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| Locus | Common name | Short description |
| AT5G01310 | APTX, bHLH140 | APRATAXIN-like (.1) |
>AT5G01310.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, KpnI, NcoI, NdeI, NheI, NotI, PacI, SacI, SalI, SmaI, SpeI, XhoI
| Name | Recognition sequence | Cut positions |
| BglII | A|GATCT | 284, 1710, 2589 |
| EcoRI | G|AATTC | 583 |
| EcoRV | GAT|ATC | 1429, 2411 |
| HindIII | A|AGCTT | 913, 1153, 1342, 1597, 1910 |
| HpaI | GTT|AAC | 787, 1138 |
| PstI | CTGCA|G | 1031, 2332 |
| PvuII | CAG|CTG | 1034, 1988 |
| StyI | C|C[AT][AT]GG | 760, 1886, 2406, 2562 |
| XbaI | T|CTAGA | 979, 2289 |
Click here to view TAIR data
>AT5G01310.1 length:2739
ATGGATGATT TCAATCTTCG TAGCGAAAAC CCTAATTCAT CATCCACCAC | 50 |
TTCCTCATCC TCTTCCTCTT TCCACCGTCA CAAGAGCGAA ACCGGAAACA | 100 |
CAAAACGGTC AAGGTCAACG TCCACGTTAT CGACGGACCC TCAGAGCGTG | 150 |
GCGGCTCGCG ACAGACGGCA CCGAATTAGC GACCGTTTCA AGATTTTACA | 200 |
AAGCATGGTC CCTGGTGGTG CGAAGATGGA CACTGTATCT ATGCTTGACG | 250 |
AAGCCATTAG CTACGTCAAG TTCTTGAAGG CTCAGATCTG GTATCACCAA | 300 |
AACATGCTTC TCTTCATAAA CGACCACGAA ACTACATCAT CTTGTACTTA | 350 |
CTCTCCCGGC GCTGGAGAAT TTGGACCGAA ACTCTTTGGT TATGATGACG | 400 |
ATTATGCCCC TATAATGGAC ACATATTCAC AAGGCGTGCC ACTTACGGTT | 450 |
GCGGACTCGA AGTATACGCC GTGGTTTGGT TCGGTTGATG ATGAGCAAGA | 500 |
ACACGTCACG TATTTCAAAT ACAGGCGTGC CACACGACAC GCATTACGAG | 550 |
GGCACTGCAA TTGTATAATC GGAGAAACAG AGGAATTCGC CGATCAACGA | 600 |
GAGAAGATGG AAGTGCAAAT TGAAGAATCT GGTAAAAATC AAACCTCTCC | 650 |
GGAATCAATT GAAGCAGACA AAGCGAAGCA GATAGTGGTG CTTCTGATTG | 700 |
GTCCACCAGG AAGCGGCAAA TCGACGTTTT GTGACACCGC AATGCGTTCC | 750 |
TCTCACCGCC CTTGGTCTCG TATCTGCCAG GACATTGTTA ACAATGGCAA | 800 |
AGCTGGAACA AAGGCTCAGT GTTTAAAGAT GGCTACAGAT TCTCTTAGGG | 850 |
AAGGCAAGAG CGTCTTTATA GACAGATGCA ATCTTGACAG GGAGCAACGT | 900 |
TCAGAGTTTA TTAAGCTTGG TGGTCCTGAG TTCGAAGTTC ATGCAGTGGT | 950 |
TCTGGAGCTT CCTGCTCAGG TTTGTATATC TAGATCAGTT AAAAGAACTG | 1000 |
GTCATGAAGG AAATCTACAA GGTGGAAGAG CTGCAGCTGT TGTGAATAAG | 1050 |
ATGCTTCAGA GTAAGGAACT TCCCAAAGTG AATGAAGGGT TTTCTCGGAT | 1100 |
TATGTTTTGT TACAGTGACG CTGATGTTGA TAATGCTGTT AACATGTATA | 1150 |
ACAAGCTTGG TCCAATGGAT ACCCTTCCTT CTGGCTGTTT TGGCGAAAAA | 1200 |
AAATTAGATA CTAAAAGCCA ACCCGGTATA ATGAAGTTCT TTAAGAAAGT | 1250 |
CAGTGCTCTG CCTGCTTCAT CTTCTAATGA AGCTACTAAC ACAACTCGGA | 1300 |
AAGCTGATGA AATGACAGCA AATGTCCGAG TTTCGCCAGT CAAGCTTGGT | 1350 |
TCTGCTGATA TTGTACCTAC ACTGGCATTC CCATCAATTT CGACTGCGGA | 1400 |
TTTTCAGTTT GATCTTGAAA AGGCTTCTGA TATCATTGTG GAGAAAGCAG | 1450 |
AGGAGTTCTT GTCTAAACTT GGGACTGCGC GTCTCGTCTT GGTGGACTTG | 1500 |
AGCCGCGGGT CAAAGATTCT ATCTCTGGTC AAGGCTAAGG CTTCTCAGAA | 1550 |
