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| Locus | Common name | Short description |
| AT4G39100 | SHL1 | short life, PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein (.1), PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein (.2) |
>AT4G39100.1 CDS map
>>Show genomic map
Uncut enzymes: AatII, Acc65I, AccI, AccIII(BspMII), AciI, AclI, AfeI, AflII, AflIII, AgeI, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AseI, AvaI, AvaII, AvrII, BaeI, BalI, BamHI, BanI, BanII, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BfaI, BglI, BglII, BlpI, BmrI, BpmI, BsaBI, BsaHI, BsaI, BsaWI, BsaXI, BseRI, BsgI, BsiHKAI, BslI, BsmAI, BsmBI, BsmFI, BsmI, BsoBI, Bsp1286I, BspDI, BspEI, BspHI, BspMI, BspT107I(HgiCI), BsrBI, BsrGI, BsrI, BssHII, BssSI, BstBI, BstEII, BstF5I, BstXI, BstYI, BstZ17I, BtrI, BtsI, ClaI, DraI, DraIII, DrdI, EaeI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HaeIII, HgaI, HincII, HindIII, HpaI, HphI, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MscI, MslI, MspA1I, NaeI, , NarI, NciI, NdeI, NgoMIV, NheI, NotI, NruI, NsiI, NspI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflMI, PleI, PmeI, PmlI, PpuMI, PshAI, PsiI, PspOMI, PstI, PvuII, RsrII, SacI, SacII, SalI, SapI, Sau96I, SbfI, ScaI, SfaNI, SfcI, SfiI, SfoI, SgrAI, SmaI, SpeI, SphI, SspI, StuI, SwaI, TliI, TspRI, XbaI, XcmI, XhoI, XmaI, XmnI
| Name | Recognition sequence | Cut positions |
| AccII(FnuDII) | CG|CG | 151, 166, 391 |
| AluI | AG|CT | 13, 27, 320, 523 |
| ApoI | Pu|AATTPy | 576 |
| BsaAI | PyAC|GTPu | 121 |
| BsaJI | C|CNNGG | 19, 231, 239 |
| BsiEI | CGPuPy|CG | 94, 140 |
| BsiWI | C|GTACG | 119 |
| BsrDI | GCAATGNN| | 467 |
| BsrFI | Pu|CCGGPy | 388 |
| BssKI | |CCNGG | 105, 638, 678 |
| BstAPI | GCANNNN|NTGC | 578 |
| BstNI | CC|[AT]GG | 105, 638, 678 |
| BstUI | CG|CG | 151, 166, 391 |
| Bsu36I | CC|TNAGG | 200 |
| BtgI | C|CPuPyGG | 231 |
| Cac8I | GCN|NGC | 165 |
| Cfr10I | [AG]|CCGG[TC] | 388 |
| DdeI | C|TNAG | 199, 481, 616, 670 |
| DpnI | GA-CH3|TC | 139, 159, 398 |
| DpnII | |GATC | 139, 159, 398 |
| Fnu4HI | GC|NGC | 26, 634 |
| HaeII | PuGCGC|Py | 277 |
| HhaI | GCG|C | 152, 276, 390, 631 |
| HinP1I | G|CGC | 152, 276, 390, 631 |
| HinfI | G|ANTC | 204, 336, 409 |
| HpaII | C|CGG | 387 |
| Hpy188I | TCN|GA | 99, 211, 255, 480 |
| Hpy99I | CG[AT]CG| | 97, 115, 350 |
| HpyCH4III | ACN|GT | 113, 310, 414 |
| HpyCH4IV | A|CGT | 120 |
| HpyCH4V | TG|CA | 422, 462, 579 |
| MboI | |GATC | 139, 159, 398 |
| MseI | T|TAA | 682 |
| MspI | C|CGG | 387 |
| MwoI | GCNNNNN|NNGC | 161, 578 |
| N.BstNBI | GAGTCNNNN|N | 414 |
| NcoI | C|CATGG | 231 |
| NlaIII | CATG| | 230 |
| NlaIV | GGN|NCC | 102, 235 |
| PflFI | GACN|NNGTC | 409 |
| PspGI | |CC[AT]GG | 105, 638, 678 |
| PvuI | CGAT|CG | 140 |
| RsaI | GT|AC | 118, 373 |
| Sau3AI | |GATC | 139, 159, 398 |
| ScrFI | CC|NGG | 105, 638, 678 |
| SexAI | A|CC[AT]GGT | 679 |
| SmlI | C|TPyPuAG | 31 |
| SnaBI | TAC|GTA | 121 |
| StyI | C|C[AT][AT]GG | 19, 231, 239 |
| Taqƒ¿I | T|CGA | 141, 264, 369, 653 |
| TfiI | G|A[AT]TC | 204 |
| TseI | G|C[AT]GC | 26, 634 |
| Tsp45I | |GT[CG]AC | 411 |
| Tsp509I | |AATT | 225, 377, 575, 590 |
| Tth111I | GACN|NNGTC | 409 |
Click here to view TAIR data
>AT4G39100.1 length:687
ATGCCCAAGC AAAAAGCTCC AAGGAAGCAG CTCAAGTCCT ATAAACTCAA | 50 |
ACACATCAAC AAGAGTATTC AAGAGGGAGA TGCTGTGTTG ATGCGGTCGT | 100 |
CGGAGCCTGG AAAACCGTCG TACGTAGCGA GGGTAGAGGC GATCGAGACG | 150 |
GACGCGCGTG GATCGCACGC GAAAGTTCGT GTGAGGTGGT ATTATCGCCC | 200 |
TGAGGAATCT ATCGGAGGGA GGAGACAATT CCATGGAGCC AAGGAGGTTT | 250 |
TTCTCTCTGA CCACTTCGAT TTTCAAAGCG CCGATACGAT TGAAGGAAAG | 300 |
TGTAAGGTTC ACAGTTTCAG TAGCTACACC AAACTTGACT CTGTTGGAAA | 350 |
CGACGACTTC TTCTGTCGTT TCGAGTACAA TTCCACTACC GGCGCGTTTG | 400 |
ATCCTGACAG AGTCACCGTG TTCTGCAAGT GTGAGATGCC GTATAACCCA | 450 |
GATGACTTGA TGGTGCAATG CGAGGAGTGT TCTGAGTGGT TTCATCCTTC | 500 |
TTGTATAGGA ACAACAATAG AGGAAGCTAA AAAGCCAGAT AACTTCTACT | 550 |
GCGAAGAGTG TTCCCCACAA CAGCAGAATT TGCACAACTC TAATTCAACT | 600 |
TCCAATAACA GAGATGCTAA GGTGAATGGA AAGCGCAGCC TGGAGGTAAC | 650 |
TAAATCGAAG AACAAACACA CTAAGCGACC AGGTTAA | 700 |
>AT4G39100.1 longest ORF length:228
MPKQKAPRKQ LKSYKLKHIN KSIQEGDAVL MRSSEPGKPS YVARVEAIET | 50 |
DARGSHAKVR VRWYYRPEES IGGRRQFHGA KEVFLSDHFD FQSADTIEGK | 100 |
CKVHSFSSYT KLDSVGNDDF FCRFEYNSTT GAFDPDRVTV FCKCEMPYNP | 150 |
DDLMVQCEEC SEWFHPSCIG TTIEEAKKPD NFYCEECSPQ QQNLHNSNST | 200 |
SNNRDAKVNG KRSLEVTKSK NKHTKRPG | 250 |