fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G60140 AP2/B3-like transcriptional factor family protein (.1)

>AT5G60140.1 genomic map

>>Show CDS map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, KpnI, NcoI, NdeI, NheI, NotI, PacI, SacI, SalI, SmaI, SpeI
Name Recognition sequence Cut positions
BglII A|GATCT 1109, 1267, 1769, 1907, 4519, 5025, 6311, 6770
EcoRV GAT|ATC 91, 1220, 2642
HindIII A|AGCTT 397, 5388
HpaI GTT|AAC 2787, 3296
PstI CTGCA|G 5619
PvuII CAG|CTG 3026, 4360
StyI C|C[AT][AT]GG 3854, 5925
XbaI T|CTAGA 5592, 6314
XhoI C|TCGAG 3101


Click here to view TAIR data

>AT5G60140 genomic sequence (4103-4115,4198-4268,4340-4996,5132-5377,) length:6876
gatgttgttg tatgcacatt tgcaggtctt ttcagggtgc aagatggtta 
50
aggtaaacaa gcaaaaagaa cacaaacaag acctgcaaag gatatcaaga 
100
ttgcctatac actcagtact caaagtaaga aaaggatatg aagatgaagg 
150
aggaggccgg ggacagccac tgcgcttgga accactcctt aaatcctgag 
200
ctgagataac ttttttctgg gcctataatg cagatattcg acatttagat 
250
agactgcgcc tcaaaatata tatatttacg caaggaaaga aacgacttat 
300
gaccctcatt agctccacaa tatttaggtc cagtaaactc accgaggaag 
350
attgggattt agatggtgat ccgtacTTGG GCATTATGCC ACTGACAAGC 
400
TTCTTCTCTC TGTTTTTACT ATTCACAGGC AAGTCGTTAA ATAAGTTTTC 
450
TTCAAGTGCT TGTAGTCCTG GTGAAACATT ACATTTGGAA GCTGACATTG 
500
ACTCTCTGTA CTCTTCCTGA ATGGCAGCTA ACCGATCTCC ACCAAGATGG 
550
CAAGCAGTTC CAGTTATTTT AGATAACTCA GATGAATCCA AAACACctgg 
600
ttcatgacca tatcacacat cttaagattc ttagtaacat agaccaaatc 
650
tttgaccttt actactaaca ggaaattggt aaaaaaaagt cacCTTCTTC 
700
CGTTGAAAAA GCTCTATCCC ATGCTAAACT CTTGCGCAAA TTAAACCCTG 
750
CATTCTTTTT CTTCTTCTTC ATCTGTTGTC GCTCCACACT CAATTTGGGC 
800
AATTCAACTT TAGCATTCTC CTTTCCTACA CTATCTGTAT CAACTGAAGC 
850
GCATGGCTGC TCCCTGTTGT TGCTGGTGCC TGTTACTCTT Cctgcaaaaa 
900
gtattaacct tcatatatcc gcagaataca caacatttat actaatttgc 
950
tattttatca aattaagatt taaacaatgc taattcagat gcttaaacac 
1000
tctaacaaag ggagagagaa attatcagaa cgaagctcgg atcgagaacg 
1050
agaaattgaa gcgcttacCA ATTGGGGAAA AAGGAGGCCG AGTAGGAACG 
1100
ATACGACTAG ATCTAGGGAT TTGGAGAGGT GAGCATTTCA AATAACTCTT 
1150
TCCTCGGCTC GAATTAGTTT TCTTCGGCGT ATTCTTCAGA AGCCAATTAT 
1200
CTTCGTCGTC TTCTCCAGAG ATATCTAAGA GATCCTTATC CATttctagc 
1250
ttctctttcg agcccaagat ctgacgatta ggaaatccgg aatcctatag 
1300
