fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G41410 BEL1 BELL 1, POX (plant homeobox) family protein (.1)

>AT5G41410.1 CDS map

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Uncut enzymes: AatII, Acc65I, AccI, AccIII(BspMII), AciI, AfeI, AflII, AhdI, AlwI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AvaI, AvrII, BaeI, BamHI, BanI, BbsI, BbvCI, BbvI, BcgI, BciVI, BglI, BlpI, BmrI, BpmI, BsaI, BsaXI, BseRI, BsgI, BsiEI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BsoBI, BspEI, BspMI, BspT107I(HgiCI), BsrBI, BsrGI, BssHII, BssSI, BstAPI, BstNI, BstXI, BstZ17I, Bsu36I, BtrI, BtsI, DrdI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HaeII, HgaI, HpaI, HphI, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MspA1I, NaeI, , NarI, NdeI, NgoMIV, NheI, NotI, NruI, NsiI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PflFI, PflMI, PleI, PmeI, PpuMI, PsiI, PspGI, PspOMI, PstI, PvuI, PvuII, RsrII, SacII, SalI, SapI, SbfI, ScaI, SexAI, SfaNI, SfcI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SpeI, SphI, StuI, SwaI, TliI, Tth111I, XbaI, XcmI, XhoI, XmaI
Name Recognition sequence Cut positions
AccII(FnuDII) CG|CG 1184, 1199
AclI AA|CGTT 1212, 1548
AflIII A|CPuPyGT 780
AgeI A|CCGGT 1737
AluI AG|CT 258, 604, 612, 855, 1033, 1117, 1219, 1576, 1807
AlwNI CAGNNN|CTG 262
ApoI Pu|AATTPy 1782, 1797
AseI AT|TAAT 64, 1327
AvaII G|G[AT]CC 1436, 1442, 1734
BalI TGG|CCA 1698
BanII GPuGCPy|C 1808
BclI T|GATCA 249, 741, 1770
BfaI C|TAG 929
BglII A|GATCT 131
BsaAI PyAC|GTPu 1082, 1607
BsaBI GATNN|NNATC 113, 215, 254, 1420, 1769
BsaHI GPu|CGPyC 1175
BsaJI C|CNNGG 75, 357, 1096, 1171, 1524
BsaWI [AT]|CCGG[AT] 454, 1434, 1464, 1507, 1737
BsiHKAI G[AT]GC[AT]|C 1808
BslI CCNNNNN|NNGG 357, 1185
Bsp1286I G[GAT]GC[CAT]|C 1808
BspDI AT|CGAT 1423
BspHI T|CATGA 1821
BsrDI GCAATGNN| 298, 972
BsrFI Pu|CCGGPy 1737
BsrI ACTGGN| 1291
BssKI |CCNGG 1439
BstBI TT|CGAA 415
BstEII G|GTNACC 1571
BstF5I GGATGNN| 195
BstUI CG|CG 1184, 1199
BstYI Pu|GATCPy 71, 131
BtgI C|CPuPyGG 1096, 1524
Cac8I GCN|NGC 1190
Cfr10I [AG]|CCGG[TC] 1737
ClaI AT|CGAT 1423
DdeI C|TNAG 175, 420, 618
DpnI GA-CH3|TC 8, 70, 107, 130, 209, 248, 740, 1112, 1420, 1450, 1769
DpnII |GATC 8, 70, 107, 130, 209, 248, 740, 1112, 1420, 1450, 1769
DraI TTT|AAA 993
DraIII CACNNN|GTG 1610
EaeI Py|GGCCPu 1698
Fnu4HI GC|NGC 900, 906, 918, 1077, 1124, 1186
HaeIII GG|CC 1279, 1602, 1697
HhaI GCG|C 1200
HinP1I G|CGC 1200
HincII GTPy|PuAC 1159, 1545
HindIII A|AGCTT 1034, 1118
HinfI G|ANTC 254, 270, 479, 599, 1016, 1151, 1467
HpaII C|CGG 453, 1433, 1439, 1463, 1506, 1736
Hpy188I TCN|GA 68, 128, 207, 230, 251, 421, 476, 575, 818, 1253, 1778
Hpy99I CG[AT]CG| 1753
HpyCH4III ACN|GT 1097, 1372, 1567, 1654, 1711
HpyCH4IV A|CGT 1081, 1211, 1547, 1606, 1614, 1639
HpyCH4V TG|CA 293, 629, 1075, 1330
MboI |GATC 8, 70, 107, 130, 209, 248, 740, 1112, 1420, 1450, 1769
MscI TGG|CCA 1698
MseI T|TAA 63, 300, 858, 992, 1326
MslI CAPyNN|NNPuTG 157, 496
MspI C|CGG 453, 1433, 1439, 1463, 1506, 1736
MwoI GCNNNNN|NNGC 845, 906, 966
N.BstNBI GAGTCNNNN|N 604
NciI CC|[CG]GG 1439
NcoI C|CATGG 1524
NlaIII CATG| 151, 283, 746, 779, 808, 844, 1523, 1820
NlaIV GGN|NCC 1437
NspI PuCATG|Py 780
PciI A|CATGT 780
PmlI CAC|GTG 1082, 1607
PshAI GACNN|NNGTC 722
RsaI GT|AC 243, 1369, 1564
SacI GAGCT|C 1808
Sau3AI |GATC 8, 70, 107, 130, 209, 248, 740, 1112, 1420, 1450, 1769
Sau96I G|GNCC 1280, 1436, 1442, 1602, 1734
ScrFI CC|NGG 1439
SmlI C|TPyPuAG 608, 802, 1691
SspI AAT|ATT 1745
StyI C|C[AT][AT]GG 75, 357, 1171, 1524
Taqƒ¿I T|CGA 414, 849, 1110, 1422, 1458, 1754
TfiI G|A[AT]TC 254, 270, 479, 1016, 1467
TseI G|C[AT]GC 906, 1077
Tsp45I |GT[CG]AC 22, 520, 724, 1206, 1485, 1510, 1581, 1612, 1683
Tsp509I |AATT 1316, 1781, 1796, 1812
TspRI NNCA[CG]TGNN| 952, 1683
XmnI GAANN|NNTTC 1238


