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| Locus | Common name | Short description |
| AT5G58280 | AP2/B3-like transcriptional factor family protein (.1) |
>AT5G58280.1 genomic map
>>Show CDS map
Uncut enzymes: ApaI, AscI, NotI, SacI, SalI, SmaI, XhoI
| Name | Recognition sequence | Cut positions |
| BamHI | G|GATCC | 6585 |
| BglII | A|GATCT | 5142, 5803, 5900 |
| EcoRI | G|AATTC | 324, 6028, 6127 |
| EcoRV | GAT|ATC | 87, 1815, 5735, 5949 |
| HindIII | A|AGCTT | 336, 1227 |
| HpaI | GTT|AAC | 2279 |
| KpnI | GGTAC|C | 2681 |
| NcoI | C|CATGG | 3165, 4004 |
| NdeI | CA|TATG | 2534 |
| NheI | G|CTAGC | 565 |
| PacI | TTAAT|TAA | 3921 |
| PstI | CTGCA|G | 2217, 2610, 4664 |
| PvuII | CAG|CTG | 1278 |
| SpeI | A|CTAGT | 3017, 3911 |
| StyI | C|C[AT][AT]GG | 3165, 3984, 4004, 5432, 6734 |
| XbaI | T|CTAGA | 2251 |
Click here to view TAIR data
>AT5G58280 genomic sequence (4000-4062,4240-4377,4458-4522,4596-4755,4851-5057,5144-5332,) length:6832
aataattggc agttgctcat tcatatttgg atttcactat tcattcgtct | 50 |
ctaaaaacac tcgacgtaat taatatgtat ctttcagATA TCTATGGTAT | 100 |
CAGGTATACT GGCATACAAG TTTGGAGCTG CTTTTGCCTG GATTACTTCT | 150 |
CTCTCCGTTG GATCATATAT CGTTTTCACA TTAGCTGTGA CACAGgtact | 200 |
gtgccttttt cggtattctc ttttcaatgc caactataat gcaatacttg | 250 |
cgttattatc atgataatcc agcaataact gtgatatttt atttaagaaa | 300 |
ctactatagt atacattgtt ctggaattcg ttactaagct tctctaatct | 350 |
taactgtatc aactctttgg atcggcttaa atcattctag ttgtgatatt | 400 |
aggtttgatg atgtatagaa ggatagttgt cttcatacat tctcttcaac | 450 |
tttcattatc ttgttacaaa tctttttggt gtcaaacgct ttgctcacgg | 500 |
ttttatttat tttatccagT GGCGAACCAA GTTTAGAAAG GCTATGAACA | 550 |
AAGCTGATAA TGATGCTAGC ACAAGGGCCA TTGATTCTCT GATAAATTAT | 600 |
GAGgtaaatt tttaatctta atcattttgc ttgacttgca gttttgacag | 650 |
aatttctttt tcgtttcagA CTGTCAAATA TTTTAACAAT GAAGGTTATG | 700 |
AGGCTGAAAA GTATGACCAG TTCCTGAAAA gtaagtaact ctactagctg | 750 |
tttagatgaa aacatttatc ttaatttcca aaaaaaaaga gaaaattctc | 800 |
cagttttagt ttgagcaaga atagtagcaa caagccaaca agtaacaaat | 850 |
gtagatcaga aaatgcgctg atgactcttt ttacatcttt atttacacgt | 900 |
tctttttcta ggaagaaaac cgattgatat tttaccataa tatattattg | 950 |
ctccgtccat ttaccttaat ttatcttgtg acgattctgc tgcttatccc | 1000 |
agAATATGAA GATGCTGCCC TGCAAACTCA AAGAAGTCTT GCTTTCTTAA | 1050 |
ACTTTGGACA AAGTATCATA TTTAGTACAG CTTTATCAAC AGCAATGGTG | 1100 |
TTGTGCTCTC AGGGTATCAT GAATGGCCAG ATGACAGTCG GTGATTTGgt | 1150 |
