fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G25475 AP2/B3-like transcriptional factor family protein (.1.2.3.4)

>AT5G25475.2 genomic map

>>Show CDS map




Uncut enzymes: ApaI, AscI, BamHI, EcoRV, KpnI, NheI, NotI, PacI, PvuII, SacI, SalI, SpeI
Name Recognition sequence Cut positions
BglII A|GATCT 4636, 6793, 7123
EcoRI G|AATTC 602, 5421
HindIII A|AGCTT 396, 1830, 3815, 5615, 6219, 6827
HpaI GTT|AAC 683, 1336
NcoI C|CATGG 1662, 3170, 4427, 6685
NdeI CA|TATG 817, 853, 2422
PstI CTGCA|G 2488
SmaI CCC|GGG 656, 5723, 7043
StyI C|C[AT][AT]GG 1662, 3170, 4427, 6594, 6685
XbaI T|CTAGA 75, 496, 932, 6018
XhoI C|TCGAG 1674, 2905


Click here to view TAIR data

>AT5G25475 genomic sequence (4330-4431,4967-5333,5431-5555,5648-5902,) length:7524
gattttatct gataaaattg ctgaatgatt caagaaataa ttcaggatgc 
50
gacagttttg tgtgagtatc ggtttctaga agatttgaga agagcgtgtt 
100
tagaggatga atcaaaaaag aaaaaggact taaagagatt tggaagactt 
150
gatgaaagtg gagtttgatg agaaaaagga taagagtaaa tttacttttt 
200
cttatggaaa aaggaaatct tctcctatgg tgattaggaa atcgttttgg 
250
ctacataagg aggaggtagg acgtcttgga gaggcaggag agctgagaca 
300
taaagacaaa tcattgagag ctttctaagg gtgtgtgcga catagtttca 
350
cggttttatg cgacatagtt tcgcgggttt ggtgcttgtg tgatcaagct 
400
tgtttgttgg tgcgtgaagg ttattccaga gacttggaga attgaagtct 
450
aggctcagaa ggagtttaac tcagggttag gttatcctga ttaaatctag 
500
actcagggga gtttagttaa gggtagagat tatccttaag gtttcacgtt 
550
tatagaaggg agcggtaaat caagaggggt gtgcttgttt tacgcgtttg 
600
cgaattcatt gtaatttgct ttcttgttct agtgaaatcg aaatctggac 
650
gtggtcccgg ggagtaggaa aaaccgaacc tcgttaacaa atttcttatc 
700
tctttacttt ctgcacttta ttattacctc atccgcactt acataagtag 
750
taatcaaaaa tctcaactaa tacgatggcg accgaaatgt ttttagaaag 
800
ttaatttatc tacttacata tgatcaataa tgcaagagta attaattcct 
850
cgcatatgaa tggagatcaa atagatagtg tttgtaggtt ccgtgttcgc 
900
gtatcgaaat aaaaaaatca attcctaaat ttctagattg tagtttgggt 
950
ctttctcaat tttattgtaa atcaactttg tacctcactc taactatgaa 
1000
ttacttataa aatatttcta tcaatccttt tcaatctcac taaaaccatc 
1050
caaacaaacc tacgtggaat caaagttcat atagtatgaa catgaagaac 
1100
actagaaggt ccaaagattc agcctagatc aatgttagct agagtctttt 
1150
ttgtttgttt gttaatttgt tgattgttag ctaattttat atccccatga 
1200
aatgaaagat tagacataaa aaacccacaa catactttca cacatactaa 
1250
aaagcaaagt gtttgatatg ccatgtaatt ccccaaaata acatatcctt 
1300
aaccttaata tataaaacag tggtaactaa aattggttaa cgaaaaaaaa 
1350
aacaaaaatt ggttaaggat tgttttttat tttttgtaag ttgagggtta 
1400
ttttgaaaca tattggctag tttgagggtt ttcttgctaa ttaataaaga 
