fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G36900 DEAR4, RAP2.10 DREB AND EAR MOTIF PROTEIN 4, related to AP2 10 (.1)

>AT4G36900.1 genomic map

>>Show CDS map




Uncut enzymes: AatII, Acc65I, AclI, AflII, AgeI, AhdI, AlwI, AlwNI, ApaI, AscI, BaeI, BamHI, BanI, BanII, BbsI, BbvCI, BbvI, BcgI, BciVI, BglI, BlpI, BmrI, BpmI, BsaHI, BsaI, BsaXI, BseRI, BsgI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BsrI, BssHII, BssSI, BstAPI, BstEII, BstXI, BtsI, DraIII, EagI, EarI, EciI, EcoRI, FauI, FokI, FseI, FspI, HgaI, HphI, I-CeuI, I-SceI, KasI, KpnI, MboII, MlyI, MnlI, , NarI, NcoI, NheI, NotI, NruI, PI-PspI, PI-SceI(VDE), PacI, PflFI, PflMI, PleI, PmeI, PspOMI, PstI, RsrII, SacI, SacII, SalI, SapI, SbfI, SfaNI, SfiI, SfoI, SgrAI, SmaI, SphI, StuI, Tth111I, XmaI
Name Recognition sequence Cut positions
AccI GT|[AC][TG]AC 1721, 1982
AccII(FnuDII) CG|CG 2787, 4395, 4919, 6109, 6236
AccIII(BspMII) T|CCGGA 4185, 4767
AciI C|CGC 2799, 4089
AfeI AGC|GCT 6222
AflIII A|CPuPyGT 1525, 1725, 1894, 2788, 3386, 3509, 4069, 5443
AluI AG|CT 434, 501, 630, 927, 1247, 1297, 1503, 2449, 2739, 3236, 3669, 4458, 5292, 5466, 5600, 5977, 6456
Aor51HI(Eco47III) AGC|GCT 6222
ApaLI G|TGCAC 6012
ApoI Pu|AATTPy 199, 387, 394, 524, 588, 1136, 1629, 1759, 1772, 1861, 1874, 2358, 2535, 2604, 2663, 2939, 3142, 3205, 3218, 3694, 4009, 5480, 5497, 5526, 5710, 6475
AseI AT|TAAT 1744, 2126, 2852, 3602, 3750, 4675, 5652
AvaI C|PyCGPuG 214
AvaII G|G[AT]CC 328, 553, 1028, 1429, 4431
AvrII C|CTAGG 3330
BalI TGG|CCA 4220
BclI T|GATCA 5396, 6145
BfaI C|TAG 481, 507, 632, 1851, 3208, 3234, 3246, 3329, 4984, 5520, 5724, 6031, 6435
BglII A|GATCT 5532
BsaAI PyAC|GTPu 1403, 1435, 1526, 1939, 4068, 4648
BsaBI GATNN|NNATC 3434
BsaJI C|CNNGG 3330, 4223, 4428
BsaWI [AT]|CCGG[AT] 4185, 4767
BsiEI CGPuPy|CG 682, 1384, 5278
BsiHKAI G[AT]GC[AT]|C 4562, 6012
BslI CCNNNNN|NNGG 3405, 3768, 4290, 5842
BsoBI C|PyCGPuG 214
Bsp1286I G[GAT]GC[CAT]|C 4562, 6012
BspDI AT|CGAT 301, 337, 465, 1145, 4157, 4821
BspEI T|CCGGA 4185, 4767
BspHI T|CATGA 493, 1369, 3291, 4641
BsrFI Pu|CCGGPy 6408
BsrGI T|GTACA 2233, 4883
BssKI |CCNGG 4454, 6042
BstBI TT|CGAA 34
BstF5I GGATGNN| 2252, 3712, 4302, 4573, 5133, 5923
BstNI CC|[AT]GG 6042
BstUI CG|CG 2787, 4395, 4919, 6109, 6236
BstYI Pu|GATCPy 1483, 4358, 5532
BstZ17I GTA|TAC 1721, 1982
Bsu36I CC|TNAGG 3154
BtgI C|CPuPyGG 4223
BtrI CAC|GTC 1895
Cac8I GCN|NGC 4398, 6408
Cfr10I [AG]|CCGG[TC] 6408
ClaI AT|CGAT 301, 337, 465, 1145, 4157, 4821