cagtgcgtcc tttgattttt ccttgacatt ggtattttat gtttctctgc | 1200 |
attttttatc caaattgttt tctaataagc ttttgcatat ttgggtgatg | 1250 |
cagGTTATGG TGAATGGACT TCTCTTTCAG CTGTCTCTTC CTCTAAATTT | 1300 |
TTTGGGTAGT GTTTACCGTG AAACAATTCA GAGCCTTGTG GACATGAAAT | 1350 |
CAATGTTCCA GTTGCTAGAG gtatgtgagg atgttataat tgtttcttta | 1400 |
aactctgcat ttggttaagt ttcttaaaca cttttttttt tatgataatg | 1450 |
ctttaaatgc atgcttttta gtatgcactc ctggcatgtt gaattgatta | 1500 |
tgtggtattc tcttactgtt tcagGAGAAA TCTGACATCA CAAATACAAG | 1550 |
TGACGCAAAG CCTCTTGTAC TGAAAGGTGG AAACATTGAG TTTGAAAATG | 1600 |
TACACTTCAG gtaggtgttg attttagtgg aacattactg tcatactaat | 1650 |
cgttggagcc atagtatctt gggtatgaaa gtgtgttaag attaatatga | 1700 |
gtaattaact caaattttat ttaacttatg aactcaatac accccagaaa | 1750 |
gtctttacta attagctttg ttgagcttat caaagtggca aattataaga | 1800 |
cattgcatga tttggatatc agcttcatgt tgtggctgaa gacgaagggg | 1850 |
gttaataact tatgtctatt gccacatcat ctttctcttt ttctacaatt | 1900 |
acagTTACCT TCCAGAGAGA AAAATATTAG ATGGAATTTC CTTTGTCGTA | 1950 |
CCGGCAGGAA AAAGTGTGGC AATCGTTGGT ACTAGCGGGA GCGgtaattc | 2000 |
ctaaacctct tctgtttaag catctaagtt ctgtgtaaat ttgttattct | 2050 |
ggtatactgt tgcaaatctt attatttgtt ctatggcagG CAAGTCAACA | 2100 |
ATTCTTAGGA TGCTATTCAG ATTCTTCGAC ACAGATTCCG GAAATgtaag | 2150 |
catttttttt gtttgtgaaa tgtggggtct tgtttggaag cattgtagca | 2200 |
acgaaagtac accctgctgc agagaaattt agtgaagaaa atgcttggta | 2250 |
tctagataac atcttttttg tcatgttggt taacagATAA GGATTGACGG | 2300 |
GCAAGATATA AAGGAAGTGA GACTAGATAG CCTCCGAAGC TCCATAGGAG | 2350 |
TTGTGCCGCA AGATACTgta agttggcatt tctctacttc tcatcgtgag | 2400 |
gctttttgtt atatacacca ctatgacctg cattcatttg tttctcgcct | 2450 |
ttcttctcat tgtaacttct ctggtcatgc tagacacttg atttttttta | 2500 |
tgtttttttt cacttttctt ctcttttatt tttcatatgt atcattgtta | 2550 |
gcttttgtga aggtatagca ctccaagttt tgttgttctc aagggtaatc | 2600 |
tctactgcac tgcagGTTCT CTTCAATGAC ACAATATTTC ACAACATACA | 2650 |
TTATGGACGT CTCTCAGCTA CAGAAGAAGA Ggtaccagtc aacttatact | 2700 |
tggtggaaat gtcaagttta atatcaataa tcctcatcta acataaattt | 2750 |
tcaatccagG TGTATGAGGC TGCTCGGCGT GCTGCAATTC ATGAAACAAT | 2800 |
CAGTAATTTC CCTGATAAAT ATTCCACGAT CGTTGGGGAA AGGGGGCTCA | 2850 |
AGgtcagtat tttgatgtta tatctggaat gcatgattga gttatgggga | 2900 |
gttagtcacc cgtcgttttt gtcattgtca taatcaaagt aaaacaagct | 2950 |
aagtcaatca ggcttccaag tcaaagttca cctgttgaaa acttgatgaa | 3000 |
gaatatgatc taataaacta gtttcgcagg actgtaacaa tcatgaaaaa | 3050 |
