fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G38960 B-box type zinc finger family protein (.1.2.3)

>AT4G38960.2 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NotI, PacI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
NheI G|CTAGC 12
PstI CTGCA|G 404


Click here to view TAIR data

>AT4G38960.2 length:453
ATGTGCAACA AGCTAGCTAG TCGGCATGTA CGTGTTGGTT TAGCTGAACC 
50
AAGCAATGCC CCATGCTGTG ATATATGCGA AAATGCACCT GCCTTCTTTT 
100
ACTGTGAGAT AGACGGTAGT TCTCTTTGTC TGCAATGTGA CATGGTAGTA 
150
CATGTTGGTG GCAAGAGAAC ACACGGTCGG TTTCTTTTGC TGAGACAGAG 
200
AATCGAGTTT CCAGGGGATA AGCCTAAAGA AAACAATACG AGGGACAATT 
250
TGCAGAACCA AAGAGTCTCT ACAAATGGAA ATGGTGAAGC CAATGGGAAG 
300
ATTGATGACG AAATGATTGA TCTAAATGCT AATCCACAAA GAGTACATGA 
350
GCCATCATCA AATAACAACG GGATTGATGT AAATAACGAG AACAATCACG 
400
AGCCTGCAGG CCTTGTACCA GTTGGACCCT TTAAACGAGA GTCTGAGAAG 
450
TGA
500

>AT4G38960.2 longest ORF length:150
MCNKLASRHV RVGLAEPSNA PCCDICENAP AFFYCEIDGS SLCLQCDMVV 
50
HVGGKRTHGR FLLLRQRIEF PGDKPKENNT RDNLQNQRVS TNGNGEANGK 
100
IDDEMIDLNA NPQRVHEPSS NNNGIDVNNE NNHEPAGLVP VGPFKRESEK 
150