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| Locus | Common name | Short description |
| AT5G47370 | HAT2 | Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein (.1) |
>AT5G47370.1 CDS map
>>Show genomic map
Uncut enzymes: AatII, Acc65I, AccI, AccII(FnuDII), AciI, AclI, AfeI, AflII, AflIII, AgeI, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AseI, AvaI, AvaII, AvrII, BaeI, BalI, BamHI, BanI, BanII, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BglI, BlpI, BmrI, BpmI, BsaBI, BsaHI, BsaI, BsaXI, BseRI, BsgI, BsiHKAI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BsoBI, Bsp1286I, BspDI, BspHI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BsrGI, BsrI, BssHII, BssKI, BssSI, BstAPI, BstEII, BstF5I, BstNI, BstUI, BstXI, BstZ17I, Bsu36I, BtrI, BtsI, ClaI, DraI, DraIII, DrdI, EaeI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRI, EcoRV, FauI, Fnu4HI, FokI, FseI, FspI, HaeII, HgaI, HhaI, HinP1I, HphI, HpyCH4V, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MscI, MspA1I, N.BstNBI, NaeI, , NarI, NciI, NdeI, NgoMIV, NotI, NruI, NsiI, NspI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflFI, PflMI, PleI, PmeI, PpuMI, PshAI, PsiI, PspGI, PspOMI, PstI, PvuII, RsrII, SacI, SacII, SalI, SapI, SbfI, ScaI, ScrFI, SexAI, SfaNI, SfcI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SpeI, SphI, SspI, StuI, SwaI, TliI, TseI, TspRI, Tth111I, XbaI, XcmI, XhoI, XmaI, XmnI
| Name | Recognition sequence | Cut positions |
| AccIII(BspMII) | T|CCGGA | 280, 324 |
| AluI | AG|CT | 35, 390, 468, 472, 486, 535, 597, 639, 654 |
| ApoI | Pu|AATTPy | 822 |
| BfaI | C|TAG | 20, 470, 537 |
| BglII | A|GATCT | 18, 150 |
| BsaAI | PyAC|GTPu | 341 |
| BsaJI | C|CNNGG | 121, 784 |
| BsaWI | [AT]|CCGG[AT] | 280, 324, 614 |
| BsiEI | CGPuPy|CG | 844 |
| BslI | CCNNNNN|NNGG | 250, 330 |
| BspEI | T|CCGGA | 280, 324 |
| BsrFI | Pu|CCGGPy | 286 |
| BstBI | TT|CGAA | 644 |
| BstYI | Pu|GATCPy | 18, 150 |
| BtgI | C|CPuPyGG | 121, 784 |
| Cac8I | GCN|NGC | 471, 719 |
| Cfr10I | [AG]|CCGG[TC] | 286 |
| DdeI | C|TNAG | 33, 38, 350, 393, 481 |
| DpnI | GA-CH3|TC | 17, 137, 149, 232, 305, 316, 326, 407, 843 |
| DpnII | |GATC | 17, 137, 149, 232, 305, 316, 326, 407, 843 |
| HaeIII | GG|CC | 731, 765 |
| HincII | GTPy|PuAC | 190 |
| HindIII | A|AGCTT | 36 |
| HinfI | G|ANTC | 74, 80, 115, 274, 683 |
| HpaI | GTT|AAC | 190 |
| HpaII | C|CGG | 279, 285, 297, 323, 613 |
