| Locus |
Common name |
Short description |
| AT5G11270 |
OCP3 |
overexpressor of cationic peroxidase 3 (.1) |
>AT5G11270.1 CDS map
>>Show genomic map

Uncut enzymes: AatII, Acc65I, AccI, AccII(FnuDII), AccIII(BspMII), AclI, AfeI, AflII, AflIII, AgeI, AhdI, AlwI, Aor51HI(Eco47III), ApaI, ApaLI, ApoI, AscI, AseI, AvaII, AvrII, BaeI, BalI, BanI, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BglI, BglII, BlpI, BmrI, BpmI, BsaAI, BsaBI, BsaI, BsaXI, BseRI, BsgI, BsiEI, BsiWI, BslI, BsmAI, BsmBI, BsmFI, BsmI, BspDI, BspEI, BspHI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BsrGI, BssHII, BssKI, BstAPI, BstEII, BstNI, BstUI, BstXI, BstZ17I, BtrI, BtsI, ClaI, DraI, DraIII, DrdI, EaeI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HaeII, HaeIII, HgaI, HhaI, HinP1I, HindIII, HpaI, HphI, HpyCH4III, HpyCH4IV, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MscI, MslI, N.BstNBI, , NarI, NciI, NdeI, NheI, NotI, NruI, NspI, PI-PspI, PI-SceI(VDE), PacI, PciI, PflFI, PflMI, PleI, PmeI, PmlI, PpuMI, PshAI, PsiI, PspGI, PspOMI, PstI, PvuI, RsrII, SacII, SalI, SapI, Sau96I, SbfI, ScaI, ScrFI, SexAI, SfaNI, SfcI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SphI, SspI, StuI, SwaI, Tth111I, XbaI, XmaI
| Name |
Recognition sequence |
Cut positions |
| AciI
| C|CGC |
680, 728 |
| AluI
| AG|CT |
253, 391, 552, 567, 595, 631, 690, 787, 883, 1039, 1051 |
| AlwNI
| CAGNNN|CTG |
449, 743 |
| AvaI
| C|PyCGPuG |
395 |
| BamHI
| G|GATCC |
285 |
| BanII
| GPuGCPy|C |
1040 |
| BfaI
| C|TAG |
114, 612, 899 |
| BsaHI
| GPu|CGPyC |
31, 602 |
| BsaJI
| C|CNNGG |
11, 976 |
| BsaWI
| [AT]|CCGG[AT] |
1056 |
| BsiHKAI
| G[AT]GC[AT]|C |
1040 |
| BsoBI
| C|PyCGPuG |
395 |
| Bsp1286I
| G[GAT]GC[CAT]|C |
1040 |
| BsrFI
| Pu|CCGGPy |
28 |
| BsrI
| ACTGGN| |
451, 579 |
| BssSI
| C|TCGTG |
176 |
| BstBI
| TT|CGAA |
1000 |
| BstF5I
| GGATGNN| |
250, 343 |
| BstYI
| Pu|GATCPy |
285 |
| Bsu36I
| CC|TNAGG |
812 |
| BtgI
| C|CPuPyGG |
11 |
| Cac8I
| GCN|NGC |
28, 1038 |
| Cfr10I
| [AG]|CCGG[TC] |
28 |
| DdeI
| C|TNAG |
550, 634, 702, 745, 811, 865 |
| DpnI
| GA-CH3|TC |
284, 761, 918 |
| DpnII
| |GATC |
284, 761, 918 |
| Fnu4HI
| GC|NGC |
566, 630, 692, 738, 949 |
| HincII
| GTPy|PuAC |
85 |
| HinfI
| G|ANTC |
104, 185, 196, 777 |
| HpaII
| C|CGG |
27, 1055 |
| Hpy188I
| TCN|GA |
101, 107, 221, 339, 866 |
| Hpy99I
| CG[AT]CG| |
32, 55, 67, 603 |
| HpyCH4V
| TG|CA |
586, 846 |
| MboI
| |GATC |
284, 761, 918 |
| MseI
| T|TAA |
303, 570, 618 |
| MspA1I
| C[AC]G|C[GT]G |
632, 788 |
| MspI
| C|CGG |
27, 1055 |
| MwoI
| GCNNNNN|NNGC |
594, 689 |
| NaeI
| GCC|GGC |
28 |
| NcoI
| C|CATGG |
11 |
| NgoMIV
| G|CCGGC |