Click here to view TAIR data

>AT5G41410.1 length:1836
ATGGCAAGAG ATCAGTTCTA TGGTCACAAT AACCATCATC ATCAAGAGCA 
50
ACAACATCAA ATGATTAATC AGATCCAAGG GTTTGATGAG ACAAACCAAA 
100
ACCCAACCGA TCATCATCAT TACAATCATC AGATCTTTGG CTCAAACTCC 
150
AACATGGGTA TGATGATAGA CTTCTCTAAG CAACAACAGA TTAGGATGAC 
200
AAGTGGTTCG GATCATCATC ATCATCATCA TCAGACAAGT GGTGGTACTG 
250
ATCAGAATCA GCTTCTGGAA GATTCTTCAT CTGCCATGAG ACTATGCAAT 
300
GTTAATAATG ATTTCCCAAG TGAAGTAAAT GATGAGAGAC CACCACAAAG 
350
ACCAAGCCAA GGTCTTTCCC TTTCTCTCTC CTCTTCAAAT CCTACAAGCA 
400
TCAGTCTCCA ATCTTTCGAA CTCAGACCCC AACAACAACA ACAACAAGGG 
450
TATTCCGGTA ATAAATCAAC ACAACATCAG AATCTCCAAC ACACGCAGAT 
500
GATGATGATG ATGATGAATA GTCACCACCA AAACAACAAC AATAACAATC 
550
ATCAGCATCA TAATCATCAT CAGTTTCAGA TTGGGAGTTC CAAGTATTTG 
600
AGTCCAGCTC AAGAGCTACT GAGTGAGTTT TGCAGTCTTG GAGTAAAGGA 
650
AAGCGATGAA GAAGTGATGA TGATGAAGCA TAAGAAGAAG CAAAAGGGTA 
700
AACAACAAGA AGAGTGGGAC ACAAGTCACC ACAGCAACAA TGATCAACAT 
750
GACCAATCTG CGACTACTTC TTCAAAGAAA CATGTTCCAC CACTTCACTC 
800
TCTTGAGTTC ATGGAACTTC AGAAAAGAAA AGCCAAGTTG CTCTCCATGC 
850
TCGAAGAGCT TAAAAGAAGA TATGGACATT ACCGAGAGCA AATGAGAGTT 
900
GCGGCGGCAG CCTTTGAAGC GGCGGTTGGA CTAGGAGGGG CAGAGATATA 
950
CACTGCGTTA GCGTCAAGGG CAATGTCAAG ACACTTTCGG TGTTTAAAAG 
1000
ACGGACTTGT GGGACAGATT CAAGCAACAA GTCAAGCTTT GGGAGAGAGA 
1050
GAAGAGGATA ATCGTGCGGT TTCTATTGCA GCACGTGGAG AAACTCCACG 
1100
GTTGAGATTG CTCGATCAAG CTTTGCGGCA ACAGAAATCG TATCGCCAAA 
1150
TGACTCTTGT TGACGCTCAT CCTTGGCGTC CACAACGCGG CTTGCCTGAA 
1200
