fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G58280 AP2/B3-like transcriptional factor family protein (.1)

>AT5G58280.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 632
NcoI C|CATGG 5
PstI CTGCA|G 335
StyI C|C[AT][AT]GG 5


Click here to view TAIR data

>AT5G58280.1 length:822
ATGGCCATGG CCTATGAGGA AGCTCGCAAG CTCCGTCTTC AAGAGAATCA 
50
CAAGCGATTT CAATCCAATT TTGTAGCTTT ACCACAATTT CAGCTTCTTC 
100
AGCAGCGTAA TCACAAACCC ATCGATAAAG CCCTCTTAGC TACTGCTGAA 
150
CCAAGACGCT CTTCCCGTGT TCGTACCGTA ATTTCTTCCT ATCGCGATGA 
200
TGTCGTCGTA GACACTGGTC GTACTTCGAA TCTGAGGAGA TCGCGACATA 
250
GCTCTACATG GGCGACCTAC ATTTCTCGAC CTCTCCATGA GTGCAAGTTT 
300
GCATCTTATG AAGAAAAGGT TGGAGCATTC AAGGCTGCAG AGAAGTTCCA 
350
GAGGAGCCTT AAATCTCCAC ATCCTTACTT TGTGAAATCT ATGGTTCGCT 
400
CCCATGTTTA CAGTTGCTTT TGGCTGGGGC TTCCTTCAAG ATTCTGTGCA 
450
GACAATTTTC CTGAGGAAAC TATGGAAATA GAACTAGAGG ATGAAGAAGG 
500
CGAAGTGTAT GAAGCAGTGT ACATTGGTAG AAGAGCTGGA CTCAGTGGTG 
550
GTTGGAAAAG GTTTGCTCTT GATCATAAAT TGGATGATGG TGATGCTCTA 
600
CTCTTTGAAT TGGTTGAACC AAAGAAGTTC AAGATCTATG TGTTTAAAGG 
650
AAATGAGAAC GCTAATCTTA CAAGCGCCAG AAAGAGAGGC AGAGCAACGA 
700
CGCCAAGTGA AGAAGAAGAA GAAGAAGAAG ATAAGGATGT TGAAGAATCA 
750
GGTGATGAGG AACACAGCTC AAGAGCCACT AAGAGATCAT CCGTAAGGTT 
800
ACTAAGGAAG AGGAAAGCAT AA
850

>AT5G58280.1 longest ORF length:273
MAMAYEEARK LRLQENHKRF QSNFVALPQF QLLQQRNHKP IDKALLATAE 
50
PRRSSRVRTV ISSYRDDVVV DTGRTSNLRR SRHSSTWATY ISRPLHECKF 
100
ASYEEKVGAF KAAEKFQRSL KSPHPYFVKS MVRSHVYSCF WLGLPSRFCA 
150
DNFPEETMEI ELEDEEGEVY EAVYIGRRAG LSGGWKRFAL DHKLDDGDAL 
200
LFELVEPKKF KIYVFKGNEN ANLTSARKRG RATTPSEEEE EEEDKDVEES 
250
GDEEHSSRAT KRSSVRLLRK RKA
300