taaaagattt aactgattga ggttttctat ataatggcaa agagtagcat | 3100 |
tgatgagtga ccatcctgag tttgagtaga gtcatatatt gatggggttt | 3150 |
ttgtattgtg ataaccatgg agtggtgttg tgtgcagTTG AGTGGTGGAG | 3200 |
AGAAACAAAG AGTGGCACTT GCTCGGACAT TTTTGAAATC CCCTGCGATT | 3250 |
CTgtaagtaa ctttgcacag aagcagcatt gagtttactt atgtgattat | 3300 |
gtacgtgtct agtcctcaca tacatagaga tggttggtgt acacagGTTG | 3350 |
TGTGATGAGG CAACGAGTGC GCTGGACAGC ACAACAGAGG CAGAGATACT | 3400 |
GAACGCACTC AAGGCACTAG CGAGTAACAG GACATCTATC TTCATTGCCC | 3450 |
ACAGGCTGAC CACTGCGATG CAATGTGACG AGgtttgtag taaatagtgt | 3500 |
ttgtcaactt agctcaaaga aacaatgttt ttgcataact gaaacttttg | 3550 |
gttgcgggca gATCGTAGTA CTGGAAAACG GGAAGGTGGT GGAACAAGGC | 3600 |
CCCCACGACG AGCTATTGGG AAAATCAGGG AGATATGCGC AGCTATGGAC | 3650 |
ACAACAAAAC AGCAGCGTGG ATATGCTTGA TGCAGCTATC AAATTGGAAT | 3700 |
AGtgaacctc agagccaaat gtgtaaaatt tatatttatc tcattgattt | 3750 |
tctatggagc ttatatagtt aatagagtcc caaagaacac aaaacaaagg | 3800 |
gaataataaa tagtggtgaa tgatataatt ttaacacgag tttttgttga | 3850 |
gcaagtaaac ttacgataaa aaaatgatca attttattag ttaaagccca | 3900 |
aataggccca actagttatt aattaattaa caagaagaag tccgtgattt | 3950 |
cgaaattcaa acgaagcgcc atttctttct cctcctagga aactctgcaA | 4000 |
TGGCCATGGC CTATGAGGAA GCTCGCAAGC TCCGTCTTCA AGAGAATCAC | 4050 |
AAGCGATTTC AAgttaccct tcatcgttac cgcgtttctt cttctcctcc | 4100 |
ttctctgatt cgtttatcaa ttttgattat tgaatctcag gatttaggaa | 4150 |
tttcccagat ttctaagact ctgactcaga ttacaaagaa aacgcctcag | 4200 |
gtttcgtgtt ttttccttcc atttctgctt cattcctagT CCAATTTTGT | 4250 |
AGCTTTACCA CAATTTCAGC TTCTTCAGCA GCGTAATCAC AAACCCATCG | 4300 |
ATAAAGCCCT CTTAGCTACT GCTGAACCAA GACGCTCTTC CCGTGTTCGT | 4350 |
ACCGTAATTT CTTCCTATCG CGATGATgta attttcccag ctttctctta | 4400 |
cttctgtaat agatttttca cagcaatcaa tcaacccaat cccttgtctc | 4450 |
ttttcagGTC GTCGTAGACA CTGGTCGTAC TTCGAATCTG AGGAGATCGC | 4500 |
GACATAGCTC TACATGGGCG ACgtaagtgc cctgctccac aattttgccc | 4550 |
taaaaaacta tcctttcatc tgatcaatta gttaaaattc atcagCTACA | 4600 |
TTTCTCGACC TCTCCATGAG TGCAAGTTTG CATCTTATGA AGAAAAGGTT | 4650 |
GGAGCATTCA AGGCTGCAGA GAAGTTCCAG AGGAGCCTTA AATCTCCACA | 4700 |
TCCTTACTTT GTGAAATCTA TGGTTCGCTC CCATGTTTAC AGTTGCTTTT | 4750 |
GGCTGgtacg ttcgttcaca acacttgtgt gtgtttcttc ttcaaggatt | 4800 |
tcgtgttagt accttacttg acctacatgg gtttgcttgc aaatttcaag | 4850 |
GGGCTTCCTT CAAGATTCTG TGCAGACAAT TTTCCTGAGG AAACTATGGA | 4900 |
AATAGAACTA GAGGATGAAG AAGGCGAAGT GTATGAAGCA GTGTACATTG | 4950 |
