fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G25190 ESE3 ethylene and salt inducible 3, Integrase-type DNA-binding superfamily protein (.1)

>AT5G25190.1 genomic map

>>Show CDS map




Uncut enzymes: Acc65I, AccIII(BspMII), AclI, AfeI, AgeI, AhdI, AlwI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, BaeI, BalI, BanI, BbsI, BbvCI, BbvI, BcgI, BciVI, BglI, BglII, BlpI, BmrI, BpmI, BsaI, BsaWI, BsaXI, BseRI, BsgI, BsiWI, BsmAI, BsmBI, BsmFI, BspEI, BspMI, BspT107I(HgiCI), BsrBI, BsrFI, BssHII, BssKI, BssSI, BstAPI, BstEII, BstNI, BstZ17I, Bsu36I, BtrI, BtsI, Cfr10I, DraIII, DrdI, EaeI, EagI, EarI, EciI, EcoNI, EcoRI, FauI, FokI, FseI, FspI, HaeII, HgaI, HpaI, HpaII, HphI, I-CeuI, I-SceI, KasI, KpnI, MboII, MlyI, MnlI, MscI, MspI, NaeI, , NarI, NciI, NcoI, NgoMIV, NotI, NruI, PI-PspI, PI-SceI(VDE), PaeR7I, PflFI, PflMI, PleI, PmeI, PspGI, PspOMI, PstI, RsrII, SapI, SbfI, ScrFI, SexAI, SfaNI, SfiI, SfoI, SgrAI, SmaI, StuI, TliI, Tth111I, XhoI, XmaI, XmnI
Name Recognition sequence Cut positions
AatII GACGT|C 596
AccI GT|[AC][TG]AC 1526, 6029
AccII(FnuDII) CG|CG 1168, 1369, 4533, 5610
AciI C|CGC 3211, 4442, 4517, 4532
AflII C|TTAAG 5500
AflIII A|CPuPyGT 637, 1370, 1884, 3157, 5011
AluI AG|CT 24, 348, 789, 1284, 1952, 1956, 1960, 3311, 3488, 3684, 3948, 3972, 4368, 4421, 4682, 4706, 5121, 5233, 5323, 5650, 5680
AlwNI CAGNNN|CTG 4734
ApoI Pu|AATTPy 51, 262, 627, 1647, 1704, 3130, 3508, 3586, 3772, 3915, 4158, 4637, 5037, 5828, 6110, 6136
AseI AT|TAAT 2809, 3113, 3462, 3800
AvaI C|PyCGPuG 4364
AvaII G|G[AT]CC 530, 1358, 3870, 3881
AvrII C|CTAGG 1382
BamHI G|GATCC 3231
BanII GPuGCPy|C 4141, 4369
BclI T|GATCA 1057, 2323, 3168, 5875
BfaI C|TAG 22, 950, 1139, 1381, 1614, 1636, 1847, 1954, 1958, 2356, 2388, 3069, 4294, 4346, 4886, 5231, 5289, 5439, 5530
BsaAI PyAC|GTPu 1885, 2018, 3288, 6249
BsaBI GATNN|NNATC 2989, 4529
BsaHI GPu|CGPyC 596, 4802
BsaJI C|CNNGG 1382, 4219, 4534
BsiEI CGPuPy|CG 4222, 5582
BsiHKAI G[AT]GC[AT]|C 4369
BslI CCNNNNN|NNGG 5237
BsmI GAATGCN| 1145, 6205
BsoBI C|PyCGPuG 4364
Bsp1286I G[GAT]GC[CAT]|C 4141, 4369
BspDI AT|CGAT 1052, 4906
BspHI T|CATGA 3944
BsrDI GCAATGNN| 5712
BsrGI T|GTACA 2892
BsrI ACTGGN| 2414
BstBI TT|CGAA 244, 3681, 3751, 5383
BstF5I GGATGNN| 1731, 2246, 4320
BstUI CG|CG 1168, 1369, 4533, 5610
BstXI CCANNNNN|NTGG 1801
BstYI Pu|GATCPy 838, 3231, 6272
BtgI C|CPuPyGG 4534
Cac8I GCN|NGC 347, 933, 1955, 2574, 5560, 5795, 6208
ClaI AT|CGAT 1052, 4906