ctaggttttt tcaaacttac actgagaaaa tctcttcgga agttgtaggc 
1350
gaaaatccta gtcggtaaat cggaaattgt tcggccgatg gaagagacga 
1400
ctgttgatag aatatcccgg cctcgtaagc gggaagaggt tgaaaaactt 
1450
gaaattgaaa gaagatcgga ccaacgttct ctataatctc aggttattat 
1500
tgtcatttaa agcaaatcga ttgggccgga ctttaaagcc catttatttg 
1550
aattttaaat tctcgttcac cctttattgg tttggtttgg ttaggataat 
1600
attttttcgg tttgattaaa atcatatcgg ttcggttcat ggagcattga 
1650
agtaaaagta gttagcacat gttttatttt tccatttgta gcaataagcc 
1700
tagaagacaa tacagtctct gtgttatgct acaaaaggca aaatctctaa 
1750
agcaaaccaa aagatcggag atctattaac aaagctcttt tacttttcta 
1800
ttttcaagaa ccattttcac cttcactttc actaaaagag ttagggtttc 
1850
aaagaggtga agATGATGAA CAGAGgtttc ttctttagac tcttgttttt 
1900
atgttaagat ctttatgcta ttgtttgttc ttgattctcc aatcacataa 
1950
cctatcctat gttctgattt ttttcttgct ttggaacagG AATTTCTGTG 
2000
GATGATTGTC TTCCAAAGTT CTTCAAAGTG TACTTACCTG ATGATTCCGG 
2050
AGATGATTTG gtaaaaatac acttctctct ctgtttttgg ttatatgtag 
2100
atttttagtt tattgaaact tttagatcct tcctcttcag GAATTACCCA 
2150
TCTCTTTCAA CAGCTTTTTA CCAAAGTCGT TGCCTAAAAA TGTAATTGTT 
2200
AGAAGCATTT ATGGAAACAT CTGGAAAGTG GCGTTTAGGA AGTTTTGTGG 
2250
TGATAGTGAG AGATTTGTTA TGGTTAATGG GTGGAAGAAG ATAGTCAAGG 
2300
ACGAAGATTT GAAAGGTGGA GAGTTCTTAG AATTTGAGTT TGATGGCTCT 
2350
TGGTGTTTCA ATTTCTGTAT CTATGGTCGT GCAACGTGTA AAAGGCTTAG 
2400
AAGTTCAGTG CAAATCACGG TTCTTGATGA CAATGATGAT GGTTTTAATG 
2450
ATGATCAAGA TTATGGGGAA GAAGTTAAAT CTAGTGAAAA TTTCATAGTT 
2500
CTTGATGATG ATGATATTAG TGATGTTCAA GATTATAATG AGGAAGATAC 
2550
ATCTAGTGAA GATATTACAG CTCTTGATGA TGCTGATAAT GATGATATTA 
2600
ATGATGTTCA AGATTATGTT GAGGAAGATA CATCTAGTGA AGATATCATA 
2650
GTTATTGATG ATGATGATGA TGATGATGAT CAAGATTATG GTGACGATGA 
2700
TCATGCTGAT gttgagaaag aaagatggag aggagtcaaa acagagaaaa 
2750
aaaagaaagg tataatagaa acttttgtct tgtgaagtta actgagactg 
2800
agagcatcac tgtcttttta ttttcttgcg tataaatttt gataggttct 
2850
tctggagagc atgacagaca atatctggat aatcacatga accctttctt 
2900
tacagtgaac cagcatcggc aaataaaata taatatggta agaaatgtga 
2950
agaaagtctc atgtcttttt gcattttcat taaaataatg taccacttct 
3000
gttttatgat gttatctttg taatgcagCT GCGCATACCA ACTAAGGTCA 
3050
TAACGAAGTA TGGCTTACAC TTCCCTGAGT TCATCAATTT GATTGATCCA 
3100
CTCGAGAAAA ACTTTGGTAA ATTGAAGAGG AAAGTTAAGG GTCAAACAAT 
3150