DdeI C|TNAG 28, 968, 3153, 3239, 3256, 3925, 5176
DpnI GA-CH3|TC 298, 462, 681, 1032, 1189, 1482, 2469, 4154, 4357, 4682, 4728, 4763, 5277, 5395, 5531, 5556, 5674, 6144
DpnII |GATC 298, 462, 681, 1032, 1189, 1482, 2469, 4154, 4357, 4682, 4728, 4763, 5277, 5395, 5531, 5556, 5674, 6144
DraI TTT|AAA 591, 957, 1877, 2659, 2889, 3163, 3484, 3526, 3557, 4141, 4749, 6329
DrdI GACNNNN|NNGTC 814, 1379, 2791
EaeI Py|GGCCPu 4220
EcoNI CCTNN|NNNAGG 5842
EcoO109I PuG|GNCCPy 4432
EcoRV GAT|ATC 514
Fnu4HI GC|NGC 4254, 4389, 4527, 4548, 4584, 5159, 6238
HaeII PuGCGC|Py 6222
HaeIII GG|CC 598, 3633, 4062, 4219
HhaI GCG|C 4394, 4918, 6221, 6235
HinP1I G|CGC 4394, 4918, 6221, 6235
HincII GTPy|PuAC 22, 672, 3117, 3412, 4233, 5863
HindIII A|AGCTT 502, 1248, 6457
HinfI G|ANTC 24, 339, 530, 814, 1908, 2064, 2158, 3443, 3944, 4159, 4171, 4601, 5150, 5748, 5927, 5982, 6391
HpaI GTT|AAC 3412, 5863
HpaII C|CGG 854, 4184, 4238, 4454, 4467, 4766, 6407
Hpy188I TCN|GA 27, 1030, 1321, 1701, 2207, 3743, 4426, 4776, 5275, 5529, 5554, 5946, 6388
Hpy99I CG[AT]CG| 2967, 3780, 4264
HpyCH4III ACN|GT 106, 716, 1354, 1420, 1919, 2082, 2168, 2278, 2456, 3251, 3761, 4224, 4248, 4476, 4507
HpyCH4IV A|CGT 310, 410, 471, 1109, 1360, 1402, 1434, 1525, 1894, 1938, 2256, 2965, 3367, 3507, 4067, 4630, 4647, 5473, 5735, 5765, 6249
HpyCH4V TG|CA 179, 447, 843, 1179, 1622, 2004, 2988, 3186, 3278, 3685, 3720, 3801, 4936, 5621, 6011, 6057
MboI |GATC 298, 462, 681, 1032, 1189, 1482, 2469, 4154, 4357, 4682, 4728, 4763, 5277, 5395, 5531, 5556, 5674, 6144
MfeI C|AATTG 5577, 6104
MluI A|CGCGT 2788
MscI TGG|CCA 4220
MseI T|TAA 51, 102, 134, 201, 382, 590, 639, 910, 956, 1039, 1074, 1116, 1637, 1654, 1706, 1731, 1743, 1755, 1797, 1804, 1868, 1876, 1956, 1995, 2020, 2025, 2041, 2125, 2193, 2313, 2429, 2460, 2502, 2557, 2658, 2758, 2813, 2822, 2851, 2888, 2906, 2911, 3162, 3193, 3411, 3430, 3483, 3499, 3504, 3525, 3544, 3556, 3601, 3716, 3749, 3754, 3791, 3814, 3828, 3986, 4140, 4446, 4674, 4713, 4748, 4842, 5266, 5469, 5493, 5512, 5583, 5651, 5663, 5702, 5738, 5827, 5837, 5862, 6047, 6196, 6328, 6460
MslI CAPyNN|NNPuTG 415, 1272, 1528, 4228, 4414, 4631, 5146
MspA1I C[AC]G|C[GT]G 2450
MspI C|CGG 854, 4184, 4238, 4454, 4467, 4766, 6407
MwoI GCNNNNN|NNGC 4260, 4398, 4581, 4927, 5367, 5985
N.BstNBI GAGTCNNNN|N 819, 5155, 5932
NaeI GCC|GGC 6408
NciI CC|[CG]GG 4454
NdeI CA|TATG 576
NgoMIV G|CCGGC 6408
NlaIII CATG| 177, 415, 492, 650, 841, 1181, 1368, 1548, 1724, 1786, 1904, 2986, 3290, 3385, 3803, 4092, 4640, 4934, 4950, 5442, 5613, 5677, 6095, 6318