1450
aaaacgacaa aaaacaaaaa acatggttct aacaataaac cgaacaagcg 
1500
tggtatggtt ctattactaa acagaacaat ataaaaaaac ggtttaattt 
1550
acccaaacga ataagaacaa taaccaaaaa ctcccaaatt aattttgctt 
1600
aagcagcagc agaagaagaa gcATGGCGGA ACAAGAATTA CAGAGAATCA 
1650
ATGAGAAGAA GCCATGGCAA GTTCTCGAGT TCTACAGTGG AATCGGTGGA 
1700
ATGgtaacag tctccttcac ctccaattct atgtttttag tgaagtctac 
1750
tctgtctcat aaaccctaat tcctttttgc tcttagAGAT ACTCTTTAAT 
1800
GGCGTCAGGC ATCGTCTCAG AAGTAGTAGA AGCTTTTGAG ATCAATGATT 
1850
CTGCTAATGA TGTTTATCAA CATAATTTCA AACATCGTCC CTATCAGgtt 
1900
gcttaatgct tatatatgat ataatcaata gaagcattgt tacatttgca 
1950
aatcatagat gatgctagtt ctgtgactta gtccatgatt agttcttatt 
2000
gttttggttg tttttcatag GGGAATATTC AGAGTCTCAC TGCTGCTGAT 
2050
TTAGATAAGT ATAATGCAGA TGCTTGGCTT CTTTCTCCTC CTTGTCAACC 
2100
TTATACTAGA CAAGgtgatt catttcactg ttgttttctt tactatcaac 
2150
atgacttgct tttggatact aacagttttt ttttggttag GCCTTCAGAA 
2200
ACACTCTGGT GATGCTCGGG CTTTTTCGTT TCTCAGGATT CTTGAGCTTA 
2250
TACCGCATAC AACAAAGCCT CCACAAATGT TATTTGTAGA GAATGTTGTT 
2300
GGATTTGAGg tatagtgttt gcttatgctt cccagctaga gtacttgttc 
2350
tcgatcatct tctttgaagt cgtgacattt ttgcttattg gtggtgtttg 
2400
ttggtgcagA CTTCGGATAC ACATATGGAA ATGATTGGTA CATTAACAAA 
2450
ATTAGATTAT GTCACACAAG AGTTTATATT GAGTCCGCTG CAGTTTGGTG 
2500
TGCCGTATTC AAGACCACGT TATTTCTGCC TGgtactttc tctttacctt 
2550
atgattgcgt agtgcatatc tgtgtaccta aaactgttaa ttttagtagt 
2600
ctgagaatgt ataagtatat gctgattatg aaactttctc atgtagtgtg 
2650
cactttctca tgtatatgcg ttaatctttt tgttttagtt aaaacgtcac 
2700
taactttgaa atcatttgat ttacctggtg tctttgtagG CCAAAAGAAA 
2750
ACCTCTGCCA TTTAAGTCCC AACACAGTAA TAACAAACTA CTCTGGTCTC 
2800
CAGACCCGTT ATATGGGCGT GATGATCAGG TTGAGTTTGG AAAATGTCAA 
2850
GCAGAAGAAG GATTGGATAA ATTACTTGAG TTTTGCAAAC CAGTAGAGAA 
2900
GTTTCTCGAG TTAGCTGCAC ATGTTGATGG CGAGCCAAGT AGTGTTGATG 
2950
ACTCTGAAAA TGGGTCCAAA GATTGTTGTG GACAAGAAGG CGATTCTGTC 
3000
CCAGACTCTG TACATCAGTA TCTAGTACCA GTTAGTTTGA TAGAGAGATG 
3050
GGGAAACGCA ATGGACATTG TTTACCCTGA TTCAAAGAGA TGTTGTTGTT 
3100
TCACAAAGAG TTATTATCGA TACGTGAAGG GCACAGGTTC CCTATTGGCA 
3150
ACTGTCCAGg tacgttcttc catggagtat acaatattac tttcctctgt 
3200
atttgcaaag tgaaaagaaa tgcttatcgt gaatctgtga tcacgcagCC 
3250
AAAAATCAAG GGTAAGGAAT CTTGTTTGAA GGAGCAACGG CTTAGATACT 
3300
TCACCCCTAG AGAGgttaag cactgtcctt tacttttact actaatgcct 
3350
cactgaaaaa gtcagcttta tttcattgaa agatgatgtt cggtttctat 
3400
ttgtttagGT AGCTAACTTT CACTCATTCC CTGAAGATTT TGAGTTCCCC 
3450