DdeI C|TNAG 351, 553, 831, 2042, 2897, 3349, 3374, 3434, 3846, 4728, 5211, 5365
DpnI GA-CH3|TC 5, 44, 179, 837, 1056, 1107, 1633, 1995, 2322, 2588, 3167, 3230, 4523, 4599, 4657, 4854, 4907, 5581, 5874, 6212, 6271, 6387
DpnII |GATC 5, 44, 179, 837, 1056, 1107, 1633, 1995, 2322, 2588, 3167, 3230, 4523, 4599, 4657, 4854, 4907, 5581, 5874, 6212, 6271, 6387
DraI TTT|AAA 11, 984, 1235, 1247, 2565, 3583, 5764, 6164
EcoO109I PuG|GNCCPy 1359, 1386, 4330
EcoRV GAT|ATC 5076
Fnu4HI GC|NGC 3214, 3742, 4322, 4343, 4684, 5207, 5725
HaeIII GG|CC 1384, 4329, 4360, 4643, 4746, 4864, 5165
HhaI GCG|C 935
HinP1I G|CGC 935
HincII GTPy|PuAC 269, 1526
HindIII A|AGCTT 3685, 4422
HinfI G|ANTC 136, 282, 522, 990, 1308, 1568, 2393, 2523, 2876, 3018, 3062, 3848, 4287, 4883, 5590, 6067, 6361
Hpy188I TCN|GA 185, 366, 1110, 1415, 1697, 1834, 2898, 3659, 3845, 4153, 4729, 4857, 4953, 5449, 5872, 6267
Hpy99I CG[AT]CG| 4336, 4803, 6427
HpyCH4III ACN|GT 1671, 1939, 2098, 2889, 3192, 3452, 3556, 3663, 4539, 4545, 4695, 5160, 5387, 6157, 6217
HpyCH4IV A|CGT 595, 1884, 2017, 3287, 4300, 5743, 6248, 6368, 6428
HpyCH4V TG|CA 65, 308, 332, 344, 543, 1145, 1664, 1796, 1921, 2246, 2750, 4320, 4628, 5140, 5347, 5598, 5707, 5712, 5723, 5792, 5796, 5924, 6004, 6205
MboI |GATC 5, 44, 179, 837, 1056, 1107, 1633, 1995, 2322, 2588, 3167, 3230, 4523, 4599, 4657, 4854, 4907, 5581, 5874, 6212, 6271, 6387
MfeI C|AATTG 2545, 4976
MluI A|CGCGT 1370
MseI T|TAA 10, 27, 249, 395, 411, 467, 629, 645, 681, 736, 858, 983, 1036, 1045, 1173, 1234, 1246, 1275, 1459, 1482, 1546, 1624, 1643, 1742, 1754, 1927, 2010, 2085, 2089, 2293, 2343, 2564, 2711, 2808, 2815, 2829, 2862, 2926, 2963, 3112, 3256, 3331, 3424, 3457, 3461, 3570, 3582, 3594, 3774, 3785, 3790, 3799, 3918, 5039, 5266, 5302, 5461, 5499, 5565, 5676, 5763, 5783, 5859, 5887, 5982, 6055, 6120, 6163, 6183, 6277
MslI CAPyNN|NNPuTG 306, 1794, 2911, 3041, 4091
MspA1I C[AC]G|C[GT]G 1285, 4312, 4534
MwoI GCNNNNN|NNGC 3739, 4118, 4319, 5649
N.BstNBI GAGTCNNNN|N 141, 1573, 3023, 3067, 3853
NdeI CA|TATG 1580, 2272, 3513, 4912
NheI G|CTAGC 1955
NlaIII CATG| 334, 386, 545, 636, 1304, 1335, 1362, 1794, 1975, 2240, 2905, 3037, 3156, 3176, 3671, 3735, 3834, 3943, 4464, 4965, 5010, 5138, 5142, 5553, 5705, 5794, 5926, 6006, 6207
NlaIV GGN|NCC 531, 1358, 3231, 3870, 4698
NsiI ATGCA|T 66, 309, 1797, 5141, 5713, 6206
NspI PuCATG|Py 335, 546, 637, 1976, 3157, 3672, 5011, 5143, 5706, 5795, 6208
PacI TTAAT|TAA 2089, 3461
