Locus |
Common name |
Short description |
AT5G58280 |
|
AP2/B3-like transcriptional factor family protein (.1) |
>AT5G58280.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
BglII
| A|GATCT |
632 |
NcoI
| C|CATGG |
5 |
PstI
| CTGCA|G |
335 |
StyI
| C|C[AT][AT]GG |
5 |
Click here to view TAIR data
>AT5G58280.1 length:822
ATGGCCATGG CCTATGAGGA AGCTCGCAAG CTCCGTCTTC AAGAGAATCA | 50 |
CAAGCGATTT CAATCCAATT TTGTAGCTTT ACCACAATTT CAGCTTCTTC | 100 |
AGCAGCGTAA TCACAAACCC ATCGATAAAG CCCTCTTAGC TACTGCTGAA | 150 |
CCAAGACGCT CTTCCCGTGT TCGTACCGTA ATTTCTTCCT ATCGCGATGA | 200 |
TGTCGTCGTA GACACTGGTC GTACTTCGAA TCTGAGGAGA TCGCGACATA | 250 |
GCTCTACATG GGCGACCTAC ATTTCTCGAC CTCTCCATGA GTGCAAGTTT | 300 |
GCATCTTATG AAGAAAAGGT TGGAGCATTC AAGGCTGCAG AGAAGTTCCA | 350 |
GAGGAGCCTT AAATCTCCAC ATCCTTACTT TGTGAAATCT ATGGTTCGCT | 400 |
CCCATGTTTA CAGTTGCTTT TGGCTGGGGC TTCCTTCAAG ATTCTGTGCA | 450 |
GACAATTTTC CTGAGGAAAC TATGGAAATA GAACTAGAGG ATGAAGAAGG | 500 |
CGAAGTGTAT GAAGCAGTGT ACATTGGTAG AAGAGCTGGA CTCAGTGGTG | 550 |
GTTGGAAAAG GTTTGCTCTT GATCATAAAT TGGATGATGG TGATGCTCTA | 600 |
CTCTTTGAAT TGGTTGAACC AAAGAAGTTC AAGATCTATG TGTTTAAAGG | 650 |
AAATGAGAAC GCTAATCTTA CAAGCGCCAG AAAGAGAGGC AGAGCAACGA | 700 |
CGCCAAGTGA AGAAGAAGAA GAAGAAGAAG ATAAGGATGT TGAAGAATCA | 750 |
GGTGATGAGG AACACAGCTC AAGAGCCACT AAGAGATCAT CCGTAAGGTT | 800 |
ACTAAGGAAG AGGAAAGCAT AA | 850 |
>AT5G58280.1 longest ORF length:273
MAMAYEEARK LRLQENHKRF QSNFVALPQF QLLQQRNHKP IDKALLATAE | 50 |
PRRSSRVRTV ISSYRDDVVV DTGRTSNLRR SRHSSTWATY ISRPLHECKF | 100 |
ASYEEKVGAF KAAEKFQRSL KSPHPYFVKS MVRSHVYSCF WLGLPSRFCA | 150 |
DNFPEETMEI ELEDEEGEVY EAVYIGRRAG LSGGWKRFAL DHKLDDGDAL | 200 |
LFELVEPKKF KIYVFKGNEN ANLTSARKRG RATTPSEEEE EEEDKDVEES | 250 |
GDEEHSSRAT KRSSVRLLRK RKA | 300 |
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