AAGCACATAA GCCTTCGACA AAGgtacgct gttcataccg tcaacaccat 
3500
ctaagccaga aaaagctact gtctatatag attatgtgca tccaagtata 
3550
acagaggcac cgttttgatt cgaatataga atttaaccca taataccctt 
3600
atttctcccg tacttcctgt ttgaaatgtg gaaatagttg aacacaagaa 
3650
catgaatctc atgaactcct ctttgtgcag ATACGCAATG CTTGGAAACA 
3700
GTTTAAGTGT AGCAGTGGTG GCTCCTCTGC TTCGGTATCT ATTCGATTCT 
3750
TGActacaca atttgatgca ctaagtgacg cgaccaatta ccggaatcag 
3800
ttattctcct gaacaagctt ctactacttt tttgtttact gataaagttc 
3850
aaactgatga acttacgttt tgttatcgat ccttaacttt atgggccagt 
3900
attttaaatg ggccttattc ggcccgttaa tcataatttc ttacccaaat 
3950
ttccgtaaaa agtgaccata atattggcat gagacatgag tcttttgact 
4000
gtctctctct ctctctcagt cactttaaat tatttgagca gccgcagcga 
4050
gaggaagttt tcttcaactg cgacggagcg tgaagttcac gctccggcgg 
4100
tactacctaa ggtttgtcgt tagggacgtt acttttacgt tattacttgc 
4150
ttcttcgcca cttttcttca ttttttccga ccagagatat tttgttcctc 
4200
cttgtacgta caaagtgttt gttctttttt tacttttcca attttttggc 
4250
tctaatttta tgaacaaatg caagtaggtc atcatacaaa ccctaatttt 
4300
gcagaactga tccagctttg aaaagaaaaA TGTTGCCTAA GAATGCTATT 
4350
GAGAAGATCC AAGCAAATGT GAGCAAGCCT TGCTTCTGGA AGTCTCTCTC 
4400
TCCAGGACAA ACTTGGAAAT CTAAATCCAT Ggtaacttca attatgactc 
4450
actcctcctt tgatatttac tcactgttct tagactcttt ctattgaatt 
4500
tgctttgtta caagtttata gctttggatg ttgttgctag aacagtaaga 
4550
tgtgataatc ctttcatgtt tagtttagcc cttttataga caagttatta 
4600
cagaactacc cgtttgttgt tgtttgaaaa agttcagatc ttttcttctt 
4650
ttaagaaact ttggagacat tctaatggca caatgcctcc tctgcttctt 
4700
gctgcttggt cttcattttg ttacttattg acctgtttta gctaccgtta 
4750
tgggtacttt tacgtcgcag gtttcgtttg cccttagctc atgtttatgc 
4800
tagtgttggt tctagtcctt ttctctgcat ttcttgacct acaatccaat 
4850
cttttaagct cgtgtttttg ctgcttgtgt tttttctgta gaaagttata 
4900
acttttagtc tcatgtttcc tcttttgaat gtaagtattg ttttgttgat 
4950
ttctgggttt attaagAGGA TAATTCCGGA AGACTTTGTG AGAAGAACGC 
5000
GTGGTGCTTT TGAGCACAGA GTGGTGTTTA GTGTTCGTTG GGAAAACTCC 
5050
TGGCAACTCT GGCTGGAGCG AGAGAAGAAC GAGCTGTTTA TGATAGAAGA 
5100
AGATTGGAAT GAGTTTGTAG ACGACAATCA TTTAGGTCCA AATGATAATC 
5150
TGTTCATCAA ACACGATGAG ACGATGAATC TTGAAGTGCA AATCTTTAAG 
5200
AATAATGGGG TTGAGATCAT TGATGTACCT CTTGGAGTTG AACCCGAAAC 
5250
TGAACCATTT CATCCTACGC CCAAGAAACC TCACAAGGAG ACAACCCCTG 
5300
CCTCTTCCTT TGCCTCTGGC TCTGGCTGCT CTGgtaaggc tattcagatc 
5350
gatagaatca tcaaactcca aactatcatt tgttctctat gccaatgttt 
5400
gattggattc tgttttggtg gaattctcag CAAATGGAGG GACAAATGGC 
5450
CGAGGAAAAC AACGTTCTAG TGATGTCAAA AACCCTGAGC GATACCTCTT 