NlaIV GGN|NCC 553, 2101, 6405
NsiI ATGCA|T 180, 844, 1180, 3721, 3802
NspI PuCATG|Py 1725, 3386, 4093, 4935, 5443
PaeR7I C|TCGAG 214
PciI A|CATGT 1725, 3386, 5443
PmlI CAC|GTG 4068
PpuMI PuG|G[AT]CCPy 4432
PshAI GACNN|NNGTC 2382
PsiI TTA|TAA 885, 1203, 1950, 3147, 4913
PspGI |CC[AT]GG 6042
PvuI CGAT|CG 682, 5278
PvuII CAG|CTG 2450
RsaI GT|AC 713, 916, 1436, 1789, 1940, 2073, 2232, 4882, 5046, 5771, 6099
Sau3AI |GATC 298, 462, 681, 1032, 1189, 1482, 2469, 4154, 4357, 4682, 4728, 4763, 5277, 5395, 5531, 5556, 5674, 6144
Sau96I G|GNCC 328, 553, 599, 1028, 1429, 4063, 4431
ScaI AGT|ACT 714
ScrFI CC|NGG 4454, 6042
SexAI A|CC[AT]GGT 6043
SfcI C|TPuPyAG 535, 1024, 1974, 2629
SmlI C|TPyPuAG 214, 2054, 6424
SnaBI TAC|GTA 1403, 1435, 1939, 4648
SpeI A|CTAGT 4985
SspI AAT|ATT 130, 1125, 2680, 3626, 3824, 5655, 6431
StyI C|C[AT][AT]GG 3330
SwaI ATTT|AAAT 1878
Taqƒ¿I T|CGA 33, 213, 300, 336, 464, 679, 989, 1144, 1191, 1375, 2160, 2599, 2968, 4156, 4820, 5667, 5902
TfiI G|A[AT]TC 339, 530, 1908, 3443, 3944, 4159, 4171, 4601, 5748, 5982, 6391
TliI C|TCGAG 214
TseI G|C[AT]GC 5159
Tsp45I |GT[CG]AC 1659, 2375, 3299, 4473, 4479
Tsp509I |AATT 142, 198, 246, 269, 289, 380, 386, 393, 403, 452, 523, 587, 603, 707, 722, 737, 826, 904, 1037, 1135, 1286, 1628, 1635, 1644, 1704, 1737, 1758, 1771, 1860, 1873, 1944, 1954, 1997, 2023, 2094, 2113, 2123, 2163, 2357, 2399, 2411, 2421, 2427, 2504, 2528, 2534, 2603, 2662, 2849, 2883, 2938, 3054, 3073, 3124, 3141, 3178, 3204, 3217, 3362, 3371, 3486, 3502, 3521, 3552, 3599, 3603, 3657, 3693, 3747, 3751, 3830, 4008, 4755, 4972, 5479, 5496, 5510, 5525, 5576, 5700, 5709, 5753, 5825, 5888, 6103, 6378, 6474
TspRI NNCA[CG]TGNN| 109, 447, 2083, 5541, 6509
XbaI T|CTAGA 3209, 5725, 6032
XcmI CCANNNNN|NNNNTGG 187
XhoI C|TCGAG 214
XmnI GAANN|NNTTC 1456, 5748


Click here to view TAIR data

>AT4G36900 genomic sequence (4201-4791,) length:6523
aaagcaaact tttttagtta tgttgactct gagttcgaat ataacaccac 
50
gattaaagag aactattttc cttttgtatg tatagactat ataacatata 
100
ttattaacag tgaaagcagg aagttttcaa atattttaat atgaattgag 
150
tatataagat gtatatatag ataccttcca tgcatatttt ggctaatgaa 
200
atttaagaaa aggctcgagt gttcttcaaa ctttctatat ataatgaaat 
250
tatctgtgaa gaaataatga aattatcgtg gtttagtaaa aattgtagag 
300
atcgataagg gacgtaaact atgtctgtgg tcctttatcg attcaagggt 
350
atgcttctat tgtttgtcct cccaaaagat aaattaaaat tttgaatttg 
400
gggtaattgg cacgttcatg tgccaaccag ttcacagcta atccccactg 