28 |
| NlaIII
| CATG| |
10, 839 |
| NlaIV
| GGN|NCC |
285 |
| NsiI
| ATGCA|T |
587 |
| PaeR7I
| C|TCGAG |
395 |
| PvuII
| CAG|CTG |
632, 788 |
| RsaI
| GT|AC |
161 |
| SacI
| GAGCT|C |
1040 |
| Sau3AI
| |GATC |
284, 761, 918 |
| SmlI
| C|TPyPuAG |
395 |
| SpeI
| A|CTAGT |
613 |
| StyI
| C|C[AT][AT]GG |
11, 976 |
| Taqƒ¿I
| T|CGA |
187, 394, 429, 804, 999 |
| TfiI
| G|A[AT]TC |
104, 185, 196, 777 |
| TliI
| C|TCGAG |
395 |
| TseI
| G|C[AT]GC |
566, 630, 692, 738, 949 |
| Tsp45I
| |GT[CG]AC |
412, 447, 676, 963 |
| Tsp509I
| |AATT |
139, 560, 666 |
| TspRI
| NNCA[CG]TGNN| |
451 |
| XcmI
| CCANNNNN|NNNNTGG |
941 |
| XhoI
| C|TCGAG |
395 |
| XmnI
| GAANN|NNTTC |
671, 836, 997 |
Click here to view TAIR data
>AT5G11270.1 length:1065
ATGATAAAAG CCATGGCTCT ATCTTCTGCC GGCGTCGTCT CTCATCTTCA | 50 |
TCCTCCGTCG TTTTCTTCGT CGTCAGGATT ATCCGTCAAC AGAGTTCTGT | 100 |
TTCGGAATCG GAACGCTAGT CCTTGTGGTC TATCTCTTCC AATTCTCAAT | 150 |
CCGTCTCGGT CTGTACTTGT TTTTGCTCGT GGCAAGAATC GAAAAGGATT | 200 |
CGTGTCTTCG TCTTCTTCGT CTCCGAAGAA AAACAAAAAG AAAAGTTTGG | 250 |
ATGGAGCTGA TAATGGAGGA GGTGAGGAGG AGGAGGATCC ATTTGAGGCA | 300 |
TTGTTTAATC TTTTAGAAGA AGATTTGAAG AATGATAACT CGGATGATGA | 350 |
GGAGATAAGT GAGGAAGAGT TAGAGGCATT AGCCGATGAG TTAGCTCGAG | 400 |
CATTGGGTGT TGGTGACGAT GTTGATGACA TCGACTTGTT TGGTTCAGTC | 450 |
ACTGGTGATG TTGATGTTGA TGTTGATAAT GATGATGATG ATAATGATGA | 500 |
TGATGATAAT GATGATGATG ATGATGACAG CGAAGAAGAT GAAAGACCGA | 550 |
CTAAGCTGAA GAATTGGCAG CTTAAAAGAC TGGCTTATGC ATTGAAAGCT | 600 |
GGGCGTCGTA AAACTAGTAT TAAAAATCTG GCAGCTGAGG TTTGTCTTGA | 650 |
CAGGGCTTAT GTTCTTGAAT TGCTTCGTGA CCCGCCTCCA AAGCTGCTAA | 700 |
TGCTAAGTGC TACACTACCA GATGAAAAAC CGCCAGTAGC AGCACCTGAG | 750 |
AACTCCTCAC CTGATCCAAG TCCTGTGGAA TCATTATCAG CTGAAGATGT | 800 |
TGTGGTCGAA CCTAAGGAAA AAGTAAAAGA TGAAGCAGTT CATGTGATGC | 850 |
AACAGAGATG GTCTGCTCAG AAAAGAGTGA AGAAAGCTCA CATTGAAACG | 900 |
CTAGAGAAAG TTTACAGAAG ATCAAAACGA CCCACTAATG CTGTGGTTAG | 950 |
CAGCATTGTT CAAGTGACCA ATCTTCCAAG GAAGCGAGTT TTGAAGTGGT | 1000 |
TCGAAGATAA AAGAGCAGAA GACGGAGTTC CAGATAAGCG AGCTCCATAT | 1050 |
CAAGCTCCGG TTTGA | 1100 |
>AT5G11270.1 longest ORF length:354
MIKAMALSSA GVVSHLHPPS FSSSSGLSVN RVLFRNRNAS PCGLSLPILN | 50 |
PSRSVLVFAR GKNRKGFVSS SSSSPKKNKK KSLDGADNGG GEEEEDPFEA | 100 |
LFNLLEEDLK NDNSDDEEIS EEELEALADE LARALGVGDD VDDIDLFGSV | 150 |
TGDVDVDVDN DDDDNDDDDN DDDDDDSEED ERPTKLKNWQ LKRLAYALKA | 200 |
GRRKTSIKNL AAEVCLDRAY VLELLRDPPP KLLMLSATLP DEKPPVAAPE | 250 |
NSSPDPSPVE SLSAEDVVVE PKEKVKDEAV HVMQQRWSAQ KRVKKAHIET | 300 |
LEKVYRRSKR PTNAVVSSIV QVTNLPRKRV LKWFEDKRAE DGVPDKRAPY | 350 |
QAPV | 400 |
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