Locus |
Common name |
Short description |
AT5G40330 |
ATMYBRTF, ATMYB23 |
myb domain protein 23 (.1) |
>AT5G40330.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HindIII, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, StyI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
BglII
| A|GATCT |
225, 446 |
HpaI
| GTT|AAC |
193 |
SpeI
| A|CTAGT |
522 |
Click here to view TAIR data
>AT5G40330.1 length:660
ATGAGAATGA CAAGAGATGG AAAAGAACAT GAATACAAGA AAGGTTTATG | 50 |
GACAGTGGAA GAAGACAAGA TCCTCATGGA TTATGTCCGA ACTCATGGCC | 100 |
AGGGCCACTG GAACCGCATC GCCAAGAAAA CTGGGCTCAA GAGATGTGGG | 150 |
AAAAGCTGTA GGTTGAGATG GATGAACTAC TTAAGCCCTA ATGTTAACAG | 200 |
AGGCAATTTT ACTGACCAAG AAGAAGATCT CATCATCAGA CTCCACAAGC | 250 |
TCCTCGGCAA CAGATGGTCG TTGATAGCGA AAAGAGTTCC GGGAAGAACA | 300 |
GACAACCAAG TAAAGAATTA CTGGAACACA CATCTCAGCA AGAAACTTGG | 350 |
TCTCGGAGAT CATTCAACTG CCGTCAAAGC CGCATGCGGT GTAGAGTCTC | 400 |
CACCGTCTAT GGCCCTTATA ACCACAACGT CCTCCTCTCA TCAAGAGATC | 450 |
TCCGGTGGAA AAAATTCAAC TCTAAGGTTC GACACTTTAG TTGACGAATC | 500 |
CAAACTCAAA CCAAAATCCA AACTAGTCCA CGCAACACCA ACTGACGTAG | 550 |
AAGTTGCAGC TACGGTTCCA AATCTGTTCG ATACCTTTTG GGTTCTTGAA | 600 |
GACGACTTCG AGCTTAGTTC ACTCACTATG ATGGATTTTA CTAATGGGTA | 650 |
TTGCCTTTGA | 700 |
>AT5G40330.1 longest ORF length:219
MRMTRDGKEH EYKKGLWTVE EDKILMDYVR THGQGHWNRI AKKTGLKRCG | 50 |
KSCRLRWMNY LSPNVNRGNF TDQEEDLIIR LHKLLGNRWS LIAKRVPGRT | 100 |
DNQVKNYWNT HLSKKLGLGD HSTAVKAACG VESPPSMALI TTTSSSHQEI | 150 |
SGGKNSTLRF DTLVDESKLK PKSKLVHATP TDVEVAATVP NLFDTFWVLE | 200 |
DDFELSSLTM MDFTNGYCL | 250 |
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