450
cataattatc tatgatcgat atacgtttca ttctagcaaa aatcatgata 
500
taagctttct agggatatcc aataaatttg gaatctacag agacgataaa 
550
tagggtccat attatattat acgcacatat gacacataaa tttaaaagtg 
600
gcccaatttt atttttattt taccaaaaaa tagctagaga ttaagtttat 
650
acatgggaga acgaatataa tgttgactac tcgatcgtat ccaaaatacg 
700
aaaatgaaaa ttgagtactg tgtaattgta tagaatataa ttggtcgtat 
750
atccttgaag caaggaggat ttttttagaa aaacgaagga aatgagagaa 
800
aaaaacagac aaaggagtca tttgagtaat tctaaaaaat gtcatgcatc 
850
gctttccggc actaaacaag caacaagtgg cagattataa atgataagta 
900
tagagaattg tttaatagta cagacaaaag ctggattatc aatgacaaaa 
950
tatctattta aagtcagcct cagtttcttc agttttatct tcgatgattg 
1000
gtttagttat agagatatat tatctatagg tccgatccaa ttaaagttgc 
1050
gtttggaaaa tatgattttt gcttgttaaa caaaaaaaaa aatcttcttt 
1100
ttttgaacaa acgtctgtta aacaaatatt atcataaatt tgttatcgat 
1150
ttagatagtt ttttgtagat acttgatgta tgcatgaaag gatcgaaact 
1200
ttttataaaa taaatagttt actaaaaatg ttttgataac aactaacaag 
1250
ctttggacac tttaggtcat tgttatgaaa aaacactaat ttgatagtag 
1300
ctcacgagta aaatcttgtg gtcagagttg tagtgaataa atggctttac 
1350
atatacggtt tacgttggtc atgacttcga tgtcggtcgc atctataaga 
1400
tttacgtata tatatatcat acagtatatg gacctacgta catctcgtat 
1450
tgaaacattt ccgtatgtat attcttatta ttggatcttt tggtgagtaa 
1500
tccaagctat cctatgacat actcacacgt atgaaaaatg ctttgatgtc 
1550
atgttggcta aacaaatgat atatatacat tattgaggaa agtttgctaa 
1600
acaatatata aatatattct atttgcagaa atttggaatt aagataatta 
1650
ttcgtttaag tcaccttacc cgaataccaa aagttaccag aaatgtttgc 
1700
ttctgaatta aaagattagt gtatacatgt cattaaataa ttgattaata 
1750
ctgacattaa attcctacat agaattttgg tatttttcat gtactgattt 
1800
aagttttaac catctaaata acaaaccatt atactatata ctaataacca 
1850
atctagcata aaatttatat taaaaattta aataagtaat ctaacacgtc 
1900
aatcgcatga ttccataaaa cagtccatct acaacgcata cgtacaattt 
1950
tataaaatta agagttttat tacctatagt cgtatactat ttttgtttaa 
2000
ttttatgcaa tagtttcagg cttaaattaa atatatttat tcttaatgtg 
2050
tggctcaagc attagactcc aaaggtactt tcactgtttc caaataatta 
2100
ggttccattt gagaaattgc cacaaattaa tcttccaaag ttgtgaagta 
2150
taaatatgga ctcgaattac agttttagcc ctacatccct ttgtttaatg 
2200
acgatattca gaagggtatt tcaataaata agtgtacatc gctattgcgt 
2250
ggatggaacg tctatttcca aacgccatac agtatccacc gaccaccgac 
2300
ctaaactttt ttttttaatg aatagaaaaa ataatatata ttctattctt 
2350
gtaacaaaaa tttggagagt ttattgtgac taatgtcagt tgttgtttgt 
2400
aattatttag aaaattgttc ataattggaa ttaagaatac aacttttatc 
2450
agctgaacgg tttaaggttg gatcacctat tcacccacac aaagttttgg 