GAACATTGAT TCAGCGAAAT TCTTCACATT TGTTGGGGAC ATAACTAAGC | 1600 |
TTCGTTCTGA AGGTGGTCTA CACTGTAATG TCATAGCTAA TGCTACTAAC | 1650 |
TGGCGGCTTA AACCTGGAGG TGGAGGTGTG AATGCAGCAA TATTCAAAGC | 1700 |
TGCTGGTCCA GATCTTGAGA CTGCGACAAG AGTACGAGCA AACACTCTTC | 1750 |
TTCCTGGAAA AGCCGTGGTA GTTCCTCTTC CTTCTACTTG TCCATTACAC | 1800 |
AATGCAGAAG GAATTACACA TGTCATACAT GTTCTAGGAC CAAACATGAA | 1850 |
CCCAAACCGA CCAGACAACC TTAACAACGA CTACACCAAG GGGTGCAAAA | 1900 |
CTCTCCGGGA AGCTTACACA TCTCTATTTG AAGGTTTTCT ATCAGTAGTA | 1950 |
CAGGATCAAT CGAAGTTGCC CAAACGAAGC AGTCAAACAG CTGTGTCAGA | 2000 |
TTCTGGTGAG GATATTAAGG AAGACTCTGA GAGAAACAAA AAGTACAAAG | 2050 |
GATCACAAGA TAAGGCCGTA ACTAATAATT TGGAATCAGA GTCTCTGGAG | 2100 |
GACACAAGAG GCAGTGGAAA GAAGATGAGT AAAGGATGGA ACACATGGGC | 2150 |
ATTGGCTCTC CACAGCATCG CGATGCACCC AGAGAGACAC GAGAATGTCG | 2200 |
TGCTTGAATA TTTAGACAAC ATCGTTGTCA TAAACGACCA GTACCCAAAG | 2250 |
GCGCGGAAAC ACGTGCTAGT ACTGGCGAGA CAGGAGAGTC TAGATGGGCT | 2300 |
AGAAGATGTT CGCAAAGAGA ATCTTCAACT TCTGCAGGAA ATGCACAATG | 2350 |
TTGGTCTGAA ATGGGTTGAT AGATTCCAGA ACGAGGATGC ATCTCTTATC | 2400 |
TTCCGCCTTG GATATCACTC GGTTCCCTCG ATGCGACAAC TACACTTACA | 2450 |
CGTTATAAGC CAAGACTTTA ATTCAGATAG TTTGAAGAAC AAGAAACACT | 2500 |
GGAACTCTTT CACGACCTCG TTCTTCCGTG ACTCAGTTGA TGTACTTGAA | 2550 |
GAGGTCAACA GCCAAGGCAA GGCCAATGTG GCGAGCGAAG ATCTGTTGAA | 2600 |
AGGTGAGCTG CGTTGCAATC GGTGTAGAAG CGCACACCCA AATATTCCAA | 2650 |
AACTTAAATC ACATGTCAGA AGCTGCCATT CTCAATTTCC AGACCATTTA | 2700 |
CTCCAAAACA ATCGCCTTGT GGCTAGAGCA GAGACGTAG | 2750 |
>AT5G01310.1 longest ORF length:912
MDDFNLRSEN PNSSSTTSSS SSSFHRHKSE TGNTKRSRST STLSTDPQSV | 50 |
AARDRRHRIS DRFKILQSMV PGGAKMDTVS MLDEAISYVK FLKAQIWYHQ | 100 |
NMLLFINDHE TTSSCTYSPG AGEFGPKLFG YDDDYAPIMD TYSQGVPLTV | 150 |
ADSKYTPWFG SVDDEQEHVT YFKYRRATRH ALRGHCNCII GETEEFADQR | 200 |
EKMEVQIEES GKNQTSPESI EADKAKQIVV LLIGPPGSGK STFCDTAMRS | 250 |
SHRPWSRICQ DIVNNGKAGT KAQCLKMATD SLREGKSVFI DRCNLDREQR | 300 |
SEFIKLGGPE FEVHAVVLEL PAQVCISRSV KRTGHEGNLQ GGRAAAVVNK | 350 |
MLQSKELPKV NEGFSRIMFC YSDADVDNAV NMYNKLGPMD TLPSGCFGEK | 400 |
KLDTKSQPGI MKFFKKVSAL PASSSNEATN TTRKADEMTA NVRVSPVKLG | 450 |
SADIVPTLAF PSISTADFQF DLEKASDIIV EKAEEFLSKL GTARLVLVDL | 500 |
SRGSKILSLV KAKASQKNID SAKFFTFVGD ITKLRSEGGL HCNVIANATN | 550 |
WRLKPGGGGV NAAIFKAAGP DLETATRVRA NTLLPGKAVV VPLPSTCPLH | 600 |
NAEGITHVIH VLGPNMNPNR PDNLNNDYTK GCKTLREAYT SLFEGFLSVV | 650 |
QDQSKLPKRS SQTAVSDSGE DIKEDSERNK KYKGSQDKAV TNNLESESLE | 700 |
DTRGSGKKMS KGWNTWALAL HSIAMHPERH ENVVLEYLDN IVVINDQYPK | 750 |
ARKHVLVLAR QESLDGLEDV RKENLQLLQE MHNVGLKWVD RFQNEDASLI | 800 |
FRLGYHSVPS MRQLHLHVIS QDFNSDSLKN KKHWNSFTTS FFRDSVDVLE | 850 |
EVNSQGKANV ASEDLLKGEL RCNRCRSAHP NIPKLKSHVR SCHSQFPDHL | 900 |
LQNNRLVARA ET | 950 |