CAAGGGATTC CGTAGTATAA TCAGAAGGAA TAATGTGAAG TTGAATGACA 
3200
AGGTGATTTG TGAGTTAGAA AAGGAGATGG ATGGTCTTGT TCGAGAAATC 
3250
AAGGTCCATG TTATAAGAGG ATGAtctctt gataaggctt tatgcgttaa 
3300
ctccaagaca ttatctattt ttacttgaga gtttttatat gagtagagta 
3350
cttggtttta tgaatcttat tggttttctc ggaacataat cgatgttgat 
3400
gctttctata cacttcttga ttttgtttgt ttgtctgaaa catgaagtgc 
3450
aaaagacgat caacacagtc ttacaataat aatgtatact agagctatag 
3500
attttgggag aaatcattat gaatggttca cacatcaggg ctgtttaaaa 
3550
cctgcgagtt catgtaaaaa gaatgttatt actctctatg tgatcataag 
3600
aaaagcattg gcataggagg agaataatac taagatactt ggaactctgc 
3650
cacttaacac tatctcattc ttctttcaag tttcaagttt cttgttcaag 
3700
aattgagatg tcacaagtcc ttctttctct aatataccct tctcgactct 
3750
ttactgtggt tcttttgttt aaggacgata atgtcattta cacgatatag 
3800
attgaaccaa acttaaggcc catttcttgt tttttgtttg ggccttagcg 
3850
ataccttggt ccgcttaacg aattattttt gaataagaag agtactatta 
3900
atggtttgtt ttccatttga aggaaaaagc atcgaaacag agagaaccct 
3950
ctgtttttgc aagtttttgc tacaaaaggc caacaccttt agatcaaatc 
4000
acatctggaa aaacttggat ctggagaaac tttgttcacc tttttatttc 
4050
cgatcaaaat tagggttcag agtatttcca agagcacaag aagttgacga 
4100
caATGAACAC AAGAGgtttt tcacttctct gttcctgatt cttcccttgt 
4150
aatgtgctct gtacattgat gttcttcctt ttcttatttt ggaacagGAA 
4200
ATTACTCTAA TGGTTTTACT TCAAAGTTCT TTAAACCGTA CCTTCCTAGT 
4250
GAATCCGGTG ATGATCTGgt aataaaacac acttctcttc actctgtttt 
4300
ttgttttctg gttgcttgaa atttgtagaa acttttcagG TACTACCCAT 
4350
TTCTTTCAAC AGCTGTTTAC CAAAGTCTTT GCCTAAAACT GTAACTGTTA 
4400
GAAGCATTTC TGGAAACATT TGGAAATTAG GGTTTAAGAA ATGTGGTGGT 
4450
GAGGTTGAGA GATTTGTTAT GGTTAGTGGT TGGAAGAAGA TTGTAAGGGA 
4500
CGAAAACCTG AACGGTGGAG ATCTCTTGTC ATTTGAGTTT GATGGCTCTC 
4550
ATTTTTTTAA TTTCTCTATC TTTGACCATG AGACTACGTG TAAGAGGCTT 
4600
AAGAGAAGTT CAGAGCAAAG CAAGGACATC ATCAAAGTGG GATCTGATTG 
4650
TGAAGAAGAA TCTCAGGCTA GTGATGATGT TATCGTTCTT AATAGTGATG 
4700
ATTCTGACGA TTCTGATAAT GATTATTCTG TTGAGGATGA TAATGTTGCT 
4750
GAGGATGATG ATGGTCTTGA GGATGAAGTA GATGTTGAGG CTGAGGATGG 
4800
TTATGATGCT AAGGATAGTG ATGGTCTTGA GGATGAAGAT GATGATGAGG 
4850
CTGAGGATGG TTATGATGCT AAGGATGATG ATGGTCTTGA GGATGAAGAT 
4900
GATCTTGAGG ATGAGGATGA CGAAAGGCGG TATCTGGATG ATCACGAGAA 
4950
CCCGTACTTT ACTATGACAC TCAATCCGAA GAAGAAGAGC CAATTGgtaa 
5000
