fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G60480 ATHB26, ZHD12 ZINC FINGER HOMEODOMAIN 12, homeobox protein 26 (.1)

>AT5G60480.1 genomic map

>>Show CDS map




Uncut enzymes: ApaI, AscI, EcoRI, KpnI, NheI, NotI, PacI, SalI, SmaI
Name Recognition sequence Cut positions
BamHI G|GATCC 4496
BglII A|GATCT 4574
EcoRV GAT|ATC 1657
HindIII A|AGCTT 2247, 5218, 5377
HpaI GTT|AAC 3503
NcoI C|CATGG 1178, 1466, 3570
NdeI CA|TATG 986
PstI CTGCA|G 1095, 1763, 4216
PvuII CAG|CTG 4213
SacI GAGCT|C 3906
SpeI A|CTAGT 885, 3878, 5059
StyI C|C[AT][AT]GG 1178, 1466, 1564, 3570
XbaI T|CTAGA 5975
XhoI C|TCGAG 1557


Click here to view TAIR data

>AT5G60480 genomic sequence (4000-4575,) length:6075
aattcatatc tattgtattt actatttaga ataacaacag ctcctaactt 
50
atgctcgctg tgactttagt taattataaa attcaatata gaagaaaaga 
100
actgattttc atcttatttc attatacggg tatatataag aactttttca 
150
taacgaaatg gaatgtaaac catgtgtaat cgatcgactg aaaaagaaat 
200
gtacgttgtg gtcttattgt ttagtcaact ttttgaaaca gtagaaaagt 
250
ccaaaagttt aaagtttgtt cacacctcat gcatacacaa tcatacaaga 
300
tatatgcaaa attttctatg tctatatatt acaaaaaatt gatgttctag 
350
taatgtctaa ttcttgagtt atatatatag attaaggata accatatatt 
400
attctcatat tattattttt aaaatattaa gtcatgataa taatatgtta 
450
ttttgactaa aacgatatgc taatatacta ggaatgaaaa cattaatttc 
500
aaaacaaaaa ttataaatta gaattatata agatttgtgt taaactatga 
550
tgagaatggt ccagtactgt gagtccatga cttaccgact tgtaatagaa 
600
cagttgtgtg taaagagaga agagagatgc cgtcttcggc agcctcttct 
650
ttttggtgtc atactcttca caagtgatca aaacctcact cacccatcac 
700
aatctcttaa acataaaaat ccaaaaagaa agtttttcta ccaacgacca 
750
aaaactaaaa aaaaaaaaaa ctttctaaaa cttcaataat atccccactt 
800
ttcagcccat aagaaaatat tttgatttag tttttatatg tcacaaagat 
850
gtagtgtcat tagatagata atcaagacat tattactagt tttcttcttt 
900
catttctctc tttctgtctt cttgcttgtt taagtggaga actctaagac 
950
aaactaaact attttttttt ttttgtctct tcttacatat gaatcaagac 
1000
atgatgattc cacataatcA TGACCGCCTC TCATTCTCTA GCTTTGTCCA 
1050
TGACCAAGAG CACATCACCC CTAATCCTTA CCCTAACTCT CAGCCTGCAG 
1100
CCTCCACTAA AACACCCAAG AAAAAGAGAA ACCTTCCAGG AAATCCAGGC 
1150
ATgtgtatat ataattttat atgttctcca tgggtcttta ataaagctct 
1200
agcttgatgt gttttcatca aaatcaataa tctttttcca agtatagatc 
1250
ctttgtgttt tcttttttct ttcttgatac tgttttattt ttattggttc 
1300
taattttgtt tctaacaaca acaacaaaaa acagATCCAA ATGCAGAAGT 
1350
CATCTCTCTA TCTCCAAAAT CCCTCATGGC GACAAATCGG TTCTTTTGTG 
1400
AAATTTGTAA CAAGGGGTTT CAGAGAGAAC AGAACCTTCA GCTCCACAAA 
1450
AGAGGCCACA ACCTGCCATG GAAGCTGAAG CAGAAAACGA ACAAGAATCA 
1500
GGTGAAGAAG AAAGTTTATA TATGCCCTGA GAAGAGTTGC GTCCATCATG 
1550
ATCCAGCTCG AGCCCTAGGA GACCTTACTG GAATAAAGAA GCACTTTAGC 
1600
AGGAAACATG GAGAGAAGAA GTGGAAATGC GATAAGTGTT CCAAGAAGTA 
1650
