|
|
|
|
|
|
|
|
| Locus | Common name | Short description |
| AT5G43650 | BHLH92, bHLH092 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.1) |
>AT5G43650.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, HpaI, KpnI, NcoI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, StyI, XbaI, XhoI
| Name | Recognition sequence | Cut positions |
| EcoRV | GAT|ATC | 159 |
| HindIII | A|AGCTT | 719 |
| NdeI | CA|TATG | 268 |
| SpeI | A|CTAGT | 420 |
Click here to view TAIR data
>AT5G43650.1 length:744
ATGGATAACT TTTTTCTAGG TTTGAGTTGT CAAGAAGAAA ACAACTTCTG | 50 |
GGATCTAATC GTGGCCGACA TCTCGGGTGA TAGAAGCGTC AGTGTACCTA | 100 |
TCAGAAGCGC CTTTAGGTCA TATATGAAGG ACACGGAACT GAGGATGATG | 150 |
TCGCCGAAGA TATCTTCTTC GAAGGTGAAC GTGAAGAAGA GAATGGTCAA | 200 |
TCTTCTGAGA AAGAATTGGG AGGAGAAGAA AAATACGGTG GCTCCAGAGA | 250 |
AGGAAAGAAG CCGGCGACAT ATGTTGAAAG AAAGGACGAG AAGAGAGAAA | 300 |
CAAAAACAGA GTTACTTAGC TCTCCATTCT CTACTACCAT TTGCCACTAA | 350 |
GAATGACAAA AATTCGATTG TCGAAAAAGC CGTGGATGAG ATTGCGAAAT | 400 |
TACAAAGATT AAAGAAAGAA CTAGTGAGAA GAATTAAAGT GATTGAGGAA | 450 |
AAATCAGCAA AGGATGGTCA TGATGAAATG AGTGAAACAA AGGTTAGGGT | 500 |
TAATCTAAAA GAACCTTTGT CTGGACTAGA TTCAATGCTT GAAGCGCTTC | 550 |
ATTATCTTAA ATCAATGGGA ACAAAACTGA AAACAGTCCA TGCCAATTTC | 600 |
TCTCCTCAAG AGTTTTCTGC GACCATGACC ATCGAGACTC AGATTAGAGG | 650 |
AGAGGAGGTT GAAAAGAGAG TGGAAAGAAG ACTCCAGGAA ACTGAATGGA | 700 |
AACTTCTCTT TCTCCCAGAA GCTTCCTTTT ACAAAGACTA CTAA | 750 |
>AT5G43650.1 longest ORF length:247
MDNFFLGLSC QEENNFWDLI VADISGDRSV SVPIRSAFRS YMKDTELRMM | 50 |
SPKISSSKVN VKKRMVNLLR KNWEEKKNTV APEKERSRRH MLKERTRREK | 100 |
QKQSYLALHS LLPFATKNDK NSIVEKAVDE IAKLQRLKKE LVRRIKVIEE | 150 |
KSAKDGHDEM SETKVRVNLK EPLSGLDSML EALHYLKSMG TKLKTVHANF | 200 |
SPQEFSATMT IETQIRGEEV EKRVERRLQE TEWKLLFLPE ASFYKDY | 250 |