CGCGCAGTCA CAACGTTGAG AGCTTGGCTC TTTGAACACT TTCTTCACCC 
1250
ATATCCGAGC GATGTTGATA AGCATATATT GGCCCGACAA ACTGGTTTAT 
1300
CAAGAAGTCA GGTATCAAAT TGGTTTATTA ATGCAAGAGT TAGGCTATGG 
1350
AAACCAATGA TTGAAGAAAT GTACTGTGAA GAAACAAGAA GTGAACAAAT 
1400
GGAGATTACA AACCCGATGA TGATCGATAC TAAACCGGAC CCGGACCAGT 
1450
TGATCCGTGT CGAACCGGAA TCTTTATCCT CAATAGTGAC AAACCCTACA 
1500
TCCAAATCCG GTCACAACTC AACCCATGGA ACGATGTCGT TAGGGTCAAC 
1550
GTTTGACTTT TCCTTGTACG GTAACCAAGC TGTGACATAC GCTGGTGAAG 
1600
GAGGGCCACG TGGTGACGTT TCCTTGACGC TTGGGTTACA ACGTAACGAT 
1650
GGTAACGGTG GTGTGAGTTT AGCGTTGTCT CCAGTGACGG CTCAAGGTGG 
1700
CCAACTTTTC TACGGTAGAG ACCACATTGA AGAAGGACCG GTTCAATATT 
1750
CAGCGTCGAT GTTAGATGAT GATCAAGTTC AGAATTTGCC TTATAGGAAT 
1800
TTGATGGGAG CTCAATTACT TCATGATATT GTTTGA
1850

>AT5G41410.1 longest ORF length:611
MARDQFYGHN NHHHQEQQHQ MINQIQGFDE TNQNPTDHHH YNHQIFGSNS 
50
NMGMMIDFSK QQQIRMTSGS DHHHHHHQTS GGTDQNQLLE DSSSAMRLCN 
100
VNNDFPSEVN DERPPQRPSQ GLSLSLSSSN PTSISLQSFE LRPQQQQQQG 
150
YSGNKSTQHQ NLQHTQMMMM MMNSHHQNNN NNNHQHHNHH QFQIGSSKYL 
200
SPAQELLSEF CSLGVKESDE EVMMMKHKKK QKGKQQEEWD TSHHSNNDQH 
250
DQSATTSSKK HVPPLHSLEF MELQKRKAKL LSMLEELKRR YGHYREQMRV 
300
AAAAFEAAVG LGGAEIYTAL ASRAMSRHFR CLKDGLVGQI QATSQALGER 
350
EEDNRAVSIA ARGETPRLRL LDQALRQQKS YRQMTLVDAH PWRPQRGLPE 
400
RAVTTLRAWL FEHFLHPYPS DVDKHILARQ TGLSRSQVSN WFINARVRLW 
450
KPMIEEMYCE ETRSEQMEIT NPMMIDTKPD PDQLIRVEPE SLSSIVTNPT 
500
SKSGHNSTHG TMSLGSTFDF SLYGNQAVTY AGEGGPRGDV SLTLGLQRND 
550
GNGGVSLALS PVTAQGGQLF YGRDHIEEGP VQYSASMLDD DQVQNLPYRN 
600
LMGAQLLHDI V
650