TGCTGTGATA TCCGATTGGA AAGCTCATAA CAAGATTTGT GGTAGCAGAG 
1700
AGTTTAGATG TGATTGTGGT ACTCTTTTCT CCAGgtcatt actactcttt 
1750
ctacgtcttc gtctgcagca ttatcgtttg ccttaacatg ttcatatatc 
1800
aaacattttt aaaaattgta acaacggaaa aaacgttttc aaatcttcag 
1850
gtttgcattt atttgaagtg tttgataaaa atataaatat aaacgtaaaa 
1900
cacaaaacat atttgaatta tatttgaaac aaaccgggtc ttataattgg 
1950
acatcgaaac agatgcatgc atacataaaa gcatgatatt gcctatgcta 
2000
gaaaaataaa aagttattga gtttacttta tgtatagcga gtacgttggt 
2050
ctttggctcg tagcttgtca tttggatacc actaccgtta attatttctt 
2100
ggcttctctg tgtcttggtc cagtttgtag ttttatagag acaccaatat 
2150
cgaggagaaa aaaggctgca tgactaggac atgatgtggt catgtctcca 
2200
tagccttgag tctttttttt ttcaccttac tacacatatc gattataagc 
2250
ttgcatcgaa taaagagttg catatatacc atatacaaga agacctattt 
2300
taatttaatt tatatgttac caattagcct atattaacat agttacttta 
2350
ttgaatgatt tggttgattg taccagGAAG GACAGTTTCA TCTCACATAG 
2400
ATCCTTCTGT GATGTCTTAG CTGAAGAAAG TTCTAAATTC TTCTCAGTTC 
2450
CTTCACCATT AGCCGCCAAT TCGACCATCG CCACTGTCAC TGATACCAAC 
2500
AATCCAATTC TCATTCAATC ACAATTGGAT CAATCTTCCA CAGGTACGGC 
2550
CGATCTTAAC GTCAACAACA ATCACACCAC CCTATTTGGA CAAAAGTTCA 
2600
CCAACTCCAA CCCAACCCAA CAACAACCCA ATGCTTTGGC GTTGTCCTCA 
2650
CCACCATCAC CTCGTAGTAC ATCTGATTCG GTTCATAATC TATGGAAGTT 
2700
ACAAGAAGAG GAATGTGCAC ACCAGTGGTT ACTCAATGAA TATATGAACA 
2750
ATAACAAAAA CATATTCCAT AAGGGAATAT TCAAGAATCA AGAAGATGAG 
2800
ATAAAGAAGG GAAATATCTA CAGCGGCTCA AACCCAACCG ATGGAAACAT 
2850
AGCATCCTTG TTCTCGTATA ATCAAGAAGC AGTGAATATG GCTTCATTTT 
2900
CGGCAACAAC ATTGCTTCAA AAGGTAGCTC AAACGGGAAC ACCATCAAGC 
2950
TCCGAAACTA GCACCACCAT GTTTGGGCAA ATGACTTCCT CCATCTTCAA 
3000
CAATACGATG CTAAACTCCT ATTGTTTAAC GGCGAAGAAT AATGAAGAAG 
3050
AGTTGACCAG AGACTTTCTT GGTGTGGGAA GTAGTGAGGA CCAACAACGT 
3100
CTACATCGTC ATCGCTTCCC ATCAAGCGTG CCATTGACGG CGAACCATGA 
3150
TATTCCCAAG TTGGCCGCAA CCATTGTAGG CAGGAAGCAA CCATAGacat 
3200
ggcgtcatct gattctgaaa ttactcgttt ttgttgacat gcaaggtaat 
3250
taaagataga aaaactatct ccacaagttc tttagaaaaa ctatagaaca 
3300
aaaacctgaa gcgataattt gtttacaaaa taatatgtac gtggaagtgt 
3350
attgtttaaa tctaaaaatt ttatttatat attttctctc attggagaca 
3400
acgtatggga tgggagctag atgcgagaca accatccaca acaataggag 
3450
aaaagcgtag atcacgagag aatttctgag tcaactcgat ttagtagacc 
3500
aggttaactc ggttgacaaa gattgaaagt tatttggccc cacgtgccac 
3550
catgcataga gaaacctaac catggatcat gcatgaaatt cgaaatctct 
3600
tttcttgcag aaacgtaagg tttttatcct cccccccaaa aaaaaagaaa 
3650
cgtaaggttt ttatataatt cttaagcgtt ttcagatttg attaatcatg 
3700
actgaaaaca cgcatctcat tcttcttgtc tttttaaaaa gtttccaaac 
3750
taatgctaaa taataggatt atttactaat ccaaattgca atcaacaatg 
3800
ttatttatat aaacctattg gacaaaatct ctccctttat gtcattgaca 
3850