PciI A|CATGT 637, 3157, 5011
PmlI CAC|GTG 1885
PpuMI PuG|G[AT]CCPy 1359
PshAI GACNN|NNGTC 136
PsiI TTA|TAA 1656, 1724, 2516, 3359, 4935, 6414
PvuI CGAT|CG 5582
PvuII CAG|CTG 1285
RsaI GT|AC 148, 290, 1844, 2126, 2171, 2891, 3189, 4373, 5700, 6010, 6430
SacI GAGCT|C 4369
SacII CCGC|GG 4534
SalI G|TCGAC 1526
Sau3AI |GATC 5, 44, 179, 837, 1056, 1107, 1633, 1995, 2322, 2588, 3167, 3230, 4523, 4599, 4657, 4854, 4907, 5581, 5874, 6212, 6271, 6387
Sau96I G|GNCC 530, 1358, 1385, 3870, 3881, 4329, 4361, 5165
ScaI AGT|ACT 149
SfcI C|TPuPyAG 486, 5990
SmlI C|TPyPuAG 5500, 6050
SnaBI TAC|GTA 3288
SpeI A|CTAGT 1848, 5440
SphI GCATG|C 5795, 6208
SspI AAT|ATT 222, 492, 669, 855, 2430, 2755, 2961, 5110, 5524, 6087, 6341
StyI C|C[AT][AT]GG 1382
SwaI ATTT|AAAT 3584
Taqƒ¿I T|CGA 35, 243, 773, 1051, 1502, 1525, 1997, 2590, 2626, 2991, 3680, 3750, 4115, 4664, 4905, 5382, 5816, 6389, 6401, 6425
TfiI G|A[AT]TC 282, 522, 1308, 2393, 4287, 4883, 5590, 6067, 6361
TseI G|C[AT]GC 3214, 3742, 4322, 4684, 5207, 5725
Tsp45I |GT[CG]AC 138, 506, 549, 598, 663, 947, 1076, 1366, 1570, 2694, 3709, 4163, 4542, 4550, 6251
Tsp509I |AATT 29, 50, 77, 98, 247, 261, 393, 626, 647, 679, 695, 720, 738, 753, 916, 1241, 1277, 1406, 1454, 1490, 1544, 1622, 1646, 1703, 1713, 1719, 2008, 2073, 2087, 2093, 2282, 2326, 2379, 2404, 2512, 2518, 2544, 2640, 2709, 2733, 2764, 2810, 2831, 3094, 3114, 3129, 3254, 3263, 3367, 3427, 3459, 3463, 3484, 3507, 3535, 3572, 3579, 3585, 3608, 3691, 3715, 3771, 3797, 3874, 3886, 3914, 4157, 4203, 4211, 4378, 4636, 4838, 4860, 4975, 5003, 5036, 5150, 5195, 5268, 5318, 5350, 5664, 5720, 5751, 5785, 5827, 5885, 5907, 5921, 6018, 6073, 6109, 6117, 6122, 6135, 6240, 6443
TspRI NNCA[CG]TGNN| 3195, 4542, 4881
XbaI T|CTAGA 1615
XcmI CCANNNNN|NNNNTGG 2682


Click here to view TAIR data

>AT5G25190 genomic sequence (4094-4176,4280-4742,) length:6458
aatcttgatc tttaaagtca aacctagctt aattcatcga aaaacgatct 
50
aaattttgag cagttatgca ttttgtggaa ttagttgcgt agtgccaaaa 
100
attagcaaca ttcaaaccat ataactgaaa tgacaagagt caccagtaag 
150
tacttgtggt tttatgtttg tgagattttt gatcttccga cataatatac 
200
aaaaaggcaa acaaacttga taatattttg ttttctttca gttttcgaaa 
250
ttaaaataac caaattttgt caacatagat tagattctct tgtaccaaga 
300
acataaaaat gcatagataa caccaaaaga tactgcatgt gtgtatgcaa 
350
gctgaggaac aatgtctctg atgaaacctc caaagtccat gttgaattaa 
400
ctccaatcca ttttaatata taatataatc atatatatat atatatatga 
450
ctaaatgttt ttatatgatt aaaactacat ttgttctata gaatattagt 
