fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G40330 ATMYBRTF, ATMYB23 myb domain protein 23 (.1)

>AT5G40330.1 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HindIII, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 225, 446
HpaI GTT|AAC 193
SpeI A|CTAGT 522


Click here to view TAIR data

>AT5G40330.1 length:660
ATGAGAATGA CAAGAGATGG AAAAGAACAT GAATACAAGA AAGGTTTATG 
50
GACAGTGGAA GAAGACAAGA TCCTCATGGA TTATGTCCGA ACTCATGGCC 
100
AGGGCCACTG GAACCGCATC GCCAAGAAAA CTGGGCTCAA GAGATGTGGG 
150
AAAAGCTGTA GGTTGAGATG GATGAACTAC TTAAGCCCTA ATGTTAACAG 
200
AGGCAATTTT ACTGACCAAG AAGAAGATCT CATCATCAGA CTCCACAAGC 
250
TCCTCGGCAA CAGATGGTCG TTGATAGCGA AAAGAGTTCC GGGAAGAACA 
300
GACAACCAAG TAAAGAATTA CTGGAACACA CATCTCAGCA AGAAACTTGG 
350
TCTCGGAGAT CATTCAACTG CCGTCAAAGC CGCATGCGGT GTAGAGTCTC 
400
CACCGTCTAT GGCCCTTATA ACCACAACGT CCTCCTCTCA TCAAGAGATC 
450
TCCGGTGGAA AAAATTCAAC TCTAAGGTTC GACACTTTAG TTGACGAATC 
500
CAAACTCAAA CCAAAATCCA AACTAGTCCA CGCAACACCA ACTGACGTAG 
550
AAGTTGCAGC TACGGTTCCA AATCTGTTCG ATACCTTTTG GGTTCTTGAA 
600
GACGACTTCG AGCTTAGTTC ACTCACTATG ATGGATTTTA CTAATGGGTA 
650
TTGCCTTTGA 
700

>AT5G40330.1 longest ORF length:219
MRMTRDGKEH EYKKGLWTVE EDKILMDYVR THGQGHWNRI AKKTGLKRCG 
50
KSCRLRWMNY LSPNVNRGNF TDQEEDLIIR LHKLLGNRWS LIAKRVPGRT 
100
DNQVKNYWNT HLSKKLGLGD HSTAVKAACG VESPPSMALI TTTSSSHQEI 
150
SGGKNSTLRF DTLVDESKLK PKSKLVHATP TDVEVAATVP NLFDTFWVLE 
200
DDFELSSLTM MDFTNGYCL
250