fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G25470 AP2/B3-like transcriptional factor family protein (.1.2)

>AT5G25470.1 genomic map

>>Show CDS map




Uncut enzymes: ApaI, AscI, BamHI, HpaI, KpnI, NheI, NotI, PacI, PvuII, SacI, SalI
Name Recognition sequence Cut positions
BglII A|GATCT 2500, 4657, 4987, 5678, 6940
EcoRI G|AATTC 3285
EcoRV GAT|ATC 5385
HindIII A|AGCTT 1679, 3479, 4083, 4691, 6313
NcoI C|CATGG 1034, 2291, 4549
NdeI CA|TATG 286
PstI CTGCA|G 352
SmaI CCC|GGG 3587, 4907
SpeI A|CTAGT 5570
StyI C|C[AT][AT]GG 1034, 2291, 4458, 4549
XbaI T|CTAGA 3882
XhoI C|TCGAG 769


Click here to view TAIR data

>AT5G25470 genomic sequence (4452-4553,4874-5234,5347-5468,5575-5832,) length:7534
tctttactat caacatgact tgcttttgga tactaacagt ttttttttgg 
50
ttagGCCTTC AGAAACACTC TGGTGATGCT CGGGCTTTTT CGTTTCTCAG 
100
GATTCTTGAG CTTATACCGC ATACAACAAA GCCTCCACAA ATGTTATTTG 
150
TAGAGAATGT TGTTGGATTT GAGgtatagt gtttgcttat gcttcccagc 
200
tagagtactt gttctcgatc atcttctttg aagtcgtgac atttttgctt 
250
attggtggtg tttgttggtg cagACTTCGG ATACACATAT GGAAATGATT 
300
GGTACATTAA CAAAATTAGA TTATGTCACA CAAGAGTTTA TATTGAGTCC 
350
GCTGCAGTTT GGTGTGCCGT ATTCAAGACC ACGTTATTTC TGCCTGgtac 
400
tttctcttta ccttatgatt gcgtagtgca tatctgtgta cctaaaactg 
450
ttaattttag tagtctgaga atgtataagt atatgctgat tatgaaactt 
500
tctcatgtag tgtgcacttt ctcatgtata tgcgttaatc tttttgtttt 
550
agttaaaacg tcactaactt tgaaatcatt tgatttacct ggtgtctttg 
600
tagGCCAAAA GAAAACCTCT GCCATTTAAG TCCCAACACA GTAATAACAA 
650
ACTACTCTGG TCTCCAGACC CGTTATATGG GCGTGATGAT CAGGTTGAGT 
700
TTGGAAAATG TCAAGCAGAA GAAGGATTGG ATAAATTACT TGAGTTTTGC 
750
AAACCAGTAG AGAAGTTTCT CGAGTTAGCT GCACATGTTG ATGGCGAGCC 
800
AAGTAGTGTT GATGACTCTG AAAATGGGTC CAAAGATTGT TGTGGACAAG 
850
AAGGCGATTC TGTCCCAGAC TCTGTACATC AGTATCTAGT ACCAGTTAGT 
900
TTGATAGAGA GATGGGGAAA CGCAATGGAC ATTGTTTACC CTGATTCAAA 
950
GAGATGTTGT TGTTTCACAA AGAGTTATTA TCGATACGTG AAGGGCACAG 
1000
GTTCCCTATT GGCAACTGTC CAGgtacgtt cttccatgga gtatacaata 
1050
ttactttcct ctgtatttgc aaagtgaaaa gaaatgctta tcgtgaatct 
1100
gtgatcacgc agCCAAAAAT CAAGGGTAAG GAATCTTGTT TGAAGGAGCA 
1150
ACGGCTTAGA TACTTCACCC CTAGAGAGgt taagcactgt cctttacttt 
1200
tactactaat gcctcactga aaaagtcagc tttatttcat tgaaagatga 
1250
tgttcggttt ctatttgttt agGTAGCTAA CTTTCACTCA TTCCCTGAAG 
1300
ATTTTGAGTT CCCCAAGCAC ATAAGCCTTC GACAAAGgta cgctgttcat 
1350
accgtcaaca ccatctaagc cagaaaaagc tactgtctat atagattatg 
1400
tgcatccaag tataacagag gcaccgtttt gattcgaata tagaatttaa 
1450
