fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G36920 FL1, FLO2, AP2 FLORAL MUTANT 2, FLOWER 1, APETALA 2, Integrase-type DNA-binding superfamily protein (.1.2)

>AT4G36920.1 CDS map

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Uncut enzymes: AatII, Acc65I, AccI, AccIII(BspMII), AfeI, AflII, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AseI, AvrII, BaeI, BalI, BanI, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BglI, BglII, BlpI, BmrI, BpmI, BsaI, BsaXI, BseRI, BsgI, BsiEI, BsiHKAI, BsiWI, BsmAI, BsmBI, BsmFI, BspDI, BspEI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BsrGI, BssHII, BssSI, BstAPI, BstEII, BstNI, BstXI, BstZ17I, Bsu36I, BtrI, BtsI, ClaI, DraI, DraIII, EaeI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRI, FauI, FokI, FseI, FspI, HaeII, HgaI, HhaI, HinP1I, HindIII, HpaI, HphI, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MscI, , NarI, NcoI, NheI, NotI, NruI, NsiI, NspI, PI-PspI, PI-SceI(VDE), PacI, PciI, PflFI, PflMI, PleI, PmeI, PmlI, PpuMI, PshAI, PsiI, PspGI, PspOMI, PvuI, RsrII, SacI, SalI, SapI, SbfI, ScaI, SexAI, SfaNI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SpeI, SphI, SspI, StuI, SwaI, Tth111I, XbaI, XmaI, XmnI
Name Recognition sequence Cut positions
AccII(FnuDII) CG|CG 298
AciI C|CGC 297, 321
AclI AA|CGTT 316
AflIII A|CPuPyGT 621
AgeI A|CCGGT 1133
AluI AG|CT 104, 112, 307, 496, 514, 706, 772, 781, 793, 917
ApoI Pu|AATTPy 526, 927
AvaI C|PyCGPuG 242, 500, 653
AvaII G|G[AT]CC 369
BamHI G|GATCC 133
BanII GPuGCPy|C 245
BfaI C|TAG 281, 777
BsaAI PyAC|GTPu 622
BsaBI GATNN|NNATC 432
BsaHI GPu|CGPyC 820
BsaJI C|CNNGG 241, 299, 531, 605, 764
BsaWI [AT]|CCGG[AT] 289, 421, 1030, 1133
BslI CCNNNNN|NNGG 203, 427, 1070
BsmI GAATGCN| 1035
BsoBI C|PyCGPuG 242, 500, 653
Bsp1286I G[GAT]GC[CAT]|C 245
BspHI T|CATGA 1283
BsrFI Pu|CCGGPy 339, 413, 1133
BsrI ACTGGN| 251
BssKI |CCNGG 155, 1071
BstBI TT|CGAA 663, 939
BstF5I GGATGNN| 972
BstUI CG|CG 298
BstYI Pu|GATCPy 6, 88, 133, 279
BtgI C|CPuPyGG 299, 531
Cac8I GCN|NGC 339
Cfr10I [AG]|CCGG[TC] 339, 413, 1133
DdeI C|TNAG 199, 388, 467, 725, 966, 1123
DpnI GA-CH3|TC 5, 87, 132, 278, 291, 375, 836, 899
DpnII |GATC 5, 87, 132, 278, 291, 375, 836, 899
DrdI GACNNNN|NNGTC 766
EcoRV GAT|ATC 547
Fnu4HI GC|NGC 321, 492, 516, 774, 795, 962, 1075, 1119, 1176, 1253
HaeIII GG|CC 1147
HincII GTPy|PuAC 1167
HinfI G|ANTC 45, 207, 359, 432, 870, 881, 990, 1102, 1192
HpaII C|CGG 154, 288, 338, 412, 420, 1029, 1070, 1115, 1132
Hpy188I TCN|GA 48, 135, 160, 276, 839, 1214
Hpy99I CG[AT]CG| 14, 563, 1153
HpyCH4III ACN|GT 448, 1109
HpyCH4IV A|CGT 315, 404, 621
HpyCH4V TG|CA 490, 684, 796, 1177, 1254
MboI |GATC 5, 87, 132, 278, 291, 375, 836, 899
MseI T|TAA 150, 261, 522, 599, 1038, 1221
MslI CAPyNN|NNPuTG 692, 1004
MspA1I C[AC]G|C[GT]G 113, 299, 323
MspI C|CGG 154, 288, 338, 412, 420, 1029, 1070, 1115, 1132
MwoI GCNNNNN|NNGC 306, 344, 492, 637, 780
N.BstNBI GAGTCNNNN|N 364, 875
NaeI GCC|GGC 339
NciI CC|[CG]GG 155, 1071
NdeI CA|TATG 506
NgoMIV G|CCGGC 339
NlaIII CATG| 488, 1282
NlaIV GGN|NCC 133, 336
PaeR7I C|TCGAG 500, 653
PstI CTGCA|G 1178, 1255
PvuII CAG|CTG 113
RsaI GT|AC 417, 617, 623
SacII CCGC|GG 299
Sau3AI |GATC 5, 87, 132, 278, 291, 375, 836, 899
Sau96I G|GNCC 369, 1147
ScrFI CC|NGG 155, 1071
SfcI C|TPuPyAG 1178, 1255
SmlI C|TPyPuAG 500, 653
StyI C|C[AT][AT]GG 605
Taqƒ¿I T|CGA 123, 499, 561, 652, 662, 709, 756, 768, 909, 938, 1151
TfiI G|A[AT]TC 45, 207, 432, 881, 990, 1102, 1192
TliI C|TCGAG 500, 653
TseI G|C[AT]GC 324, 492, 516, 774, 795, 1075, 1176, 1253
Tsp45I |GT[CG]AC 180, 678, 825
Tsp509I |AATT 98, 525, 551, 596, 720, 926, 935, 1052, 1065, 1223, 1247
TspRI NNCA[CG]TGNN| 251, 484, 1110
XcmI CCANNNNN|NNNNTGG 1140
XhoI C|TCGAG 500, 653


