Locus |
Common name |
Short description |
AT5G39860 |
BNQ1, BHLH136, PRE1 |
PACLOBUTRAZOL RESISTANCE1, BANQUO 1, BASIC HELIX-LOOP-HELIX PROTEIN 136, basic helix-loop-helix (bHLH) DNA-binding family protein (.1) |
>AT5G39860.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
StyI
| C|C[AT][AT]GG |
37 |
Click here to view TAIR data
>AT5G39860.1 length:279
ATGTCGAACA GAAGATCAAG GCAATCTTCA AGTGCTCCAA GGATCTCCGA | 50 |
TAATCAAATG ATTGACCTCG TATCTAAGCT CCGTCAAATT TTGCCGGAGA | 100 |
TTGGTCAACG ACGTCGTTCT GATAAGGCAT CAGCCTCGAA AGTATTGCAA | 150 |
GAGACATGCA ATTACATACG AAATTTGAAC AGAGAAGTTG ACAATCTGAG | 200 |
CGAGCGTTTG TCTCAGCTTC TCGAATCTGT CGATGAAGAT AGCCCTGAAG | 250 |
CCGCCGTTAT TAGAAGCCTA CTCATGTAA | 300 |
>AT5G39860.1 longest ORF length:92
MSNRRSRQSS SAPRISDNQM IDLVSKLRQI LPEIGQRRRS DKASASKVLQ | 50 |
ETCNYIRNLN REVDNLSERL SQLLESVDED SPEAAVIRSL LM | 100 |
|