Locus |
Common name |
Short description |
AT5G38860 |
bHLH141, BIM3 |
BES1-interacting Myc-like protein 3 (.1) |
>AT5G38860.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
EcoRV
| GAT|ATC |
13, 726 |
HindIII
| A|AGCTT |
212, 381, 849 |
HpaI
| GTT|AAC |
612, 706 |
PstI
| CTGCA|G |
538 |
StyI
| C|C[AT][AT]GG |
322 |
Click here to view TAIR data
>AT5G38860.1 length:897
ATGAACTCTC ATGATATCGA TGATCAGTTA GAAGCAGATG TATACAGTAA | 50 |
CTTGCCTTCT CGAAATGATT CTTCAACAGG GAGGAGAAAT CGAAACTCGT | 100 |
GTAGATCGAA ACACTCAGAG ACTGAGCAAC GAAGAAGAAG CAAAATCAAT | 150 |
GAAAGATTTC AGAGTTTAAT GGATATTATA CCTCAGAATC AGAATGATCA | 200 |
GAAACGAGAT AAAGCTTCTT TCTTGTTGGA GGTTATAGAG TATATTCACT | 250 |
TTCTTCAAGA AAAAGTTCAC ATGTATGAAG ATTCTCACCA AATGTGGTAT | 300 |
CAATCCCCAA CCAAATTGAT TCCTTGGAGA AATAGTCATG GGTCTGTTGC | 350 |
GGAGGAAAAT GACCATCCTC AAATCGTTAA AAGCTTTTCA AGTAATGATA | 400 |
AAGTTGCTGC TTCTTCGGGT TTTCTCTTGG ATACGTACAA TTCAGTAAAT | 450 |
CCTGATATTG ACTCAGCAGT TAGCACCAAG ATTCCTGAAC ACAGTCCTGT | 500 |
TTCAGCAGTT TCATCGTATC TACGTACCGA GCCTTCGCTG CAGTTTGTTC | 550 |
AGCATGACTT TTGGCAACCA AAAACAAGTT GTGGAACAAT TAACTGTTTT | 600 |
ACAAATGAAT TGTTAACATC TGACGAAAAA ACATCAGCCA GCTTGTCCAC | 650 |
TGTCTGCTCA CAAAGGGTAC TTAACACTCT AACTGAAGCA CTTAAGTCAT | 700 |
CGGGTGTTAA CATGTCAGAG ACCATGATAT CTGTGCAGTT AAGCCTTCGG | 750 |
AAAAGAGAAG ATCGCGAGTA TTCTGTTGCT GCGTTTGCTT CTGAGGATAA | 800 |
TGGTAATAGC ATCGCTGATG AAGAAGGGGA CTCTCCTACT GAAACTAGAA | 850 |
GCTTCTGCAA TGATATTGAT CATTCCCAGA AGAGAATAAG ACGATAA | 900 |
>AT5G38860.1 longest ORF length:298
MNSHDIDDQL EADVYSNLPS RNDSSTGRRN RNSCRSKHSE TEQRRRSKIN | 50 |
ERFQSLMDII PQNQNDQKRD KASFLLEVIE YIHFLQEKVH MYEDSHQMWY | 100 |
QSPTKLIPWR NSHGSVAEEN DHPQIVKSFS SNDKVAASSG FLLDTYNSVN | 150 |
PDIDSAVSTK IPEHSPVSAV SSYLRTEPSL QFVQHDFWQP KTSCGTINCF | 200 |
TNELLTSDEK TSASLSTVCS QRVLNTLTEA LKSSGVNMSE TMISVQLSLR | 250 |
KREDREYSVA AFASEDNGNS IADEEGDSPT ETRSFCNDID HSQKRIRR | 300 |
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