cccataatac ccttatttct cccgtacttc ctgtttgaaa tgtggaaata 
1500
gttgaacaca agaacatgaa tctcatgaac tcctctttgt gcagATACGC 
1550
AATGCTTGGA AACAGTTTAA GTGTAGCAGT GGTGGCTCCT CTGCTTCGGT 
1600
ATCTATTCGA TTCTTGActa cacaatttga tgcactaagt gacgcgacca 
1650
attaccggaa tcagttattc tcctgaacaa gcttctacta cttttttgtt 
1700
tactgataaa gttcaaactg atgaacttac gttttgttat cgatccttaa 
1750
ctttatgggc cagtatttta aatgggcctt attcggcccg ttaatcataa 
1800
tttcttaccc aaatttccgt aaaaagtgac cataatattg gcatgagaca 
1850
tgagtctttt gactgtctct ctctctctct cagtcacttt aaattatttg 
1900
agcagccgca gcgagaggaa gttttcttca actgcgacgg agcgtgaagt 
1950
tcacgctccg gcggtactac ctaaggtttg tcgttaggga cgttactttt 
2000
acgttattac ttgcttcttc gccacttttc ttcatttttt ccgaccagag 
2050
atattttgtt cctccttgta cgtacaaagt gtttgttctt tttttacttt 
2100
tccaattttt tggctctaat tttatgaaca aatgcaagta ggtcatcata 
2150
caaaccctaa ttttgcagaa ctgatccagc tttgaaaaga aaaATGTTGC 
2200
CTAAGAATGC TATTGAGAAG ATCCAAGCAA ATGTGAGCAA GCCTTGCTTC 
2250
TGGAAGTCTC TCTCTCCAGG ACAAACTTGG AAATCTAAAT CCATGgtaac 
2300
ttcaattatg actcactcct cctttgatat ttactcactg ttcttagact 
2350
ctttctattg aatttgcttt gttacaagtt tatagctttg gatgttgttg 
2400
ctagaacagt aagatgtgat aatcctttca tgtttagttt agccctttta 
2450
tagacaagtt attacagaac tacccgtttg ttgttgtttg aaaaagttca 
2500
gatcttttct tcttttaaga aactttggag acattctaat ggcacaatgc 
2550
ctcctctgct tcttgctgct tggtcttcat tttgttactt attgacctgt 
2600
tttagctacc gttatgggta cttttacgtc gcaggtttcg tttgccctta 
2650
gctcatgttt atgctagtgt tggttctagt ccttttctct gcatttcttg 
2700
acctacaatc caatctttta agctcgtgtt tttgctgctt gtgttttttc 
2750
tgtagaaagt tataactttt agtctcatgt ttcctctttt gaatgtaagt 
2800
attgttttgt tgatttctgg gtttattaag AGGATAATTC CGGAAGACTT 
2850
TGTGAGAAGA ACGCGTGGTG CTTTTGAGCA CAGAGTGGTG TTTAGTGTTC 
2900
GTTGGGAAAA CTCCTGGCAA CTCTGGCTGG AGCGAGAGAA GAACGAGCTG 
2950
TTTATGATAG AAGAAGATTG GAATGAGTTT GTAGACGACA ATCATTTAGG 
3000
TCCAAATGAT AATCTGTTCA TCAAACACGA TGAGACGATG AATCTTGAAG 
3050
TGCAAATCTT TAAGAATAAT GGGGTTGAGA TCATTGATGT ACCTCTTGGA 
3100
GTTGAACCCG AAACTGAACC ATTTCATCCT ACGCCCAAGA AACCTCACAA 
3150
GGAGACAACC CCTGCCTCTT CCTTTGCCTC TGGCTCTGGC TGCTCTGgta 
3200
aggctattca gatcgataga atcatcaaac tccaaactat catttgttct 
3250
ctatgccaat gtttgattgg attctgtttt ggtggaattc tcagCAAATG 
3300
GAGGGACAAA TGGCCGAGGA AAACAACGTT CTAGTGATGT CAAAAACCCT 
3350
GAGCGATACC TCTTGAATCC TGAAAACCCT TACTTTGTGC AAGCGGTGAC 
3400
AAAAAGGAAC GACGTTCTGg taataataca agtgtttaca ttgtcagctt 
3450
tttattccat ttgtggccta gaaagctaaa gcttgtcttt gtttcctgct 