| Hpy188I | TCN|GA | 68, 77, 147, 351, 623, 677 |
| Hpy99I | CG[AT]CG| | 302, 311, 379 |
| HpyCH4III | ACN|GT | 172, 186, 226, 584, 673 |
| HpyCH4IV | A|CGT | 165, 340, 377 |
| MboI | |GATC | 17, 137, 149, 232, 305, 316, 326, 407, 843 |
| MseI | T|TAA | 189, 548 |
| MslI | CAPyNN|NNPuTG | 846 |
| MspI | C|CGG | 279, 285, 297, 323, 613 |
| MwoI | GCNNNNN|NNGC | 247 |
| NcoI | C|CATGG | 121 |
| NheI | G|CTAGC | 471 |
| NlaIII | CATG| | 120, 703, 812 |
| NlaIV | GGN|NCC | 125, 283, 295, 346, 521 |
| PmlI | CAC|GTG | 341 |
| PvuI | CGAT|CG | 844 |
| RsaI | GT|AC | 228, 334 |
| Sau3AI | |GATC | 17, 137, 149, 232, 305, 316, 326, 407, 843 |
| Sau96I | G|GNCC | 732, 766 |
| SmlI | C|TPyPuAG | 237, 652 |
| StyI | C|C[AT][AT]GG | 121 |
| Taqƒ¿I | T|CGA | 135, 328, 380, 423, 643, 743 |
| TfiI | G|A[AT]TC | 74, 80, 274 |
| Tsp45I | |GT[CG]AC | 218 |
| Tsp509I | |AATT | 666, 821 |
Click here to view TAIR data
>AT5G47370.1 length:852
ATGATGATGG GCAAAGAAGA TCTAGGTTTG AGCCTAAGCT TAGGGTTTTC | 50 |
ACAAAATCAC AATCCTCTTC AGATGAATCT GAATCCTAAC TCTTCATTAT | 100 |
CAAACAATCT CCAGAGACTC CCATGGAACC AAACATTCGA TCCTACATCA | 150 |
GATCTTCGCA AGATAGACGT GAACAGTTTT CCATCAACGG TTAACTGCGA | 200 |
GGAAGACACA GGAGTTTCGT CACCAAACAG TACGATCTCA AGCACCATTA | 250 |
GCGGGAAGAG AAGTGAGAGA GAAGGAATCT CCGGAACCGG CGTTGGCTCC | 300 |
GGCGACGATC ACGACGAGAT CACTCCGGAT CGAGGGTACT CACGTGGAAC | 350 |
CTCAGATGAA GAAGAAGACG GGGGCGAAAC GTCGAGGAAG AAGCTCAGGT | 400 |
TATCAAAAGA TCAGTCTGCT TTTCTCGAAG AGACTTTCAA AGAACACAAC | 450 |
ACTCTCAATC CCAAACAGAA GCTAGCTTTG GCTAAGAAGC TGAACTTGAC | 500 |
GGCAAGACAA GTGGAAGTGT GGTTCCAAAA CAGAAGAGCT AGAACCAAGT | 550 |
TAAAGCAAAC GGAGGTAGAT TGCGAATACT TGAAACGGTG CGTAGAGAAG | 600 |
CTAACGGAAG AGAACCGGAG ACTTCAGAAA GAGGCTATGG AGCTTCGAAC | 650 |
TCTCAAGCTG TCTCCACAAT TCTACGGTCA GATGACTCCA CCAACTACAC | 700 |
TCATCATGTG TCCTTCGTGC GAGCGTGTGG GTGGCCCATC ATCATCGAAC | 750 |
CATCACCACA ATCACAGGCC CGTTTCTATC AATCCGTGGG TTGCTTGTGC | 800 |
TGGTCAGGTG GCTCATGGGC TGAATTTTGA AGCCTTGCGT CCACGATCGT | 850 |
GA | 900 |
>AT5G47370.1 longest ORF length:283
MMMGKEDLGL SLSLGFSQNH NPLQMNLNPN SSLSNNLQRL PWNQTFDPTS | 50 |
DLRKIDVNSF PSTVNCEEDT GVSSPNSTIS STISGKRSER EGISGTGVGS | 100 |
GDDHDEITPD RGYSRGTSDE EEDGGETSRK KLRLSKDQSA FLEETFKEHN | 150 |
TLNPKQKLAL AKKLNLTARQ VEVWFQNRRA RTKLKQTEVD CEYLKRCVEK | 200 |
LTEENRRLQK EAMELRTLKL SPQFYGQMTP PTTLIMCPSC ERVGGPSSSN | 250 |
HHHNHRPVSI NPWVACAGQV AHGLNFEALR PRS | 300 |