fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G60140 AP2/B3-like transcriptional factor family protein (.1)

>AT5G60140.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 264
PvuII CAG|CTG 105


Click here to view TAIR data

>AT5G60140.1 length:987
ATGAACACAA GAGGAAATTA CTCTAATGGT TTTACTTCAA AGTTCTTTAA 
50
ACCGTACCTT CCTAGTGAAT CCGGTGATGA TCTGGTACTA CCCATTTCTT 
100
TCAACAGCTG TTTACCAAAG TCTTTGCCTA AAACTGTAAC TGTTAGAAGC 
150
ATTTCTGGAA ACATTTGGAA ATTAGGGTTT AAGAAATGTG GTGGTGAGGT 
200
TGAGAGATTT GTTATGGTTA GTGGTTGGAA GAAGATTGTA AGGGACGAAA 
250
ACCTGAACGG TGGAGATCTC TTGTCATTTG AGTTTGATGG CTCTCATTTT 
300
TTTAATTTCT CTATCTTTGA CCATGAGACT ACGTGTAAGA GGCTTAAGAG 
350
AAGTTCAGAG CAAAGCAAGG ACATCATCAA AGTGGGATCT GATTGTGAAG 
400
AAGAATCTCA GGCTAGTGAT GATGTTATCG TTCTTAATAG TGATGATTCT 
450
GACGATTCTG ATAATGATTA TTCTGTTGAG GATGATAATG TTGCTGAGGA 
500
TGATGATGGT CTTGAGGATG AAGTAGATGT TGAGGCTGAG GATGGTTATG 
550
ATGCTAAGGA TAGTGATGGT CTTGAGGATG AAGATGATGA TGAGGCTGAG 
600
GATGGTTATG ATGCTAAGGA TGATGATGGT CTTGAGGATG AAGATGATCT 
650
TGAGGATGAG GATGACGAAA GGCGGTATCT GGATGATCAC GAGAACCCGT 
700
ACTTTACTAT GACACTCAAT CCGAAGAAGA AGAGCCAATT GCACATACCG 
750
GCTCATGTCA TAAGGGACTA TGACTTAACC TTCCCGGAGC GTATAACAGT 
800
CGTGGACGAA ATGGGAGCAT TGGAGAAAGC AATCAAGATT CAAAAGAATG 
850
GTTGCATCTT TGTCAAGGGA TTTGGTAGTT TCATCAGAAG GAACAAAATG 
900
AAGATGACTG ACAAAATGAT ATGCGAGCTT AAGAGGACTG GAGGTAATCT 
950
GGTTCACACC ATCAAGGTCA AGATTATCAG CGGATGA
1000

>AT5G60140.1 longest ORF length:328
MNTRGNYSNG FTSKFFKPYL PSESGDDLVL PISFNSCLPK SLPKTVTVRS 
50
ISGNIWKLGF KKCGGEVERF VMVSGWKKIV RDENLNGGDL LSFEFDGSHF 
100
FNFSIFDHET TCKRLKRSSE QSKDIIKVGS DCEEESQASD DVIVLNSDDS 
150
DDSDNDYSVE DDNVAEDDDG LEDEVDVEAE DGYDAKDSDG LEDEDDDEAE 
200
DGYDAKDDDG LEDEDDLEDE DDERRYLDDH ENPYFTMTLN PKKKSQLHIP 
250
AHVIRDYDLT FPERITVVDE MGALEKAIKI QKNGCIFVKG FGSFIRRNKM 
300
KMTDKMICEL KRTGGNLVHT IKVKIISG
350