3500
gtatgtgcaa gTATGTGAGC CGACCGGTGG TTCAGAGCTA TCGCTTGAAG 
3550
TTTGGTCCCG TTAAGTCCAC CATTACCTAT CTTCTTCCCG GGGAGAAAAA 
3600
AGAGGAAGGC GAGAATAGAA TCTATAACGG GAAACCTTGT TTCAGTGGCT 
3650
GGTCGGTTCT ATGTCGGAGG CACAATCTGA ATATCGGAGA CTCCGTGGTT 
3700
TGTGAACTTG AACGCTCCGG TGGTGTGGTT ACCGCTGTAA GAGTGCATTT 
3750
CGTCAAGAAA GACTAGacca atcctctcta gtaacaacaa tatgttattt 
3800
acaactttct gtaacaatgc taaatgtgtc aattatgtgt tagtttaaca 
3850
aacttgtcaa ttcacttgca atcgaatcga ttctagagta tgatgggcca 
3900
gtttctaata tgggccatat ccggcccaat aatattgttt gaccatttta 
3950
ttatttccat acacagtaca catttgacac ttgtcacagt gctgttgact 
4000
gttgagtctc ctctctttct gaaagcagag agattcgatt tggagaacaa 
4050
gggctgagaa gagcagacac agcagcgaga ggaagcttct tcgactgcga 
4100
cggtgcgtga atttcatgct ccggcgacgt tacttttgac gcaattactt 
4150
gccttttacg catttacttt gttctgactt ctgacctaag tttttttccc 
4200
ctttgaccgt acaaattttg cttctttctt cgtttttctc tgtgtctctc 
4250
attagtcacc attttcgtgt tctctgcttt gtaacacttt cgggtttagc 
4300
tactgaaagt aagaaaagcg agataacgca ttaaaggttt aatttttatc 
4350
cagttttact gtttcactga tttcattaca tgcaagtcat cttcgtcttt 
4400
gtttatgaac cctaattttg ccgaatccat ccagcttttg aagagaacaa 
4450
gATGTTGCCT AGGAATGCTA CTGATAAGAT ACAAGGAAAT GTGAGCAAGC 
4500
CTTGCTTTTG GAAGTCTCTG TCTCCAGGAC AAAACTGGAA ATCTAAATCC 
4550
ATGgtaaaac aaaattagtc tctcttcttt tctaatcttt cgaaaatgta 
4600
gctcctttga ttttgtactc actgttattt ccattgaact tctttgtttg 
4650
ctctaaagat ctattgttcg tttgttgttc ttgttcgaaa aagcttttga 
4700
tctttcaaga aacatttgag gagattttaa tggcacaatg attcctgctt 
4750
cttgttctgc ttgacaagct cgtgttctgc tgattgtatt ttagctttta 
4800
gtctcatgtt tccttcttct aatgtcagta tcgtttgttg ttgtcaactg 
4850
ttatgatttc tgtctttatg aagAGGAGTT TTCCGGAAGA GTTTGTGAAA 
4900
AGCACGCCCG GGGCTTTTGA GCACAGAGTT GTGTTCAGTG TTCGTTGGGG 
4950
CAATTCTTGG CAACTCTGGC TGGAGCGAGA AGAAAAAGAT CTGTTTATGA 
5000
TAGAAGAAGA TTGGGATGAG TTTGTGGATG ACAACCATTT AGGCCCAAAT 
5050
GATAACGTGT TCTTCAGACA CGATGACAAG ATGTTTCTTG AAGTGCAAAT 
5100
CTTTAAGAAT GATGGGAACG AGATCATCGA TGCACCTCCT GAAGTTGAAC 
5150
CTGAAACTGA ACCATTTCAT CCTACTACAC CAAAAAATTC TCACAAGGAG 
5200
ACAACCACTG CCTCTGCCTC TGCTTCTGCT TCTGgtatgg ctatattcag 
5250
aatgaaagaa tcgttttgat gctcttcata ctcaatacta ctcttttctt 
5300
ttctctcaat gccaaagttt gcttcttttt gtttctgttt tggcagAATT 
5350
TTCAGACAAT TGGCGAGAGA CACATGGTTG TGCTGATATC AAAAACCCTG 
5400
AGCTGTACCT TCTAAACCCC AAAAACCCTT ACTTTGTGAA AACGCTGACA 
5450
AAAGGGAATG ACGTTTTGgt aataagagca gtgttttcat cagttttgat 
5500