500
cttgttgtga ccttttgttg aggattcaat ggaccctcca tatttgcatg 
550
tgactgagtg tggaatggga cgagagaatg gcggtctttg atatggacgt 
600
caccttatta tttcacattt atctacaaat ttaatcacat gtatagttaa 
650
ttatattgtt tgggtcacaa tattttttgg aattaaaata agtagtaatt 
700
atctttcatt ttaccaaaac aaattacata ttttttttta atttttgtaa 
750
ctgaaattat atatatcaac aatctcgata tgaaactatt agctaatgtt 
800
tatgccctcc aatctttgta tatatatcta tcttagggga tcttattcag 
850
tcataatatt taaccgaata tgagttcaat cgtaatctat cgttgttcat 
900
tcggtatggt ttcgcctaat tttagagtta gagccagcgc aaatagtgtg 
950
actagagaaa gtcattttca atcatctatg acatttaaag gactcgtttg 
1000
acttcacaaa caagtgttgg aggaagttgt tgtttggtta atggttttaa 
1050
tatcgatgat cataaaacat aaagaagtga ccttgaatag ttactcttca 
1100
aactaactga tctgaaatgt gtatgctaac atataagtaa ctagaatgca 
1150
acgcacaaaa ctatatgttc gcggttaaaa aaaacaaaac tatatgttag 
1200
aaccgagaaa gtatatatta tatgagtgtg attatttaaa ataattttta 
1250
aaatagattg attttggtat atatagttaa tttacagctg aatgaaagaa 
1300
aaggacatga atcacaatca aaaccatttc atcacccatg tttatctatg 
1350
tcgttttggg tcccatgtca cgcgtttacg acctaggccc tactcatatt 
1400
tattcataat tcttgtctga ttttcccata actttgtatg tagtcccaaa 
1450
acactaattg ttaaatgttt tcctttttta tggttaaaga taattgtata 
1500
tattcgagtt tctcattatc tccaagtcga caaaaaaaaa aaaacaatta 
1550
agataagtta tataatatga gtcaccaaac atatgatgag cctctatgct 
1600
ataaagacaa acaatctaga cataattaac gaatgatcta gttgttaaat 
1650
tcatattata agagttgcaa aaccgtagca cattttgtgt gtgtaaatct 
1700
gacaaatttg cttcaattac aatttataag gatgatacct tgtttaatct 
1750
attttttaat gaacattgtg tatttatttt gttgttgttc attgccatgc 
1800
atttgggaga tagatattga atactttttc tctttcagag gtatggtact 
1850
agttgaaact tggaagatta gtcatcacta ctcacacgtg ccaaaatagt 
1900
agcaaagaga caaaatcctc aatgcaactt aaaataaaaa cagtctttgt 
1950
tatagctagc tagcttctca ccctcacatg ctttgctata ttgtttgatc 
2000
gaccaataca attaaaccac gtatgaaaca aagaatagtt acctaagtaa 
2050
aagcgaatat gttagacata tcaaaattat ttttgtttaa ttaaaattac 
2100
agttgtagta atgttgttat ttcaaaggta catatatatt tccattatgt 
2150
aacttgctga tattagcatt cagtaccatc cttcttttac tacaccaccg 
2200
agagagataa gttactttct tttttttcgt tttcttatgg acatggatgc 
2250
aaatatacag acaaaaaaaa gcatatgttg aataattatt agggttaaga 
2300
atgattatta gtagggtgaa aatgatcaat tatttgataa aaagttaatg 
2350
accttctcta gttgtttttc ttgtcgtcat aattgcggtc taggattctt 
2400
tcatcaattt gatactggat tgaactaata atatttggca cttgttattt 
2450
tgatgtatcc attctaccta cacactcttt tgcccaacat attcttctat 
