fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G53200 TRY TRIPTYCHON, Homeodomain-like superfamily protein (.1)

>AT5G53200.1 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 114


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>AT5G53200.1 length:321
ATGGATAACA CTGACCGTCG TCGCCGTCGT AAGCAACACA AAATCGCCCT 
50
CCATGACTCT GAAGAAGTGA GCAGTATCGA ATGGGAGTTT ATCAACATGA 
100
CTGAACAAGA AGAAGATCTC ATCTTTCGAA TGTACAGACT TGTCGGTGAT 
150
AGGTGGGATT TGATAGCAGG AAGAGTTCCT GGAAGACAAC CAGAGGAGAT 
200
AGAGAGATAT TGGATAATGA GAAACAGTGA AGGCTTTGCT GATAAACGAC 
250
GCCAGCTTCA CTCATCTTCC CACAAACATA CCAAGCCTCA CCGTCCTCGC 
300
TTTTCTATCT ATCCTTCCTA G
350

>AT5G53200.1 longest ORF length:106
MDNTDRRRRR KQHKIALHDS EEVSSIEWEF INMTEQEEDL IFRMYRLVGD 
50
RWDLIAGRVP GRQPEEIERY WIMRNSEGFA DKRRQLHSSS HKHTKPHRPR 
100
FSIYPS
150