tctagtttac gtttgttgcc tctaaatcta agacttatct ttctctctat 
5550
ttctcatgta caatgtgcaa ctagTATGTG CCCAAAACAG TGATTAAGAA 
5600
GTATGGCTTG AAGTTTGGTC CCCATTTGTC CCCCATGCAT TACCTTCTTC 
5650
CCGGAGATAA AATAAATGGC TCCACTAAGA TCTATGGCGG TGGCAGTGCC 
5700
CCTTGTTTCA ATGGCTGGGT GGACCTATGT CGAAAGTACA ATCTGAAAAC 
5750
CGGAGACTCT ATGGTTTGTG AACTTGAACG CTCTGGAGAA CTGGTTACTG 
5800
CTGTTAGAGT GCACTTCATC AATAAAACAT GAgatgagtc ctctctagtc 
5850
tcttttcttt aacattcgtg tttaccaaac ttactattgt aatgtttata 
5900
tgtgaccctt atgttgcttt aacaaaactt aaatgctaaa tttcttatgc 
5950
ttctgttact tcattggaaa tgctcgattg tgattcagtc ttatatgctc 
6000
gtgagaagta aaatatgcat acaactttat tgtaagtttt gtaactcttc 
6050
cataaaaatt aaaaggccta gatacataag atataggcaa cgtttctttt 
6100
gccttctcat acaagaaaat acaatataag caaaggccca tctgcctata 
6150
taaaacccta actctcgtaa ataaaactct gtttttttca ccttctcgtt 
6200
tcaataaaat ccaacacaca ccaaagacag tttaaggaaa ataaaagaag 
6250
accacacgat gcattttctt gtaataggat tggtgattca tCTATGGTTT 
6300
ACGAACGCTT ATAAGCTTGA CATCATCGAT CACAGGCCCA CACAATGACG 
6350
AGAAATCATC GCTCCTCATG GCATAGAAAG TGCTGTAGAA CATAATTCTT 
6400
GATCGGGTCG AAACCGCCAC AAATCGAATA GAAGCTCGTT TAAACCCTCC 
6450
TGTGCCTTTC GACTCGTAAG GGACCTTAAG TGTATCTTTT CCTGCAAAAG 
6500
CCTCAACCAC CATTGATCCT TTGCAAGCAT TGTTGGCGTC TCCAACCGCA 
6550
AAAGACAGCA CGTAAGTCTT CCCAATGACA GTCCGAACCA CTTGAGCGAT 
6600
GGCACTCTCT TTACCCGCTA CAAGCTCAAT AGCTCTGCGA CCCTGTGGGA 
6650
CTGAGAAATG TTCAACGTCT ACGTACTTGA CAGCTTTGAG AGACTCCACC 
6700
ATCCATCCAG GTAAAGGAGA GTGGTCGTCT TCTATAAACG GTGGGATCAA 
6750
AACTCCAGTT GTCGAGCCGG GTAATACTAA TGGACCTTCT TCAAATCCTC 
6800
CGTTTTTCAA AATGTTCTct gccaaatcaa acataaaaga aaatcatcat 
6850
tattcacatg ttcaaggatt ataaaaacag agcaagaaac agagtattta 
6900
tagtaatgac ttacTATTAG TTGGTCTAGG AGGGTAAAGA GATCTCATAG 
6950
CAACACCATC AATAAGTGGA CCACAAGCTG GATCTTCCTC AACACCAGGA 
7000
TTATGAATCA CAACTTCAGC AACATCACTC TCAGCTTGAA ACGCCCAAGC 
7050
ATATAAATCC CAACCACTAC TACTATAAAC CGTCTGAATC GGAATCACAC 
7100
CGGAGTCAGG TGCTACAGAT ATGTTAAGTC TCTCGTCTTG TGCACAAGTT 
7150
CTAGCAGCAC TAAAAGTGAG TGAGTAATAC ATTCCTTTAA CCACTTTAAG 
7200
TCTTTGTTTG ATCGATGCTT CGTTCCCAAG TCTTACAGCG AATTTACCGG 
7250
CGGGAACAAC GAGAAGCATG TCTCCTTGTT TATGTCCTGA TTTAATGTAT 
7300
TCGACGAATC CTGTGACTTC CCAGTTTGGT ATTGCTAGTT TGTTTAGTAT 
7350
TTCTGTTCCT TTCATGTCTG ATGGTTTTGG TCCTAGCTCG AAGTCTCCGT 
7400
TTGGTAACAT GCctgtggat attatcaaaa tgtccttgtg aatattagga 
7450
attttggaat ttttttaaaa gaaaaagata tacatagagc acgtgaggtg 
7500
tgtccgaaga cagcctaaac tggtcctaaa tgta
7550