2500
tacctcttat tccaattata attgactcta aaaggatata gtctcaattg 
2550
gagattattt tttttttaaa tatgcgtgcg actgaatatg atcgacataa 
2600
cctttacttt tatttgatga aactttgtcg aacaaaagat aaattggcaa 
2650
acaaaaacat ccatatataa acccaaataa gaagtggtta ctatgtgaca 
2700
ttccctatac aattaacata tactactatc taaaaattgt agataagttt 
2750
atgcaatatt atactaattc cctctccaag tttcagtaat gggcataatc 
2800
acatatttat taattattaa acctatgttt ttaattgaaa aataatgtat 
2850
tagagttttt tttttaatag gtcgcagact cgtaggtaaa ctgtacactc 
2900
agaaatcatg ggtatgatga caatacatta aggtttgttt caataataac 
2950
aatacaaaat aatattaaag aagggaaaag agaagatgat aatcgaagat 
3000
ggttttgggt gtttgattga gtcattatca aaggctcaca tgggtgaaga 
3050
atggtgatga aagagtctcg ctagttatca aactatatat tttccaatta 
3100
tttatcgtta ttattaatta gttggggaaa aatttggcag tatctatgat 
3150
atagagacat gttgtgatga tcaaacccat gtgaaaatag gtacagtggg 
3200
tttgaagttt caccgcagcc aaatctcttt ggatccaact tgttcacaat 
3250
gggaaaatta aaataattga taaatatata tgctatatac gtagggttgt 
3300
tattatattt agagctattt attagtttta tcttaaaaat accccataac 
3350
ttaggatatt ataactataa ttgtctaagt ataatatgtg taacttggga 
3400
caaaaggaaa agaaaaaggt ttggattaaa ttatcttagg tttgatttct 
3450
aaaccgtttt aattaattta tatttgttga taaaaaatta gcttttgtta 
3500
cagaaataaa ttcatatgaa actattgaac atttgtaatt ttgtattcta 
3550
acaaaaactg tgataagttt gttaattcat aatttaaatt ctattttaac 
3600
ttttagataa attacgataa tactttccaa aaaatatctc taaataaaaa 
3650
aaacactttt ccgacagttt agcatgtagt ttcgaagctt tcaattttca 
3700
ctataatatg tgacagaatt agataatcca tttgcccatg tcgcagcaac 
3750
ttcgaataca acaaatgaag taaatttaag aatactttaa gttaaataaa 
3800
ttaatataac tctctctctc acatcaaaca aaatccatga gattttctga 
3850
gtcgtattgg taatggtgtg ggtccaattt aggaccaaat tgattgccag 
3900
tttattgcca aagaaaattt taacacaaaa acatttctct ctctcatgaa 
3950
gctaaagcca acactactta tatagctacc cttcactctt ccaaaaacgc 
4000
tccttcactc tcatcattct ttcttctttc aaaacatttc cacaaacaca 
4050
ccaaactcac ctgaaaccct atttccattt accattcaca ctaATGGCAC 
4100
GACCACAACA ACGCTTTCGA GGCGTTAGAC AGAGGCATTG GGGCTCTTGG 
4150
GTCTCCGAAA TTCGTCACCC TCTCTTgtaa aaactctccc tcatcatcct 
4200
ctcaaattac gaaattaccc tcggtcgctt tttatttgag taatgctaaa 
4250
cttttttgtt ttttttttgt tttttttagG AAAACAAGAA TCTGGCTAGG 
4300
GACGTTTGAG ACAGCGGAGG ATGCAGCAAG GGCCTACGAC GAGGCGGCTA 
4350
GGCTAATGTG TGGCCCGAGA GCTCGTACTA ATTTCCCATA CAACCCTAAT 
4400
GCCATTCCTA CTTCCTCTTC CAAGCTTCTA TCAGCAACTC TTACCGCTAA 
4450
