTCACAAGAC CAGACCAAAC CGGACCATGG ACATGGATAT GGCGAGGAAA 
1300
CTCGTGGCAT GGTCCAAGGC AGTCATATGG ATGGTCGCCG GTTCATGGCA 
1350
GTTGAGCCTA CATATCATGT GGCTGATACG TCAAGATTGG GTCGTGGTGA 
1400
TGTGTCCTTG ACTCTAGGGC TTCAAAACTC TCAAGGACAG GACAATGTTG 
1450
TGGCTATGTC TAGTGAGGCA TACAACAACT TTTCCGGGGT GGATATTTAC 
1500
GAGAATGCCA TCCCGGGAGA TGAAATGGAG TATGTAAACC CCGGAAGTCG 
1550
CCAGAACCGG ATAAATTCTT CACAATTGGT ACATGATTTT GTAGCTTGA
1600

>AT4G34610.2 longest ORF length:532
MENYPETQFI PGDSMIQNAI VSYSEESAGR ERRTEANNVS ASQERQALSR 
50
FGGVPQMQNI GQDFGSWRDQ ASDRNGFQLM SAMAGATGIL QTGQGLSLSL 
100
GSQILPGIHQ ISHQNMAPRG NEYATQSFPG GNQNLDVVRT IPNSKYLKAA 
150
QQLLDEAVNV KKALKQFQAE GDKNNENPQE PNQSTQDSST NPPADISQSE 
200
RQEMQSKLTK LLSMLDEVDR RYKQYYQQMQ IVVSSFDVIA GYGAAKPYTA 
250
LALQTISRHF RSLRDAISGQ ILVLRKCLGE QQDGSDGKRV GIISRLKYVD 
300
QHLRQQRGFM QPQAWRPQRG LPENSVLILR AWLFEHFLHP YPKDSDKIML 
350
ARQTGLSRGQ VSNWFINARV RLWKPMVEEI YKEEFTENDS NSSSENTPKM 
400
SEIGPVAADD EDRAREFSQD QTKPDHGHGY GEETRGMVQG SHMDGRRFMA 
450
VEPTYHVADT SRLGRGDVSL TLGLQNSQGQ DNVVAMSSEA YNNFSGVDIY 
500
ENAIPGDEME YVNPGSRQNR INSSQLVHDF VA
550