fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G39860 BNQ1, BHLH136, PRE1 PACLOBUTRAZOL RESISTANCE1, BANQUO 1, BASIC HELIX-LOOP-HELIX PROTEIN 136, basic helix-loop-helix (bHLH) DNA-binding family protein (.1)

>AT5G39860.1 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
StyI C|C[AT][AT]GG 37


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>AT5G39860.1 length:279
ATGTCGAACA GAAGATCAAG GCAATCTTCA AGTGCTCCAA GGATCTCCGA 
50
TAATCAAATG ATTGACCTCG TATCTAAGCT CCGTCAAATT TTGCCGGAGA 
100
TTGGTCAACG ACGTCGTTCT GATAAGGCAT CAGCCTCGAA AGTATTGCAA 
150
GAGACATGCA ATTACATACG AAATTTGAAC AGAGAAGTTG ACAATCTGAG 
200
CGAGCGTTTG TCTCAGCTTC TCGAATCTGT CGATGAAGAT AGCCCTGAAG 
250
CCGCCGTTAT TAGAAGCCTA CTCATGTAA
300

>AT5G39860.1 longest ORF length:92
MSNRRSRQSS SAPRISDNQM IDLVSKLRQI LPEIGQRRRS DKASASKVLQ 
50
ETCNYIRNLN REVDNLSERL SQLLESVDED SPEAAVIRSL LM
100