5500
GAATCCTGAA AACCCTTACT TTGTGCAAGC GGTGACAAAA AGGAACGACG 
5550
TTCTGgtaat aatacaagtg tttacattgt cagcttttta ttccatttgt 
5600
ggcctagaaa gctaaagctt gtctttgttt cctgctgtat gtgcaagTAT 
5650
GTGAGCCGAC CGGTGGTTCA GAGCTATCGC TTGAAGTTTG GTCCCGTTAA 
5700
GTCCACCATT ACCTATCTTC TTCCCGGGGA GAAAAAAGAG GAAGGCGAGA 
5750
ATAGAATCTA TAACGGGAAA CCTTGTTTCA GTGGCTGGTC GGTTCTATGT 
5800
CGGAGGCACA ATCTGAATAT CGGAGACTCC GTGGTTTGTG AACTTGAACG 
5850
CTCCGGTGGT GTGGTTACCG CTGTAAGAGT GCATTTCGTC AAGAAAGACT 
5900
AGaccaatcc tctctagtaa caacaatatg ttatttacaa ctttctgtaa 
5950
caatgctaaa tgtgtcaatt atgtgttagt ttaacaaact tgtcaattca 
6000
cttgcaatcg aatcgattct agagtatgat gggccagttt ctaatatggg 
6050
ccatatccgg cccaataata ttgtttgacc attttattat ttccatacac 
6100
agtacacatt tgacacttgt cacagtgctg ttgactgttg agtctcctct 
6150
ctttctgaaa gcagagagat tcgatttgga gaacaagggc tgagaagagc 
6200
agacacagca gcgagaggaa gcttcttcga ctgcgacggt gcgtgaattt 
6250
catgctccgg cgacgttact tttgacgcaa ttacttgcct tttacgcatt 
6300
tactttgttc tgacttctga cctaagtttt tttccccttt gaccgtacaa 
6350
attttgcttc tttcttcgtt tttctctgtg tctctcatta gtcaccattt 
6400
tcgtgttctc tgctttgtaa cactttcggg tttagctact gaaagtaaga 
6450
aaagcgagat aacgcattaa aggtttaatt tttatccagt tttactgttt 
6500
cactgatttc attacatgca agtcatcttc gtctttgttt atgaacccta 
6550
attttgccga atccatccag cttttgaaga gaacaagATG TTGCCTAGGA 
6600
ATGCTACTGA TAAGATACAA GGAAATGTGA GCAAGCCTTG CTTTTGGAAG 
6650
TCTCTGTCTC CAGGACAAAA CTGGAAATCT AAATCCATGg taaaacaaaa 
6700
ttagtctctc ttcttttcta atctttcgaa aatgtagctc ctttgatttt 
6750
gtactcactg ttatttccat tgaacttctt tgtttgctct aaagatctat 
6800
tgttcgtttg ttgttcttgt tcgaaaaagc ttttgatctt tcaagaaaca 
6850
tttgaggaga ttttaatggc acaatgattc ctgcttcttg ttctgcttga 
6900
caagctcgtg ttctgctgat tgtattttag cttttagtct catgtttcct 
6950
tcttctaatg tcagtatcgt ttgttgttgt caactgttat gatttctgtc 
7000
tttatgaagA GGAGTTTTCC GGAAGAGTTT GTGAAAAGCA CGCCCGGGGC 
7050
TTTTGAGCAC AGAGTTGTGT TCAGTGTTCG TTGGGGCAAT TCTTGGCAAC 
7100
TCTGGCTGGA GCGAGAAGAA AAAGATCTGT TTATGATAGA AGAAGATTGG 
7150
GATGAGTTTG TGGATGACAA CCATTTAGGC CCAAATGATA ACGTGTTCTT 
7200
CAGACACGAT GACAAGATGT TTCTTGAAGT GCAAATCTTT AAGAATGATG 
7250
GGAACGAGAT CATCGATGCA CCTCCTGAAG TTGAACCTGA AACTGAACCA 
7300
TTTCATCCTA CTACACCAAA AAATTCTCAC AAGGAGACAA CCACTGCCTC 
7350
TGCCTCTGCT TCTGCTTCTG gtatggctat attcagaatg aaagaatcgt 
7400
tttgatgctc ttcatactca atactactct tttcttttct ctcaatgcca 
7450
aagtttgctt ctttttgttt ctgttttggc agAATTTTCA GACAATTGGC 
7500
GAGAGACACA TGGTTGTGCT GATA
7550