Click here to view TAIR data

>AT4G36920.1 length:1299
ATGTGGGATC TAAACGACGC ACCACACCAA ACACAAAGAG AAGAAGAATC 
50
TGAAGAGTTT TGTTATTCTT CACCAAGTAA ACGGGTTGGA TCTTTCTCTA 
100
ATTCAAGCTC TTCAGCTGTT GTTATCGAAG ATGGATCCGA TGACGATGAA 
150
CTTAACCGGG TCAGACCCAA TAACCCACTT GTCACCCATC AGTTCTTCCC 
200
TGAGATGGAT TCTAACGGCG GTGGTGTTGC TTCTGGCTTT CCTCGGGCTC 
250
ACTGGTTTGG TGTTAAGTTT TGTCAGTCGG ATCTAGCCAC CGGATCGTCC 
300
GCGGGTAAAG CTACCAACGT TGCCGCTGCC GTAGTGGAGC CGGCACAGCC 
350
GTTGAAAAAG AGTCGGCGTG GACCAAGATC AAGAAGTTCT CAGTATAGAG 
400
GTGTTACGTT TTACCGGCGT ACCGGAAGAT GGGAATCTCA TATTTGGGAC 
450
TGTGGGAAAC AAGTTTACTT AGGTGGATTT GACACTGCTC ATGCAGCAGC 
500
TCGAGCATAT GATAGAGCTG CTATTAAATT CCGTGGAGTA GAAGCGGATA 
550
TCAATTTCAA CATCGACGAT TATGATGATG ACTTGAAACA GATGACTAAT 
600
TTAACCAAGG AAGAGTTCGT ACACGTACTT CGCCGACAAA GCACAGGCTT 
650
CCCTCGAGGA AGTTCGAAGT ATAGAGGTGT CACTTTGCAT AAGTGTGGTC 
700
GTTGGGAAGC TCGAATGGGT CAATTCTTAG GCAAAAAGTA TGTTTATTTG 
750
GGTTTGTTCG ACACCGAGGT CGAAGCTGCT AGAGCTTACG ATAAAGCTGC 
800
AATCAAATGT AACGGCAAAG ACGCCGTGAC CAACTTTGAT CCGAGTATTT 
850
ACGATGAGGA ACTCAATGCC GAGTCATCAG GGAATCCTAC TACTCCACAA 
900
GATCACAACC TCGATTTGAG CTTGGGAAAT TCGGCTAATT CGAAGCATAA 
950
AAGTCAAGAT ATGCGGCTCA GGATGAACCA ACAACAACAA GATTCTCTCC 
1000
ACTCTAATGA AGTTCTTGGA TTAGGTCAAA CCGGAATGCT TAACCATACT 
1050
CCCAATTCAA ACCACCAATT TCCGGGCAGC AGCAACATTG GTAGCGGAGG 
1100
CGGATTCTCA CTGTTTCCGG CGGCTGAGAA CCACCGGTTT GATGGTCGGG 
1150
CCTCGACGAA CCAAGTGTTG ACAAATGCTG CAGCATCATC AGGATTCTCT 
1200
CCTCATCATC ACAATCAGAT TTTTAATTCT ACTTCTACTC CTCATCAAAA 
1250
TTGGCTGCAG ACAAATGGCT TCCAACCTCC TCTCATGAGA CCTTCTTGA
1300

>AT4G36920.1 longest ORF length:432
MWDLNDAPHQ TQREEESEEF CYSSPSKRVG SFSNSSSSAV VIEDGSDDDE 
50
LNRVRPNNPL VTHQFFPEMD SNGGGVASGF PRAHWFGVKF CQSDLATGSS 
100
AGKATNVAAA VVEPAQPLKK SRRGPRSRSS QYRGVTFYRR TGRWESHIWD 
150
CGKQVYLGGF DTAHAAARAY DRAAIKFRGV EADINFNIDD YDDDLKQMTN 
200
LTKEEFVHVL RRQSTGFPRG SSKYRGVTLH KCGRWEARMG QFLGKKYVYL 
250
GLFDTEVEAA RAYDKAAIKC NGKDAVTNFD PSIYDEELNA ESSGNPTTPQ 
300
DHNLDLSLGN SANSKHKSQD MRLRMNQQQQ DSLHSNEVLG LGQTGMLNHT 
350
PNSNHQFPGS SNIGSGGGFS LFPAAENHRF DGRASTNQVL TNAAASSGFS 
400
PHHHNQIFNS TSTPHQNWLQ TNGFQPPLMR PS
450