fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

>>AT4G36900 (DEAR4, RAP2.10)

Alias DEAR4, RAP2.10
TF Classification
FioreDBAP2_ERF (Click to show phylogenetic tree)
RARTFERF
AtTFDBAP2-EREBP
PlnTFDBAP2-EREBP (v3.0), AP2-EREBP (v1.0)
DATFAP2-EREBP
TAIR short description DREB AND EAR MOTIF PROTEIN 4, related to AP2 10 (.1)
TAIR annotation encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family (RAP2.10). The protein contains one AP2 domain. There are 16 members in this subfamily including RAP2.9 and RAP2.1. (.1)
Gene model
Gene model cDNA support
AT4G36900.1 50
Entry clone (w/o stop) RE_0113
External link
General info TAIR DATA
Genomic seq TAIR seq viewer
SNP SALK SNP Viewer
T-DNA tag line T-DNA Express
miRNA Search ASRP
Phylogeny SALAD database
Promoter ppdb
Microarray data
FioreDB
ATTED-II ATTED-II data
NCBI GEO NCBI GEO profile
NASC NASCarray_SpotHistory NASCarray_DigitalNorthern
Genevestigator Genevestigator
eFP Browser Developmental Map Abiotic Stress
AtGenExpress Development Hormone Abiotic Stress Light Pathogen
Gene Ontology (GO)
(F) 3677: DNA or RNA binding ->DNA binding
(F) 3700: transcription factor activity ->transcription factor activity, sequence-specific DNA binding
(C) 5634: nucleus ->nucleus
(P) 6351: transcription,DNA-dependent ->transcription, DNA-templated
(P) 6355: transcription,DNA-dependent ->regulation of transcription, DNA-templated
(P) 9873: other cellular processes ->ethylene-activated signaling pathway
miRNA/tasiRNA
Target sequence miRNA/tasiRNA sequence Map
5'--3'

miRN4412: 3'-TTGGTAGTAGTAGTAGTAGT-5'
Orthologs
Type
Ia Ib II III Total
poplar 1 3 4
soybean 1 1 6 8
rice 1 2 3
sorghum 1 1 2
physcomitrella
Total 2 3 12 17
Repression motif 

       

       

        Repression motif
in putative orthologs		
        
        

       

       

        Status
        
         

          
Plasmid construction -> done

          
Plasmid construction -> done

          
Transformed -> done

          
T1 seed harvested -> done

          
T2 seed harvested -> done

         

        		
       

       

        CRES-T phenotype from individual project

View all photo        		
        —cA•¨ŠúA‘S‰è¶‚¦‚ōª‚ª‚Ù‚Æ‚ñ‚ǐL‚Ñ‚È‚¢, —t‚Ì•Ó‰‚̈ꕔ‚ª•—ΐF‚É‚È‚èAª‚ªL‚Ñ‚¸A•—ΐF•”•ª‚©‚çŒÍ‚ê‚Ä‚­‚é(18/24), ‚Ù‚Æ‚ñ‚nj͎€(18/22)

         abnormal seedling (direct input)


 and more...        		
       

       

        CRES-T phenotype from publication
        

        
       


       

        CRES-T phenotype from bulk project
        

        
       

       

        Phenotype in ornamental plants


        
         

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