fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G40350 ATMYB24 myb domain protein 24 (.1)

>AT5G40350.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
NcoI C|CATGG 61, 461
PstI CTGCA|G 143
StyI C|C[AT][AT]GG 61, 461


Click here to view TAIR data

>AT5G40350.1 length:645
ATGGAGAAAA GAGAAAGTAG TGGTGGGTCT GGATCAGGAG ATGCAGAGGT 
50
GAGAAAAGGG CCATGGACGA TGGAAGAAGA TTTGATTCTC ATCAATTATA 
100
TCGCCAATCA TGGTGAAGGT GTTTGGAACT CTCTCGCCAA ATCTGCAGGA 
150
CTAAAACGCA CCGGGAAAAG TTGCCGGCTC CGGTGGCTGA ACTACCTCCG 
200
ACCTGATGTG CGACGGGGAA ATATCACACC AGAAGAACAG CTCACCATCA 
250
TGGAACTTCA TGCAAAATGG GGAAATAGGT GGTCAAAAAT TGCAAAGCAT 
300
TTACCAGGAA GAACCGACAA TGAGATAAAG AATTTTTGGA GGACTAAGAT 
350
CCAGAAATAC ATCATCAAGA GCGGAGAAAC GACGACCGTT GGATCACAAA 
400
GCTCCGAGTT TATAAACCAT CATGCGACAA CGAGCCATGT CATGAATGAT 
450
ACTCAAGAAA CCATGGATAT GTATTCTCCA ACGACGTCGT ATCAACATGC 
500
CAGCAATATT AATCAGCAGC TTAATTATGG TAATTATGTG CCTGAATCCG 
550
GTTCGATCAT GATGCCATTA TCTGTTGATC AATCCGAACA AAACTATTGG 
600
AGCGTCGATG ATCTTTGGCC CATGAATATA TATAATGGTA ATTAA
650

>AT5G40350.1 longest ORF length:214
MEKRESSGGS GSGDAEVRKG PWTMEEDLIL INYIANHGEG VWNSLAKSAG 
50
LKRTGKSCRL RWLNYLRPDV RRGNITPEEQ LTIMELHAKW GNRWSKIAKH 
100
LPGRTDNEIK NFWRTKIQKY IIKSGETTTV GSQSSEFINH HATTSHVMND 
150
TQETMDMYSP TTSYQHASNI NQQLNYGNYV PESGSIMMPL SVDQSEQNYW 
200
SVDDLWPMNI YNGN
250