ACTCCACAAA TGCTACATGG CTTCTCTTCA AATGACCAAG CAAACGCAAA 
4500
CACAAACGCA AACGCAGACC GCAAGATCAC AATCCGCGGA CAGTGACGGT 
4550
GTGACGGCTA ACGAAAGTCA TTTGAACAGA GGAGTAACGG AGACGACAGA 
4600
GATCAAGTGG GAAGATGGAA ATGCGAATAT GCAACAGAAT TTTAGGCCAT 
4650
TGGAGGAAGA TCATATCGAG CAAATGATTG AGGAGCTGCT TCACTACGGT 
4700
TCCATTGAGC TTTGCTCTGT TTTACCAACT CAGACGCTGT GAgaaatggc 
4750
cttgtcgttt tagcgtattc ttttcatttt tatttttgtt tccacaaaaa 
4800
cggcgtcgta agtgatgaga gtagtagtga gagaaggcta atttcaagac 
4850
attttgatct gaattggcct cttttgaaac actgattcta gtttctataa 
4900
gagcaatcga tcatatgcta tgttatgtat agtattataa aaaaatgtta 
4950
ttttctgatt tttctccatg taaaccaatt gaacacttga aaccaaaaac 
5000
taaaaattac acatgtgttc gtgtgtgaaa aagtgggaat ttaatgtagt 
5050
gaaaagatac aacaatgaga agaaagatat ctaaagtagt gaagagagat 
5100
gagagtttga atattttgag ttagcttttg gttttgttcc atgcatgttc 
5150
taatttttca acggtgggcc ttcatttttt tatttttatt tttggtaatt 
5200
tgggattgct gctaagtaga aaaagagtgt ccctagctgt ggcttgacga 
5250
ccataaaatc caacttttta attagaggga tttgtgtttt ctagcacctt 
5300
atattaaaat agaaaaaata atttagctac ataaaatagg tgtttgactg 
5350
caattactct gtttccttag aacactctgt tcttcgaaca gtccaaacct 
5400
attatttatt tgttttgttt gtaatgcgaa taaaaggaaa ctagtgtttt 
5450
ccgaccacta ctttaacttt tgtaacaaaa tatgatttac atttactacc 
5500
ttaaggttga atacgaaaat aaaaatattc tctagcaaag aatggaaaac 
5550
ataacatgag caggctttaa tatatccttg acgatcggtt gattcttctt 
5600
gcatacatat acgcgataat ataatatcag ttgttagcaa caagccaaaa 
5650
tagctaaata atggcaattc aatatggtta aagctcgttg cgatataacc 
5700
agtacacatg caatgcatct aaattgcagc agacaaatga tttgacgtta 
5750
ggaattattt ggatttaaag attttcttgc caccttaatt atttgcatgc 
5800
aatagatgat ttatttttcg acacaataaa tttgataatc cttataggtt 
5850
tttttctttc ttaaacaaca aatctgatca ttctcaaatt aacttgctat 
5900
attactcaaa ttacaagcac aaaattgcat gaccacttat atttgataag 
5950
gtttcttttc aaatcgtgaa aaactatttt ctattaaatc tacagatgat 
6000
ttctttgcat ggtacagata atttgtttgt agacatagat ttcattattc 
6050
tcaagtttaa gatgacagaa tctcaattat ttctcaaata ttgttttgtt 
6100
atcatacata aattctacaa tttaattcca aaagtaaatt tttgaggtga 
6150
aagaaataca gtttttaaag atgttccaaa ctatttaact caaagttccg 
6200
taggaatgca tgcgatcaca gttgatttgg taacaagtgg aaattgacta 
6250
cgtgactatg tatattctcc gagatccatt aacaacaaat aaagtaaaag 
6300
aagaaaataa ccagttatat gagacaaaat gtgtcaaaac aatattattt 
6350
gatacacatt agaatctcaa cgtgatatta tttttttgga tcgaggtctc 
6400
tatcgaataa accttataat gattattcga cgtacctgtt tggaaattga 
6450
ttttgttt
6500