fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G60850 OBP4, AtDof5. 4 OBF binding protein 4 (.1)

>AT5G60850.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 771
BglII A|GATCT 763
SacI GAGCT|C 113, 426
SalI G|TCGAC 561


Click here to view TAIR data

>AT5G60850.1 length:924
ATGCAAGATA TTCATGATTT CTCCATGAAC GGAGTTGGTG GTGGGGGAGG 
50
AGGAGGAGGG AGGTTTTTCG GTGGAGGAAT CGGCGGCGGA GGAGGTGGTG 
100
ATCGAAGGAT GAGAGCTCAT CAGAACAATA TACTTAACCA TCATCAATCT 
150
CTCAAGTGTC CTCGTTGTAA TTCTCTTAAC ACAAAGTTCT GTTACTACAA 
200
CAATTACAAT CTTTCTCAGC CTCGTCACTT TTGCAAGAAC TGTCGTCGTT 
250
ACTGGACTAA AGGTGGTGTT CTCCGTAACG TTCCCGTCGG AGGTGGTTGC 
300
CGGAAAGCTA AACGTTCGAA AACAAAACAG GTTCCGTCGT CGTCATCAGC 
350
CGACAAACCA ACGACGACGC AAGATGATCA TCACGTGGAG GAGAAATCGA 
400
GTACAGGATC TCACTCTAGC AGCGAGAGCT CTTCTCTCAC CGCTTCTAAC 
450
TCTACCACCG TCGCCGCCGT CTCCGTCACC GCGGCGGCGG AAGTTGCTTC 
500
GTCGGTTATT CCAGGTTTTG ATATGCCTAA TATGAAAATT TACGGTAACG 
550
GGATCGAGTG GTCGACGTTA CTTGGACAAG GCTCATCGGC CGGTGGTGTT 
600
TTCTCGGAGA TCGGTGGTTT TCCGGCGGTT TCAGCTATTG AAACTACACC 
650
GTTTGGATTC GGGGGTAAAT TCGTAAATCA AGATGATCAT CTGAAGTTAG 
700
AAGGTGAAAC TGTACAGCAG CAACAGTTTG GAGATCGAAC GGCTCAGGTT 
750
GAGTTTCAAG GAAGATCTTC GGATCCGAAT ATGGGATTTG AACCGTTGGA 
800
TTGGGGAAGT GGCGGTGGAG ATCAAACACT GTTTGATTTA ACCAGTACCG 
850
TTGATCATGC ATACTGGAGT CAAAGTCAAT GGACGTCGTC TGACCAAGAT 
900
CAGAGTGGTC TCTACCTTCC TTGA
950

>AT5G60850.1 longest ORF length:307
MQDIHDFSMN GVGGGGGGGG RFFGGGIGGG GGGDRRMRAH QNNILNHHQS 
50
LKCPRCNSLN TKFCYYNNYN LSQPRHFCKN CRRYWTKGGV LRNVPVGGGC 
100
RKAKRSKTKQ VPSSSSADKP TTTQDDHHVE EKSSTGSHSS SESSSLTASN 
150
STTVAAVSVT AAAEVASSVI PGFDMPNMKI YGNGIEWSTL LGQGSSAGGV 
200
FSEIGGFPAV SAIETTPFGF GGKFVNQDDH LKLEGETVQQ QQFGDRTAQV 
250
EFQGRSSDPN MGFEPLDWGS GGGDQTLFDL TSTVDHAYWS QSQWTSSDQD 
300
QSGLYLP
350