GTAGAAGAGC TGGACTCAGT GGTGGTTGGA AAAGGTTTGC TCTTGATCAT | 5000 |
AAATTGGATG ATGGTGATGC TCTACTCTTT GAATTGGTTG AACCAAAGAA | 5050 |
GTTCAAGgta tgtatgtgtc ttgaacaaga gtcatgtggt tggagttagt | 5100 |
tgacattctc acatgttgat tataaaatgt ttgcttggtg cagATCTATG | 5150 |
TGTTTAAAGG AAATGAGAAC GCTAATCTTA CAAGCGCCAG AAAGAGAGGC | 5200 |
AGAGCAACGA CGCCAAGTGA AGAAGAAGAA GAAGAAGAAG ATAAGGATGT | 5250 |
TGAAGAATCA GGTGATGAGG AACACAGCTC AAGAGCCACT AAGAGATCAT | 5300 |
CCGTAAGGTT ACTAAGGAAG AGGAAAGCAT AAgagagctt tcttttgtct | 5350 |
acatgcccca tatatttttt tggtttttga gtgggctgct aatactacta | 5400 |
atactaatgg catatttgta agtttatcaa cccaaggtaa actttgtttt | 5450 |
tttcaatttg aaagtagaac tgaaactctg atgagcggct ttggttcgga | 5500 |
aatttaaatt gtttcctctc agttttggtt actaggcgat gatgagctat | 5550 |
atacttctga tgataccatt tagaccaact ccgtcacaaa ataaacaaat | 5600 |
taaaatggag agagtaaacg ggctattaaa tatcaaaact gggccttact | 5650 |
atgacaaaag gcccatttaa tctattttcc ttttatttag atgagtcggc | 5700 |
tcacaaatta acatttcttt tcctctactc caaagatatc tcggttcgca | 5750 |
aaagtctatt taatttcata gcaatctcac ttttctcttc ccccaccctc | 5800 |
aaagatctct caaagaATGG CTTCCGCGGC TGTTGCATCG ATGGTTCTTG | 5850 |
ACCCTAAAGC ATCACCGGCC TTGATGGATC TATCCACCGC AGACGAAGAA | 5900 |
GATCTCTATG GCCGCCTCAA ATCGCTTGAA CGACAACTAG AGTTCACCGA | 5950 |
TATCCAAGAA GAATATGTGA AAGACGAGCA AAAGAATCTC AAACGAGAGC | 6000 |
TGTTACGAGC ACAAGAAGAG GTCAAACGAA TTCAATCCGT GCCTTTGGTG | 6050 |
ATAGGTCAGT TCATGGAGAT GGTAGATCAG AACAACGGCA TCGTCGGATC | 6100 |
TACTACTGGC TCCAATTACT ATGTCAGAAT TCTCAGCACA ATCAATAGAG | 6150 |
AACTCTTAAA GCCTTCTGCT TCCGTCGCTC TTCACCGTCA CTCCAACGCC | 6200 |
CTTGTTGATG TTTTGCCTCC GGAGGCTGAT TCTAGCATCT CCCTTCTCAG | 6250 |
CCAATCTGAG AAGCCTGACG TCTCCTACAA Tgtaatgttt ccttttttcc | 6300 |
aaatctcgac tctgttttct gaattaaagt tagggttttt gaaacgatct | 6350 |
ttggtttctt atgtggtgct ttatcttttt gtgtagGATA TTGGAGGATG | 6400 |
CGATATTCAG AAACAGGAAA TTCGTGAGGC TGTTGAATTG CCTCTTACCC | 6450 |
ACCACGAGCT TTACAAACAG ATTGGTATTG ACCCACCTCG TGGAGTCTTG | 6500 |
CTCTATGGAC CTCCTGGTAC TGGAAAGACT ATGTTGGCTA AGGCTGTTGC | 6550 |
CAATCACACA ACTGCTGCCT TCATTAGGGT TGTTGGATCC GAGTTTGTGC | 6600 |
AAAAGTATCT CGGCGAGgta ttaaaaatca tagctttatt gaaggtttag | 6650 |
gtcctattga gcgattctat ttggtgacta actggttttt taattgcagG | 6700 |
GACCTCGTAT GGTTCGTGAT GTCTTCCGTC TTGCCAAGGA AAATGCTCCA | 6750 |
GCTATCATCT TCATTGATGA GGTAGATGCC ATCGCTACTG CTAGGTTTGA | 6800 |
TGCTCAAACA GGAGCCGATA GGGAAGTTCA GC | 6850 |