fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G25470 AP2/B3-like transcriptional factor family protein (.1.2)

>AT5G25470.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 216, 689
EcoRV GAT|ATC 502
SmaI CCC|GGG 136
StyI C|C[AT][AT]GG 7


Click here to view TAIR data

>AT5G25470.1 length:843
ATGTTGCCTA GGAATGCTAC TGATAAGATA CAAGGAAATG TGAGCAAGCC 
50
TTGCTTTTGG AAGTCTCTGT CTCCAGGACA AAACTGGAAA TCTAAATCCA 
100
TGAGGAGTTT TCCGGAAGAG TTTGTGAAAA GCACGCCCGG GGCTTTTGAG 
150
CACAGAGTTG TGTTCAGTGT TCGTTGGGGC AATTCTTGGC AACTCTGGCT 
200
GGAGCGAGAA GAAAAAGATC TGTTTATGAT AGAAGAAGAT TGGGATGAGT 
250
TTGTGGATGA CAACCATTTA GGCCCAAATG ATAACGTGTT CTTCAGACAC 
300
GATGACAAGA TGTTTCTTGA AGTGCAAATC TTTAAGAATG ATGGGAACGA 
350
GATCATCGAT GCACCTCCTG AAGTTGAACC TGAAACTGAA CCATTTCATC 
400
CTACTACACC AAAAAATTCT CACAAGGAGA CAACCACTGC CTCTGCCTCT 
450
GCTTCTGCTT CTGAATTTTC AGACAATTGG CGAGAGACAC ATGGTTGTGC 
500
TGATATCAAA AACCCTGAGC TGTACCTTCT AAACCCCAAA AACCCTTACT 
550
TTGTGAAAAC GCTGACAAAA GGGAATGACG TTTTGTATGT GCCCAAAACA 
600
GTGATTAAGA AGTATGGCTT GAAGTTTGGT CCCCATTTGT CCCCCATGCA 
650
TTACCTTCTT CCCGGAGATA AAATAAATGG CTCCACTAAG ATCTATGGCG 
700
GTGGCAGTGC CCCTTGTTTC AATGGCTGGG TGGACCTATG TCGAAAGTAC 
750
AATCTGAAAA CCGGAGACTC TATGGTTTGT GAACTTGAAC GCTCTGGAGA 
800
ACTGGTTACT GCTGTTAGAG TGCACTTCAT CAATAAAACA TGA
850

>AT5G25470.1 longest ORF length:280
MLPRNATDKI QGNVSKPCFW KSLSPGQNWK SKSMRSFPEE FVKSTPGAFE 
50
HRVVFSVRWG NSWQLWLERE EKDLFMIEED WDEFVDDNHL GPNDNVFFRH 
100
DDKMFLEVQI FKNDGNEIID APPEVEPETE PFHPTTPKNS HKETTTASAS 
150
ASASEFSDNW RETHGCADIK NPELYLLNPK NPYFVKTLTK GNDVLYVPKT 
200
VIKKYGLKFG PHLSPMHYLL PGDKINGSTK IYGGGSAPCF NGWVDLCRKY 
250
NLKTGDSMVC ELERSGELVT AVRVHFINKT 
300