2500
tatttaatta tagacaaaaa tgtaagaaaa attggaattt tttagtaagt 
2550
ttctcatctt aaccaaaaat atatagtaat gatgtgtttg aaaagagaag 
2600
tcgaaattcc ctataaaatc tacaactact atagaaaaaa agtttcgttt 
2650
attatatctt taaaattttg aaatgtagta atattagtaa aacaaaaaaa 
2700
aatgaagaag aagaataaca tagaaaataa ggaaagacaa agctcctcaa 
2750
aaatcccact taacttgtcc ccagaacaga aggagacacg cgtgtcatta 
2800
ccgcctcttc cctattaaac attttaaggc ataaaagcaa taaataagta 
2850
aattaatcgt attattgctt gaacatttct gtataatttt taaactccta 
2900
aatcagttta agttaaatac catttattat tgtttcccaa attccacaac 
2950
aacgacccac tttcctacgt cgatactatt cttcttccat gcaatcaata 
3000
aatatcctct gtttacttgt agtttcagtt tattttattt gggtaagagt 
3050
ttttcaattt attgacgatt tgacaatttg aacgacatac atatatcata 
3100
catatatagt ccaatagtca actcaaattg aatatatcgt agaattttat 
3150
aacctaaggt tatttaaaat agttgaacga attgccgtgc aacattaaga 
3200
atataaattc tagaataaaa ttttgtattt taccactagc tgagatacta 
3250
gacagtctaa gaaatgtaaa aaactcattt gcaacatcta tcatgaaatg 
3300
tgactgatat atcatagatt tatctaaacc ctaggataat aggggataat 
3350
aatactaaaa taaaattgac gtaattgatg atgaaacatg ttttattttc 
3400
caaagtgagg cgttaactct tatattgttg attaaaatca caagattcac 
3450
acaatatcaa gacgcaatct atccctatcc atttttaaat tacaatatcc 
3500
ttaaattaac gtgtgtataa acaattttaa atactccttt attttttaat 
3550
aacaatttta aatataccta tattatacaa taatgatttc caataatagt 
3600
aattaattag atgccaacgg agaaaaatat tagaggccat aacaggctat 
3650
gacaaaataa ttgtgatttg agctatgata aatcgttgca ttcaaatttt 
3700
atttagttga ggatgtttta atgcatatag taacgctgat atatcggaaa 
3750
ttaatttaag aaccgtccaa tggaaagagc cgacgagcat tattaaataa 
3800
gatgcatgag tgtatttaac actaatattt taattccgtc caaataataa 
3850
agacaaaata taataactac gatttatcta tatgtgtata tatagtgtca 
3900
gggaagatga gattgttgtc tctgtcttag aatatatata gagagaatca 
3950
aaaaaaaaaa aaagaatata tatatgagaa agagttatta agagatttta 
4000
gtgtcggtga attttttgaa acttcttctc ttttgcggtt tcgtgttcca 
4050
ctcctctctt cttggcccac gtgttcatca atctctccct ccgcatgtaa 
4100
tcgcttcgcc gtcaatatca catctttctt cttctttatc tttaaaatct 
4150
ctttagatcg attcttttgt ggattcttga aatctccgga gaaaaccact 
4200
ATGGAGACGG CGACTGAAGT GGCCACGGTG GTGTCAACTC CGGCGGTTAC 
4250
GGTTGCGGCG GTGGCGACGA GGAAGAGAGA TAAGCCGTAT AAAGGGATAA 
4300
GGATGAGGAA GTGGGGGAAG TGGGTGGCGG AGATAAGAGA GCCTAATAAA 
4350
AGGTCAAGGA TCTGGCTTGG CTCTTACTCT ACTCCTGAAG CGGCGGCGCG 
4400
TGCTTACGAC ACGGCGGTGT TTTATCTCCG AGGTCCTTCT GCTCGGCTTA 
4450
ACTTCCCGGA GCTTTTAGCC GGAGTGACGG TGACGGGAGG AGGCGGAGGA 
4500