acatttccag aaacagagta taaacgcact agtgagtgaa ataagaatca 
3900
gacatgagct cgttatcaaa accaaacaga caatttttgt caccaacaac 
3950
aaacaaccaa gacaccggca gagaacaaac aatcgcctgc gcccgagatA 
4000
TGGTTGTCTT GTACAACGAG TGCCTTAAAA ACCACGCGGT CAGTCTCGGA 
4050
GGCCACGCTC TTGACGGCTG CGGTGAGTTC ACACCAAAGT CAACCACCAT 
4100
CCTCACGGAC CCTCCGTCCC TTAGGTGCGA TGCTTGTGGC TGCCATCGCA 
4150
ACTTCCACCG TCGTAGTCCT TCTGACGGCT TCAGTCAGCA CCGGTCACCA 
4200
CCGTCTCCGT TACAGCTGCA GCCACTCGCC CCTGTTCCGA ACTTGCTTCT 
4250
CTCTCTTAGC TCCGGTTTCT TTGGACCCTC GGATCAAGAA GTCAAGAACA 
4300
AATTTACGGT GGAAAGGGAT GTTAGGAAGA CTGCGATGAT TAAGAAACAT 
4350
AAGAGGACGA AATTCACGGC GGAGCAGAAG GTGAAGATGA GAGGTTTCGC 
4400
GGAGAGAGCG GGGTGGAAGA TTAACGGCTG GGATGAGAAG TGGGTGAGAG 
4450
AGTTTTGTAG TGAAGTTGGA ATAGAGAGAA AAGTTCTTAA GGTTTGGATC 
4500
CACAACAATA AGTACTTTAA CAACGGGAGG AGCAGAGACA CGACGTCCTC 
4550
TATGTCTTTG AATTTGAAGT TGTAGatctc tttacagtga tgggtcttca 
4600
tcttcttgag ataaggaaaa accgaaacaa aaagaggtta cggtagtctc 
4650
tgatccgacc ggaatgtcac gtcagaaata taaattatct aagttttttt 
4700
aaaattaaaa attattatcc tagaagactt gtcattttgg gcataacttg 
4750
taacgatgga tcatgactca tgacatgtat atggatatgt attcgagtga 
4800
tattaagggt atttactctc tcttttttgt ttatatttat atataagtaa 
4850
gtatatagtg taacaatgct gtaaataata attcatgagt gagtaactaa 
4900
gaaaattgaa atatataggt aactggttaa tatataggag gaaatcagta 
4950
cctagttttt tttctttctc tacagtacta atcctagttt aaggagtaaa 
5000
aggtgaaaac aggatgtagt ctctatatag atacttccta cttgacacgg 
5050
ctactttaac tagtgacatt gagaaacaca ataacactcc ttttgaatac 
5100
aagatgtgac ccattctcgt tgacactaca aacgaatctc ctgaacttta 
5150
aaggcaagta gattttaact aataagatac gtgattagga tattatatgt 
5200
acatccattt aaggataaag cttcggtaac agccctcata taattgtcct 
5250
aaataaggat aatgcaattg tatctataca ctatattgtc ctaatacata 
5300
tatctttccg taaagagttg gctcttcaca cacatcttga acgaagcatc 
5350
tgatggtctt tattccttgt catcagaagc ttcttattgg ggtgatattt 
5400
aatggaagat tctttgacga aggaggagtc gtcacctata tgctgtttca 
5450
agtttcaaat tccaaattat aaagagattc gttttgttga ataattatta 
5500
aattgatcga ctggacttcc attttcccag atttgcaatc atgcatgtgg 
5550
caaaccaatt taattctttg acttaaatta aaatgaagaa cgaatttgtt 
5600
gctatagttg taggatggtt tttaaaaaaa taaatgtatt atcaatttat 
5650
actaacgcta gattaaactt tatagtattg gattttgtat ttgatcagta 
5700
gatcagaatt tttattgcaa aagacatata tatgaatggg tgaaatacaa 
5750
aataattcca tacaaatgaa tgtgattttt tatttgaaaa aatattaatt 
5800
ggatgctatt tcatcagaat ttttattgca aaagacatat atatgaattt 
5850
ttaatcattt ttattgcaaa agacatttat aaaatatcac actgtttcta 
5900
atgaaatagc atccaattat ttatttttca aataaaaaat cacattcatt 
5950
ttatgcaatt aattcggcta tctatctaga tgatatatag ttttatgttt 
6000
cgctaaccta tacgatcgat cattattatt taagcaactg gatcttgttg 
6050
aaagaaatgt gaaaatagga tcaaa
6100