fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G60480 ATHB26, ZHD12 ZINC FINGER HOMEODOMAIN 12, homeobox protein 26 (.1)

>AT5G60480.1 CDS map

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Uncut enzymes: ApaI, AscI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 497
PstI CTGCA|G 217
PvuII CAG|CTG 214


Click here to view TAIR data

>AT5G60480.1 length:576
ATGGTTGTCT TGTACAACGA GTGCCTTAAA AACCACGCGG TCAGTCTCGG 
50
AGGCCACGCT CTTGACGGCT GCGGTGAGTT CACACCAAAG TCAACCACCA 
100
TCCTCACGGA CCCTCCGTCC CTTAGGTGCG ATGCTTGTGG CTGCCATCGC 
150
AACTTCCACC GTCGTAGTCC TTCTGACGGC TTCAGTCAGC ACCGGTCACC 
200
ACCGTCTCCG TTACAGCTGC AGCCACTCGC CCCTGTTCCG AACTTGCTTC 
250
TCTCTCTTAG CTCCGGTTTC TTTGGACCCT CGGATCAAGA AGTCAAGAAC 
300
AAATTTACGG TGGAAAGGGA TGTTAGGAAG ACTGCGATGA TTAAGAAACA 
350
TAAGAGGACG AAATTCACGG CGGAGCAGAA GGTGAAGATG AGAGGTTTCG 
400
CGGAGAGAGC GGGGTGGAAG ATTAACGGCT GGGATGAGAA GTGGGTGAGA 
450
GAGTTTTGTA GTGAAGTTGG AATAGAGAGA AAAGTTCTTA AGGTTTGGAT 
500
CCACAACAAT AAGTACTTTA ACAACGGGAG GAGCAGAGAC ACGACGTCCT 
550
CTATGTCTTT GAATTTGAAG TTGTAG
600

>AT5G60480.1 longest ORF length:191
MVVLYNECLK NHAVSLGGHA LDGCGEFTPK STTILTDPPS LRCDACGCHR 
50
NFHRRSPSDG FSQHRSPPSP LQLQPLAPVP NLLLSLSSGF FGPSDQEVKN 
100
KFTVERDVRK TAMIKKHKRT KFTAEQKVKM RGFAERAGWK INGWDEKWVR 
150
EFCSEVGIER KVLKVWIHNN KYFNNGRSRD TTSSMSLNLK L
200