GGAGTGAACG GTGGTGGAGA TATGTCGGCG GCGTATATAA GGAGAAAAGC 
4550
GGCGGAGGTT GGAGCACAAG TGGATGCGTT AGAAGCGGCG GGGGCGGGAG 
4600
GGAATCGTCA TCATCATCAT CATCAACATC AACGTGGTAA TCATGATTAC 
4650
GTAGATAATC ATAGTGATTA TCGTATTAAT GATGATCTTA TGGAGTGTAG 
4700
TAGTAAAGAA GGGTTTAAGA GGTGTAATGG ATCGTTGGAA CGGGTTGATT 
4750
TAAACAAATT ACCCGATCCG GAAACTTCAG ATGACGATTA Ggaaagcaaa 
4800
aaatagaaac aaataatagt atcgatttgt ttttcacttt tcgttaagtt 
4850
tgttcttcct tcatccaaac aaaaaaaaaa gttgtacaag gaagattaga 
4900
gaatgtttgt ctttataatg cgcggaggtt gctaacatgc accacctcct 
4950
ccatgagttt gtttgtgatt actaatttat tattactagt gtaatgatag 
5000
ttctccataa atagttttta ctcaatcccc ctcaaacttc tattctcgta 
5050
cttcagttac acaagtgttt caatgtttca gtttggttat aggtaggagg 
5100
tagtattagt atgatgttat agataaaatc tggatgggga acacggcggt 
5150
gagtcaatag cagcagaaac aggagactaa ggattgagaa gtgggagtgt 
5200
atagagagtt agagagatat tggagagaca aagagtgtcc tacaaaacaa 
5250
atatggtaag tgggtcttta acttgtccga tcgtaacaac taaagctctc 
5300
tatcctaact actaaagtca tctcttttct ttcttctctg ttttctaatc 
5350
tgttttgtgg ggcaaagaca gcaaaaactc acatatcaca aaacttgatc 
5400
atttcttgtg ctatggtctt gttttgaaaa gaccagtctc aaacatgtgt 
5450
ttctttctcc attagagagc ttaaacgtga aatttgacca agagttaaat 
5500
tcttttgacc taattaaatc actagaaatt cagatctatc agtgtttttc 
5550
gccatcagat caccacaact aaaggtcaat tgttttaagg tttcgttaga 
5600
cagctaatga tgagcatgac cttgcaacta acactcttgt aacttgatat 
5650
tattaatatt acttttaatc gagtagatca tggaagttct tgacaaatga 
5700
caattaacga aatttgatta ccaatctaga gcctccacgt taagaaaaga 
5750
ttccaatttc acatatacgt ttgtacggac gaaaccaaga aggtaaagga 
5800
aagatatttt tggttgaacc aaaatcaatt aaaatacctt aaaaaggttt 
5850
gttactttgg tggttaacca aatgtagaaa gtgtgaaaca attttttttt 
5900
ttctcgaaat gaaagcatat tggatgagag tcaaataccc aaagcatctg 
5950
ataacctaac ttatcaaaca aacagagaag ctgattctgc taaaatagca 
6000
aaaagttaga tgtgcactta cctttgatgc ttctagagtt taccaggttt 
6050
aacttcgttg caaaatgtcg tataagttat ggctcttatt ctaatacatg 
6100
gtacaattgt cgcggtttct cacttttatt ctctggagaa tgtttgatca 
6150
ttgctttcct ctacaaagcc attttcttgt ttggtatata tactacctta 
6200
aTCAAGCATT CCTATCACCA GAGCGCTTTA TTTGAAGCGC GGCTCTAACC 
6250
ACGTTTCCTC TTGTGATGAT ACCAACcttt tttcaaaagg aaatataaaa 
6300
atagataagc gatgcgaaac atggtgtatt taaaagttca atgcgagatg 
6350
tgtaaatgta aaatctctct tctcttacCA ATTTGCCATC AGAATCTACC 
6400
ACAGGGAGCC GGCGATATTT TGTCTCAAGC AATATTctag tggaaaatag 
6450
aataataagc tttaagttag agaagaattt agatagagat gagaaaagaa 
6500
atgacggcac tgaaaaaaag gaa
6550