gagaaaaaaa aacctgaata tttaagatct ttacacactc tccatttaac 
5050
atctttggtt atggattctt atgtgaataa attaataagg aatatctcaa 
5100
tctgttttat gatgtttgtt tcttgatgca gCACATACCG GCTCATGTCA 
5150
TAAGGGACTA TGACTTAACC TTCCCGGAGC GTATAACAGT CGTGGACGAA 
5200
ATGGGAGCAT TGGAGAAAGC AATCAAGATT CAAAAGAATG GTTGCATCTT 
5250
TGTCAAGGGA TTTGGTAGTT TCATCAGAAG GAACAAAATG AAGATGACTG 
5300
ACAAAATGAT ATGCGAGCTT AAGAGGACTG GAGGTAATCT GGTTCACACC 
5350
ATCAAGGTCA AGATTATCAG CGGATGAtct cttcactaag cttttgtgag 
5400
tcttatgtgt cttagctgtg agtggttttt attatgttac taatggtaaa 
5450
atgtctatct taggatttgg tttataacta aggatttggg cgtgagagat 
5500
gttttcatgt tgaattaaga ctttctatat agagttcatg tctcattaaa 
5550
tctctctgtt ttctcttgca acaaactctt gagttatgcc gtctagacaa 
5600
atcttgttgc tttgttgcct gcagtaagta gggcaacgtc ctccaacgga 
5650
ttcatacaaa tagtacttac attgttcgga caaaggtcgt cctttgtgtt 
5700
ggagtaatct caaaagacat tatagtaaaa tgacaaatgg gtttgggttt 
5750
gtgttttgtt gttggcacca cttttgtata caaacttaca aatcaaaata 
5800
agaaagagaa ccaaacaata tgttgcaaat agatttggag gaaatcacta 
5850
ggccttccac tgactactat aaaaccccat ctcgaatggg accaaaataa 
5900
tttaggtcca ttggttttcg cgggccttgg ttctttcacg aatcttcttt 
5950
taaaacgaag tcgttctaag tagtctttta cggttttacc atttgaagca 
6000
acaagtatag aaacagagag aaacctctgt tttcaagttt ttgctacaaa 
6050
agtcgaaagc cactcaacgg aaaccgtact atctgagaaa tctggggttt 
6100
gaagaactgt actcatctta aaattagggt tccaaatctc agctctacat 
6150
tgaagtaaat gtagttagta aagttttttt tttccatttg aaacaataag 
6200
cgttcaagtc tctgctttta gctacaaaag gaaaaaaaca ctaaatcaaa 
6250
caataagatc ggagaacgca tattaacctt cagttaaatc aaacaattag 
6300
ggtttcacag agatctagac aaagagcaga cagaagtgaa gatgaacaaa 
6350
ggtttcttct tttttgttct tgattctaca tttacacaat gtatcctctg 
6400
ttttgatctt ttcttgctat cgaacaggag tttctttgga taattgtgtt 
6450
ccaaaattct tcaaagttta cttacctgat gagtccggag atgatATGgt 
6500
aaaacactct tctcttctct ctgttttttt tgtgggtttt tctgagatgt 
6550
tcttctgtag atttctattt ggttgaaact tttagattgt ataatgcagG 
6600
TACTACCCAT TTCTTTCACC AGATTTTTAC CAAAGTCTTT GCCTGAAACT 
6650
GTAACTGTTA GAAGCATTTC TGGAAATATT TGGAAATTGG AGTTAAAGAA 
6700
ATGTTGTGGT GATGATGATA CTGAGAAATT CGTTATGGTT AATGGGTGGA 
6750
AGAGGATTGT GAAGGACGAA GATCTCAAGG GAGGAGATTT CTTAGAGTTT 
6800
GAGTTTGATG GCTCTAGTTG TTTCCATTTC TGTATCTATG AGCATAGGAC 
6850
AATGTGTAAA AAGATAAGAA GAAGTT
6900