fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G25475 AP2/B3-like transcriptional factor family protein (.1.2.3.4)

>AT5G25475.2 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
SmaI CCC|GGG 670


Click here to view TAIR data

>AT5G25475.2 length:849
ATGTTGCCTA AGAATGCTAT TGAGAAGATC CAAGCAAATG TGAGCAAGCC 
50
TTGCTTCTGG AAGTCTCTCT CTCCAGGACA AACTTGGAAA TCTAAATCCA 
100
TGAGGATAAT TCCGGAAGAC TTTGTGAGAA GAACGCGTGG TGCTTTTGAG 
150
CACAGAGTGG TGTTTAGTGT TCGTTGGGAA AACTCCTGGC AACTCTGGCT 
200
GGAGCGAGAG AAGAACGAGC TGTTTATGAT AGAAGAAGAT TGGAATGAGT 
250
TTGTAGACGA CAATCATTTA GGTCCAAATG ATAATCTGTT CATCAAACAC 
300
GATGAGACGA TGAATCTTGA AGTGCAAATC TTTAAGAATA ATGGGGTTGA 
350
GATCATTGAT GTACCTCTTG GAGTTGAACC CGAAACTGAA CCATTTCATC 
400
CTACGCCCAA GAAACCTCAC AAGGAGACAA CCCCTGCCTC TTCCTTTGCC 
450
TCTGGCTCTG GCTGCTCTGC AAATGGAGGG ACAAATGGCC GAGGAAAACA 
500
ACGTTCTAGT GATGTCAAAA ACCCTGAGCG ATACCTCTTG AATCCTGAAA 
550
ACCCTTACTT TGTGCAAGCG GTGACAAAAA GGAACGACGT TCTGTATGTG 
600
AGCCGACCGG TGGTTCAGAG CTATCGCTTG AAGTTTGGTC CCGTTAAGTC 
650
CACCATTACC TATCTTCTTC CCGGGGAGAA AAAAGAGGAA GGCGAGAATA 
700
GAATCTATAA CGGGAAACCT TGTTTCAGTG GCTGGTCGGT TCTATGTCGG 
750
AGGCACAATC TGAATATCGG AGACTCCGTG GTTTGTGAAC TTGAACGCTC 
800
CGGTGGTGTG GTTACCGCTG TAAGAGTGCA TTTCGTCAAG AAAGACTAG
850

>AT5G25475.2 longest ORF length:282
MLPKNAIEKI QANVSKPCFW KSLSPGQTWK SKSMRIIPED FVRRTRGAFE 
50
HRVVFSVRWE NSWQLWLERE KNELFMIEED WNEFVDDNHL GPNDNLFIKH 
100
DETMNLEVQI FKNNGVEIID VPLGVEPETE PFHPTPKKPH KETTPASSFA 
150
SGSGCSANGG TNGRGKQRSS DVKNPERYLL NPENPYFVQA VTKRNDVLYV 
200
SRPVVQSYRL KFGPVKSTIT YLLPGEKKEE GENRIYNGKP CFSGWSVLCR 
250
RHNLNIGDSV VCELERSGGV VTAVRVHFVK KD
300